data_7P1K # _model_server_result.job_id ZD7HdpVEnkivyfVdE6oJkg _model_server_result.datetime_utc '2024-12-24 16:25:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7p1k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":805}' # _entry.id 7P1K # _exptl.entry_id 7P1K _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 887.128 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Phosphatidylinositol _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7P1K _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7P1K _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 M N N ? 3 N N N # _chem_comp.formula 'C47 H83 O13 P' _chem_comp.formula_weight 887.128 _chem_comp.id T7X _chem_comp.mon_nstd_flag . _chem_comp.name Phosphatidylinositol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 C2 T7X sing 288 n n O3 C3 T7X sing 289 n n C2 C3 T7X sing 290 n n C2 C1 T7X sing 291 n n O1 C1 T7X sing 292 n n O1 P1 T7X sing 293 n n O11 P1 T7X doub 294 n n O6 C6 T7X sing 295 n n C3 C4 T7X sing 296 n n C1 C6 T7X sing 297 n n C7 C8 T7X sing 298 n n C7 O13 T7X sing 299 n n P1 O13 T7X sing 300 n n P1 O12 T7X sing 301 n n O17 C10 T7X doub 302 n n C6 C5 T7X sing 303 n n C4 O4 T7X sing 304 n n C4 C5 T7X sing 305 n n C8 O16 T7X sing 306 n n C8 C9 T7X sing 307 n n O16 C10 T7X sing 308 n n C10 C12 T7X sing 309 n n C5 O5 T7X sing 310 n n C9 O18 T7X sing 311 n n C14 C13 T7X sing 312 n n C14 C15 T7X sing 313 n n C13 C12 T7X sing 314 n n O18 C11 T7X sing 315 n n C17 C16 T7X sing 316 n n C17 C18 T7X sing 317 n n C15 C16 T7X doub 318 z n C11 O19 T7X doub 319 n n C11 C31 T7X sing 320 n n C20 C21 T7X sing 321 n n C20 C19 T7X sing 322 n n C22 C21 T7X doub 323 e n C22 C23 T7X sing 324 n n C31 C32 T7X sing 325 n n C23 C24 T7X sing 326 n n C24 C25 T7X doub 327 e n C18 C19 T7X doub 328 z n C25 C26 T7X sing 329 n n C32 C33 T7X sing 330 n n C33 C34 T7X sing 331 n n C26 C27 T7X sing 332 n n C35 C34 T7X sing 333 n n C35 C36 T7X sing 334 n n C37 C36 T7X sing 335 n n C37 C38 T7X sing 336 n n C41 C40 T7X sing 337 n n C39 C38 T7X sing 338 n n C39 C40 T7X sing 339 n n C1 H1 T7X sing 340 n n C2 H2 T7X sing 341 n n O2 H3 T7X sing 342 n n C3 H4 T7X sing 343 n n O3 H5 T7X sing 344 n n C4 H6 T7X sing 345 n n O4 H7 T7X sing 346 n n C5 H8 T7X sing 347 n n O5 H9 T7X sing 348 n n C6 H10 T7X sing 349 n n O6 H11 T7X sing 350 n n C7 H12 T7X sing 351 n n C7 H13 T7X sing 352 n n C8 H14 T7X sing 353 n n C9 H15 T7X sing 354 n n C9 H16 T7X sing 355 n n C12 H17 T7X sing 356 n n C12 H18 T7X sing 357 n n O12 H19 T7X sing 358 n n C13 H20 T7X sing 359 n n C13 H21 T7X sing 360 n n C14 H22 T7X sing 361 n n C14 H23 T7X sing 362 n n C15 H24 T7X sing 363 n n C16 H25 T7X sing 364 n n C17 H26 T7X sing 365 n n C17 H27 T7X sing 366 n n C18 H28 T7X sing 367 n n C19 H29 T7X sing 368 n n C20 H30 T7X sing 369 n n C21 H32 T7X sing 370 n n C22 H34 T7X sing 371 n n C23 H36 T7X sing 372 n n C24 H38 T7X sing 373 n n C25 H40 T7X sing 374 n n C26 H42 T7X sing 375 n n C26 H43 T7X sing 376 n n C27 H44 T7X sing 377 n n C27 H45 T7X sing 378 n n C31 H47 T7X sing 379 n n C31 H48 T7X sing 380 n n C32 H49 T7X sing 381 n n C32 H50 T7X sing 382 n n C33 H51 T7X sing 383 n n C33 H52 T7X sing 384 n n C34 H53 T7X sing 385 n n C34 H54 T7X sing 386 n n C35 H55 T7X sing 387 n n C35 H56 T7X sing 388 n n C36 H57 T7X sing 389 n n C36 H58 T7X sing 390 n n C37 H59 T7X sing 391 n n C37 H60 T7X sing 392 n n C38 H61 T7X sing 393 n n C38 H62 T7X sing 394 n n C39 H63 T7X sing 395 n n C39 H64 T7X sing 396 n n C40 H65 T7X sing 397 n n C40 H66 T7X sing 398 n n C41 H67 T7X sing 399 n n C41 H68 T7X sing 400 n n C27 C28 T7X sing 401 n n C28 C29 T7X sing 402 n n C29 C30 T7X sing 403 n n C41 C42 T7X sing 404 n n C42 C43 T7X sing 405 n n C43 C44 T7X sing 406 n n C44 C45 T7X sing 407 n n C45 C46 T7X sing 408 n n C20 H31 T7X sing 409 n n C23 H33 T7X sing 410 n n C28 H35 T7X sing 411 n n C28 H37 T7X sing 412 n n C29 H39 T7X sing 413 n n C29 H41 T7X sing 414 n n C30 H46 T7X sing 415 n n C30 H69 T7X sing 416 n n C30 H70 T7X sing 417 n n C42 H71 T7X sing 418 n n C42 H72 T7X sing 419 n n C43 H73 T7X sing 420 n n C43 H74 T7X sing 421 n n C44 H75 T7X sing 422 n n C44 H76 T7X sing 423 n n C45 H77 T7X sing 424 n n C45 H78 T7X sing 425 n n C46 H79 T7X sing 426 n n C46 H80 T7X sing 427 n n C46 C47 T7X sing 428 n n C47 H81 T7X sing 429 n n C47 H82 T7X sing 430 n n C47 H83 T7X sing 431 n n # _atom_sites.entry_id 7P1K _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 Y01 B 1 1201 1201 Y01 Y01 . D 3 T7X B 1 1202 1301 T7X T7X . E 3 T7X B 1 1203 1401 T7X 2Y5 . F 2 Y01 B 1 1204 801 Y01 Y01 . G 2 Y01 B 1 1205 901 Y01 Y01 . H 2 Y01 B 1 1206 1001 Y01 Y01 . I 2 Y01 A 1 801 801 Y01 Y01 . J 2 Y01 A 1 802 901 Y01 Y01 . K 2 Y01 A 1 803 1001 Y01 Y01 . L 2 Y01 A 1 804 1201 Y01 Y01 . M 3 T7X A 1 805 1301 T7X T7X . N 3 T7X A 1 806 1401 T7X 2Y5 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 T7X . . . M 3 136.115 130.751 135.322 1 73.17 ? C1 T7X 805 A 1 HETATM 2 O O1 T7X . . . M 3 134.949 131.504 135.556 1 73.17 ? O1 T7X 805 A 1 HETATM 3 P P1 T7X . . . M 3 133.481 131.041 134.995 1 73.17 ? P1 T7X 805 A 1 HETATM 4 C C2 T7X . . . M 3 137.214 131.738 134.942 1 73.17 ? C2 T7X 805 A 1 HETATM 5 O O2 T7X . . . M 3 136.834 132.367 133.744 1 73.17 ? O2 T7X 805 A 1 HETATM 6 C C3 T7X . . . M 3 138.549 131.02 134.775 1 73.17 ? C3 T7X 805 A 1 HETATM 7 O O3 T7X . . . M 3 139.512 131.997 134.442 1 73.17 ? O3 T7X 805 A 1 HETATM 8 C C4 T7X . . . M 3 138.918 130.272 136.047 1 73.17 ? C4 T7X 805 A 1 HETATM 9 O O4 T7X . . . M 3 140.162 129.612 135.918 1 73.17 ? O4 T7X 805 A 1 HETATM 10 C C5 T7X . . . M 3 137.846 129.227 136.323 1 73.17 ? C5 T7X 805 A 1 HETATM 11 O O5 T7X . . . M 3 138.132 128.471 137.475 1 73.17 ? O5 T7X 805 A 1 HETATM 12 C C6 T7X . . . M 3 136.492 129.899 136.535 1 73.17 ? C6 T7X 805 A 1 HETATM 13 O O6 T7X . . . M 3 136.504 130.718 137.676 1 73.17 ? O6 T7X 805 A 1 HETATM 14 C C7 T7X . . . M 3 132.927 128.463 135.101 1 73.17 ? C7 T7X 805 A 1 HETATM 15 O O11 T7X . . . M 3 133.506 130.85 133.509 1 73.17 ? O11 T7X 805 A 1 HETATM 16 O O12 T7X . . . M 3 132.422 131.904 135.616 1 73.17 ? O12 T7X 805 A 1 HETATM 17 O O13 T7X . . . M 3 133.506 129.576 135.742 1 73.17 ? O13 T7X 805 A 1 HETATM 18 H H1 T7X . . . M 3 135.98 130.142 134.578 1 73.17 ? H1 T7X 805 A 1 HETATM 19 H H2 T7X . . . M 3 137.308 132.389 135.655 1 73.17 ? H2 T7X 805 A 1 HETATM 20 H H3 T7X . . . M 3 136.688 131.756 133.171 1 73.17 ? H3 T7X 805 A 1 HETATM 21 H H4 T7X . . . M 3 138.459 130.376 134.055 1 73.17 ? H4 T7X 805 A 1 HETATM 22 H H5 T7X . . . M 3 140.282 131.639 134.461 1 73.17 ? H5 T7X 805 A 1 HETATM 23 H H6 T7X . . . M 3 138.941 130.9 136.786 1 73.17 ? H6 T7X 805 A 1 HETATM 24 H H7 T7X . . . M 3 140.787 130.165 136.084 1 73.17 ? H7 T7X 805 A 1 HETATM 25 H H8 T7X . . . M 3 137.777 128.651 135.545 1 73.17 ? H8 T7X 805 A 1 HETATM 26 H H9 T7X . . . M 3 138.549 128.975 138.018 1 73.17 ? H9 T7X 805 A 1 HETATM 27 H H10 T7X . . . M 3 135.827 129.198 136.623 1 73.17 ? H10 T7X 805 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 27 #