data_7P1K # _model_server_result.job_id 6smFg9aMhdlytdIXLWRUdw _model_server_result.datetime_utc '2024-12-24 17:26:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7p1k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":806}' # _entry.id 7P1K # _exptl.entry_id 7P1K _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 887.128 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Phosphatidylinositol _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7P1K _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7P1K _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 M N N ? 3 N N N # _chem_comp.formula 'C47 H83 O13 P' _chem_comp.formula_weight 887.128 _chem_comp.id T7X _chem_comp.mon_nstd_flag . _chem_comp.name Phosphatidylinositol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 C2 T7X sing 288 n n O3 C3 T7X sing 289 n n C2 C3 T7X sing 290 n n C2 C1 T7X sing 291 n n O1 C1 T7X sing 292 n n O1 P1 T7X sing 293 n n O11 P1 T7X doub 294 n n O6 C6 T7X sing 295 n n C3 C4 T7X sing 296 n n C1 C6 T7X sing 297 n n C7 C8 T7X sing 298 n n C7 O13 T7X sing 299 n n P1 O13 T7X sing 300 n n P1 O12 T7X sing 301 n n O17 C10 T7X doub 302 n n C6 C5 T7X sing 303 n n C4 O4 T7X sing 304 n n C4 C5 T7X sing 305 n n C8 O16 T7X sing 306 n n C8 C9 T7X sing 307 n n O16 C10 T7X sing 308 n n C10 C12 T7X sing 309 n n C5 O5 T7X sing 310 n n C9 O18 T7X sing 311 n n C14 C13 T7X sing 312 n n C14 C15 T7X sing 313 n n C13 C12 T7X sing 314 n n O18 C11 T7X sing 315 n n C17 C16 T7X sing 316 n n C17 C18 T7X sing 317 n n C15 C16 T7X doub 318 z n C11 O19 T7X doub 319 n n C11 C31 T7X sing 320 n n C20 C21 T7X sing 321 n n C20 C19 T7X sing 322 n n C22 C21 T7X doub 323 e n C22 C23 T7X sing 324 n n C31 C32 T7X sing 325 n n C23 C24 T7X sing 326 n n C24 C25 T7X doub 327 e n C18 C19 T7X doub 328 z n C25 C26 T7X sing 329 n n C32 C33 T7X sing 330 n n C33 C34 T7X sing 331 n n C26 C27 T7X sing 332 n n C35 C34 T7X sing 333 n n C35 C36 T7X sing 334 n n C37 C36 T7X sing 335 n n C37 C38 T7X sing 336 n n C41 C40 T7X sing 337 n n C39 C38 T7X sing 338 n n C39 C40 T7X sing 339 n n C1 H1 T7X sing 340 n n C2 H2 T7X sing 341 n n O2 H3 T7X sing 342 n n C3 H4 T7X sing 343 n n O3 H5 T7X sing 344 n n C4 H6 T7X sing 345 n n O4 H7 T7X sing 346 n n C5 H8 T7X sing 347 n n O5 H9 T7X sing 348 n n C6 H10 T7X sing 349 n n O6 H11 T7X sing 350 n n C7 H12 T7X sing 351 n n C7 H13 T7X sing 352 n n C8 H14 T7X sing 353 n n C9 H15 T7X sing 354 n n C9 H16 T7X sing 355 n n C12 H17 T7X sing 356 n n C12 H18 T7X sing 357 n n O12 H19 T7X sing 358 n n C13 H20 T7X sing 359 n n C13 H21 T7X sing 360 n n C14 H22 T7X sing 361 n n C14 H23 T7X sing 362 n n C15 H24 T7X sing 363 n n C16 H25 T7X sing 364 n n C17 H26 T7X sing 365 n n C17 H27 T7X sing 366 n n C18 H28 T7X sing 367 n n C19 H29 T7X sing 368 n n C20 H30 T7X sing 369 n n C21 H32 T7X sing 370 n n C22 H34 T7X sing 371 n n C23 H36 T7X sing 372 n n C24 H38 T7X sing 373 n n C25 H40 T7X sing 374 n n C26 H42 T7X sing 375 n n C26 H43 T7X sing 376 n n C27 H44 T7X sing 377 n n C27 H45 T7X sing 378 n n C31 H47 T7X sing 379 n n C31 H48 T7X sing 380 n n C32 H49 T7X sing 381 n n C32 H50 T7X sing 382 n n C33 H51 T7X sing 383 n n C33 H52 T7X sing 384 n n C34 H53 T7X sing 385 n n C34 H54 T7X sing 386 n n C35 H55 T7X sing 387 n n C35 H56 T7X sing 388 n n C36 H57 T7X sing 389 n n C36 H58 T7X sing 390 n n C37 H59 T7X sing 391 n n C37 H60 T7X sing 392 n n C38 H61 T7X sing 393 n n C38 H62 T7X sing 394 n n C39 H63 T7X sing 395 n n C39 H64 T7X sing 396 n n C40 H65 T7X sing 397 n n C40 H66 T7X sing 398 n n C41 H67 T7X sing 399 n n C41 H68 T7X sing 400 n n C27 C28 T7X sing 401 n n C28 C29 T7X sing 402 n n C29 C30 T7X sing 403 n n C41 C42 T7X sing 404 n n C42 C43 T7X sing 405 n n C43 C44 T7X sing 406 n n C44 C45 T7X sing 407 n n C45 C46 T7X sing 408 n n C20 H31 T7X sing 409 n n C23 H33 T7X sing 410 n n C28 H35 T7X sing 411 n n C28 H37 T7X sing 412 n n C29 H39 T7X sing 413 n n C29 H41 T7X sing 414 n n C30 H46 T7X sing 415 n n C30 H69 T7X sing 416 n n C30 H70 T7X sing 417 n n C42 H71 T7X sing 418 n n C42 H72 T7X sing 419 n n C43 H73 T7X sing 420 n n C43 H74 T7X sing 421 n n C44 H75 T7X sing 422 n n C44 H76 T7X sing 423 n n C45 H77 T7X sing 424 n n C45 H78 T7X sing 425 n n C46 H79 T7X sing 426 n n C46 H80 T7X sing 427 n n C46 C47 T7X sing 428 n n C47 H81 T7X sing 429 n n C47 H82 T7X sing 430 n n C47 H83 T7X sing 431 n n # _atom_sites.entry_id 7P1K _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 Y01 B 1 1201 1201 Y01 Y01 . D 3 T7X B 1 1202 1301 T7X T7X . E 3 T7X B 1 1203 1401 T7X 2Y5 . F 2 Y01 B 1 1204 801 Y01 Y01 . G 2 Y01 B 1 1205 901 Y01 Y01 . H 2 Y01 B 1 1206 1001 Y01 Y01 . I 2 Y01 A 1 801 801 Y01 Y01 . J 2 Y01 A 1 802 901 Y01 Y01 . K 2 Y01 A 1 803 1001 Y01 Y01 . L 2 Y01 A 1 804 1201 Y01 Y01 . M 3 T7X A 1 805 1301 T7X T7X . N 3 T7X A 1 806 1401 T7X 2Y5 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 T7X . . . N 3 120.996 128.572 137.953 1 26.9 ? C1 T7X 806 A 1 HETATM 2 O O1 T7X . . . N 3 121.753 129.746 138.024 1 26.9 ? O1 T7X 806 A 1 HETATM 3 P P1 T7X . . . N 3 123.397 129.67 137.957 1 26.9 ? P1 T7X 806 A 1 HETATM 4 C C2 T7X . . . N 3 119.79 128.756 138.871 1 26.9 ? C2 T7X 806 A 1 HETATM 5 O O2 T7X . . . N 3 120.238 128.797 140.193 1 26.9 ? O2 T7X 806 A 1 HETATM 6 C C3 T7X . . . N 3 118.808 127.606 138.704 1 26.9 ? C3 T7X 806 A 1 HETATM 7 O O3 T7X . . . N 3 117.734 127.757 139.587 1 26.9 ? O3 T7X 806 A 1 HETATM 8 C C4 T7X . . . N 3 118.308 127.641 137.268 1 26.9 ? C4 T7X 806 A 1 HETATM 9 O O4 T7X . . . N 3 117.266 126.725 137.09 1 26.9 ? O4 T7X 806 A 1 HETATM 10 C C5 T7X . . . N 3 119.481 127.29 136.36 1 26.9 ? C5 T7X 806 A 1 HETATM 11 O O5 T7X . . . N 3 119.037 127.251 135.032 1 26.9 ? O5 T7X 806 A 1 HETATM 12 C C6 T7X . . . N 3 120.579 128.346 136.496 1 26.9 ? C6 T7X 806 A 1 HETATM 13 O O6 T7X . . . N 3 120.102 129.552 135.977 1 26.9 ? O6 T7X 806 A 1 HETATM 14 C C7 T7X . . . N 3 123.273 131.822 136.458 1 26.9 ? C7 T7X 806 A 1 HETATM 15 C C8 T7X . . . N 3 123.379 132.106 134.961 1 26.9 ? C8 T7X 806 A 1 HETATM 16 C C9 T7X . . . N 3 123.715 133.576 134.727 1 26.9 ? C9 T7X 806 A 1 HETATM 17 C C10 T7X . . . N 3 123.976 130.217 133.678 1 26.9 ? C10 T7X 806 A 1 HETATM 18 C C11 T7X . . . N 3 125.544 135.012 134.406 1 26.9 ? C11 T7X 806 A 1 HETATM 19 O O11 T7X . . . N 3 123.863 128.297 137.794 1 26.9 ? O11 T7X 806 A 1 HETATM 20 C C12 T7X . . . N 3 124.591 128.848 133.959 1 26.9 ? C12 T7X 806 A 1 HETATM 21 O O12 T7X . . . N 3 123.995 130.019 139.242 1 26.9 ? O12 T7X 806 A 1 HETATM 22 C C13 T7X . . . N 3 126.106 128.932 133.787 1 26.9 ? C13 T7X 806 A 1 HETATM 23 O O13 T7X . . . N 3 123.963 130.642 136.754 1 26.9 ? O13 T7X 806 A 1 HETATM 24 C C14 T7X . . . N 3 126.8 128.215 134.944 1 26.9 ? C14 T7X 806 A 1 HETATM 25 C C15 T7X . . . N 3 126.808 129.118 136.176 1 26.9 ? C15 T7X 806 A 1 HETATM 26 C C16 T7X . . . N 3 127.039 128.363 137.483 1 26.9 ? C16 T7X 806 A 1 HETATM 27 O O16 T7X . . . N 3 124.404 131.331 134.408 1 26.9 ? O16 T7X 806 A 1 HETATM 28 C C17 T7X . . . N 3 128.517 128.235 137.845 1 26.9 ? C17 T7X 806 A 1 HETATM 29 O O17 T7X . . . N 3 123.142 130.334 132.845 1 26.9 ? O17 T7X 806 A 1 HETATM 30 C C18 T7X . . . N 3 129.119 127.031 137.126 1 26.9 ? C18 T7X 806 A 1 HETATM 31 O O18 T7X . . . N 3 125.104 133.736 134.768 1 26.9 ? O18 T7X 806 A 1 HETATM 32 C C19 T7X . . . N 3 130.135 126.28 137.983 1 26.9 ? C19 T7X 806 A 1 HETATM 33 O O19 T7X . . . N 3 125.597 135.875 135.215 1 26.9 ? O19 T7X 806 A 1 HETATM 34 C C20 T7X . . . N 3 129.732 124.833 138.258 1 26.9 ? C20 T7X 806 A 1 HETATM 35 C C21 T7X . . . N 3 128.262 124.778 138.674 1 26.9 ? C21 T7X 806 A 1 HETATM 36 C C22 T7X . . . N 3 127.37 124.022 137.691 1 26.9 ? C22 T7X 806 A 1 HETATM 37 C C23 T7X . . . N 3 125.959 124.603 137.607 1 26.9 ? C23 T7X 806 A 1 HETATM 38 C C24 T7X . . . N 3 125.583 124.849 136.148 1 26.9 ? C24 T7X 806 A 1 HETATM 39 C C25 T7X . . . N 3 124.337 125.719 135.994 1 26.9 ? C25 T7X 806 A 1 HETATM 40 C C26 T7X . . . N 3 123.134 124.955 135.45 1 26.9 ? C26 T7X 806 A 1 HETATM 41 C C27 T7X . . . N 3 122.922 125.327 133.984 1 26.9 ? C27 T7X 806 A 1 HETATM 42 C C31 T7X . . . N 3 125.961 135.288 132.963 1 26.9 ? C31 T7X 806 A 1 HETATM 43 C C32 T7X . . . N 3 127.1 134.348 132.574 1 26.9 ? C32 T7X 806 A 1 HETATM 44 H H1 T7X . . . N 3 121.507 127.843 138.249 1 26.9 ? H1 T7X 806 A 1 HETATM 45 H H2 T7X . . . N 3 119.361 129.564 138.659 1 26.9 ? H2 T7X 806 A 1 HETATM 46 H H3 T7X . . . N 3 121.059 128.662 140.212 1 26.9 ? H3 T7X 806 A 1 HETATM 47 H H4 T7X . . . N 3 119.246 126.791 138.865 1 26.9 ? H4 T7X 806 A 1 HETATM 48 H H5 T7X . . . N 3 117.432 128.53 139.526 1 26.9 ? H5 T7X 806 A 1 HETATM 49 H H6 T7X . . . N 3 118.004 128.506 137.067 1 26.9 ? H6 T7X 806 A 1 HETATM 50 H H8 T7X . . . N 3 119.825 126.452 136.605 1 26.9 ? H8 T7X 806 A 1 HETATM 51 H H9 T7X . . . N 3 118.89 128.025 134.765 1 26.9 ? H9 T7X 806 A 1 HETATM 52 H H10 T7X . . . N 3 121.33 128.072 136.005 1 26.9 ? H10 T7X 806 A 1 HETATM 53 H H11 T7X . . . N 3 119.482 129.825 136.457 1 26.9 ? H11 T7X 806 A 1 HETATM 54 H H12 T7X . . . N 3 122.37 131.722 136.694 1 26.9 ? H12 T7X 806 A 1 HETATM 55 H H13 T7X . . . N 3 123.647 132.534 136.942 1 26.9 ? H13 T7X 806 A 1 HETATM 56 H H14 T7X . . . N 3 122.563 131.901 134.545 1 26.9 ? H14 T7X 806 A 1 HETATM 57 H H15 T7X . . . N 3 123.313 134.113 135.385 1 26.9 ? H15 T7X 806 A 1 HETATM 58 H H16 T7X . . . N 3 123.398 133.835 133.882 1 26.9 ? H16 T7X 806 A 1 HETATM 59 H H17 T7X . . . N 3 124.242 128.22 133.354 1 26.9 ? H17 T7X 806 A 1 HETATM 60 H H18 T7X . . . N 3 124.385 128.586 134.837 1 26.9 ? H18 T7X 806 A 1 HETATM 61 H H20 T7X . . . N 3 126.369 129.834 133.777 1 26.9 ? H20 T7X 806 A 1 HETATM 62 H H21 T7X . . . N 3 126.351 128.527 132.976 1 26.9 ? H21 T7X 806 A 1 HETATM 63 H H22 T7X . . . N 3 127.684 128.012 134.7 1 26.9 ? H22 T7X 806 A 1 HETATM 64 H H23 T7X . . . N 3 126.339 127.422 135.139 1 26.9 ? H23 T7X 806 A 1 HETATM 65 H H24 T7X . . . N 3 125.989 129.595 136.225 1 26.9 ? H24 T7X 806 A 1 HETATM 66 H H25 T7X . . . N 3 126.651 127.497 137.423 1 26.9 ? H25 T7X 806 A 1 HETATM 67 H H26 T7X . . . N 3 128.603 128.12 138.773 1 26.9 ? H26 T7X 806 A 1 HETATM 68 H H27 T7X . . . N 3 128.971 129.014 137.583 1 26.9 ? H27 T7X 806 A 1 HETATM 69 H H28 T7X . . . N 3 129.536 127.319 136.321 1 26.9 ? H28 T7X 806 A 1 HETATM 70 H H29 T7X . . . N 3 130.984 126.297 137.556 1 26.9 ? H29 T7X 806 A 1 HETATM 71 H H30 T7X . . . N 3 130.264 124.489 138.952 1 26.9 ? H30 T7X 806 A 1 HETATM 72 H H32 T7X . . . N 3 128.19 124.385 139.536 1 26.9 ? H32 T7X 806 A 1 HETATM 73 H H34 T7X . . . N 3 127.768 124.027 136.827 1 26.9 ? H34 T7X 806 A 1 HETATM 74 H H36 T7X . . . N 3 125.351 123.997 137.988 1 26.9 ? H36 T7X 806 A 1 HETATM 75 H H38 T7X . . . N 3 126.312 125.255 135.693 1 26.9 ? H38 T7X 806 A 1 HETATM 76 H H40 T7X . . . N 3 124.113 126.097 136.837 1 26.9 ? H40 T7X 806 A 1 HETATM 77 H H42 T7X . . . N 3 122.369 125.18 135.947 1 26.9 ? H42 T7X 806 A 1 HETATM 78 H H43 T7X . . . N 3 123.291 124.032 135.52 1 26.9 ? H43 T7X 806 A 1 HETATM 79 H H44 T7X . . . N 3 122.601 124.579 133.516 1 26.9 ? H44 T7X 806 A 1 HETATM 80 H H45 T7X . . . N 3 123.74 125.6 133.612 1 26.9 ? H45 T7X 806 A 1 HETATM 81 H H47 T7X . . . N 3 126.249 136.178 132.883 1 26.9 ? H47 T7X 806 A 1 HETATM 82 H H48 T7X . . . N 3 125.229 135.144 132.393 1 26.9 ? H48 T7X 806 A 1 HETATM 83 H H49 T7X . . . N 3 127.305 134.464 131.665 1 26.9 ? H49 T7X 806 A 1 HETATM 84 H H50 T7X . . . N 3 126.837 133.459 132.724 1 26.9 ? H50 T7X 806 A 1 HETATM 85 C C28 T7X . . . N 3 121.912 126.467 133.872 1 26.9 ? C28 T7X 806 A 1 HETATM 86 C C29 T7X . . . N 3 121.482 126.619 132.415 1 26.9 ? C29 T7X 806 A 1 HETATM 87 C C30 T7X . . . N 3 120.575 127.839 132.268 1 26.9 ? C30 T7X 806 A 1 HETATM 88 H H31 T7X . . . N 3 129.862 124.319 137.483 1 26.9 ? H31 T7X 806 A 1 HETATM 89 H H33 T7X . . . N 3 125.927 125.414 138.08 1 26.9 ? H33 T7X 806 A 1 HETATM 90 H H35 T7X . . . N 3 122.308 127.265 134.166 1 26.9 ? H35 T7X 806 A 1 HETATM 91 H H37 T7X . . . N 3 121.162 126.274 134.401 1 26.9 ? H37 T7X 806 A 1 HETATM 92 H H39 T7X . . . N 3 121.015 125.85 132.146 1 26.9 ? H39 T7X 806 A 1 HETATM 93 H H41 T7X . . . N 3 122.242 126.727 131.874 1 26.9 ? H41 T7X 806 A 1 HETATM 94 H H46 T7X . . . N 3 120.835 128.5 132.882 1 26.9 ? H46 T7X 806 A 1 HETATM 95 H H69 T7X . . . N 3 119.685 127.59 132.435 1 26.9 ? H69 T7X 806 A 1 HETATM 96 H H70 T7X . . . N 3 120.646 128.178 131.395 1 26.9 ? H70 T7X 806 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 33 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 96 #