data_7P2C
#
_model_server_result.job_id            vVM7iRbA83uRz9Ua2LZxjQ 
_model_server_result.datetime_utc      '2024-11-24 16:34:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7p2c 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"U","auth_seq_id":411}' 
#
_entry.id    7P2C 
#
_exptl.entry_id    7P2C 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          13 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7P2C 
_cell.length_a            102.5 
_cell.length_b            102.5 
_cell.length_c            237.4 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7P2C 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        94 
_symmetry.space_group_name_Hall    'P 4n 2n' 
_symmetry.space_group_name_H-M     'P 42 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      13 
_struct_asym.id                             U 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B NE2 HIS 190 L HIS 190 1_555 Q FE FE . M FE 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? 
metalc ? metalc2 B NE2 HIS 230 L HIS 230 1_555 Q FE FE . M FE 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? 
metalc ? metalc3 C NE2 HIS 219 M HIS 219 1_555 Q FE FE . M FE 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? 
metalc ? metalc4 C OE1 GLU 234 M GLU 234 1_555 Q FE FE . M FE 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? 
metalc ? metalc5 C OE2 GLU 234 M GLU 234 1_555 Q FE FE . M FE 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? 
metalc ? metalc6 C NE2 HIS 266 M HIS 266 1_555 Q FE FE . M FE 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 377 n n 
C1 C2 EDO sing 378 n n 
C1 H11 EDO sing 379 n n 
C1 H12 EDO sing 380 n n 
O1 HO1 EDO sing 381 n n 
C2 O2 EDO sing 382 n n 
C2 H21 EDO sing 383 n n 
C2 H22 EDO sing 384 n n 
O2 HO2 EDO sing 385 n n 
#
_atom_sites.entry_id                     7P2C 
_atom_sites.fract_transf_matrix[1][1]    0.009756 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009756 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004212 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 LDA H 1 301 702 LDA LDA . 
E 5 OLC L 1 301 301 OLC OLC . 
F 6 MYS L 1 302 401 MYS MYS . 
G 6 MYS L 1 303 501 MYS MYS . 
H 7 BCL L 1 304 302 BCL BCL . 
I 7 BCL L 1 305 304 BCL BCL . 
J 8 BPH L 1 306 402 BPH BPH . 
K 9 NKP M 1 401 301 NKP NKP . 
L 10 U10 M 1 402 501 U10 U10 . 
M 9 NKP M 1 403 601 NKP NKP . 
N 7 BCL M 1 404 301 BCL BCL . 
O 7 BCL M 1 405 303 BCL BCL . 
P 8 BPH M 1 406 401 BPH BPH . 
Q 11 FE M 1 407 500 FE FE . 
R 12 SPN M 1 408 600 SPN SPN . 
S 4 LDA M 1 409 701 LDA LDA . 
T 6 MYS M 1 410 901 MYS MYS . 
U 13 EDO M 1 411 54 EDO EDO . 
V 14 PO4 M 1 412 1 PO4 PO4 . 
W 15 HOH H 1 401 77 HOH HOH . 
W 15 HOH H 2 402 133 HOH HOH . 
W 15 HOH H 3 403 140 HOH HOH . 
W 15 HOH H 4 404 122 HOH HOH . 
W 15 HOH H 5 405 21 HOH HOH . 
W 15 HOH H 6 406 160 HOH HOH . 
W 15 HOH H 7 407 97 HOH HOH . 
W 15 HOH H 8 408 86 HOH HOH . 
W 15 HOH H 9 409 12 HOH HOH . 
W 15 HOH H 10 410 168 HOH HOH . 
W 15 HOH H 11 411 48 HOH HOH . 
W 15 HOH H 12 412 8 HOH HOH . 
W 15 HOH H 13 413 94 HOH HOH . 
W 15 HOH H 14 414 91 HOH HOH . 
W 15 HOH H 15 415 143 HOH HOH . 
W 15 HOH H 16 416 129 HOH HOH . 
W 15 HOH H 17 417 50 HOH HOH . 
W 15 HOH H 18 418 147 HOH HOH . 
W 15 HOH H 19 419 152 HOH HOH . 
W 15 HOH H 20 420 118 HOH HOH . 
W 15 HOH H 21 421 120 HOH HOH . 
W 15 HOH H 22 422 56 HOH HOH . 
W 15 HOH H 23 423 57 HOH HOH . 
W 15 HOH H 24 424 88 HOH HOH . 
W 15 HOH H 25 425 44 HOH HOH . 
W 15 HOH H 26 426 153 HOH HOH . 
W 15 HOH H 27 427 167 HOH HOH . 
W 15 HOH H 28 428 134 HOH HOH . 
W 15 HOH H 29 429 71 HOH HOH . 
W 15 HOH H 30 430 26 HOH HOH . 
W 15 HOH H 31 431 68 HOH HOH . 
W 15 HOH H 32 432 99 HOH HOH . 
W 15 HOH H 33 433 32 HOH HOH . 
W 15 HOH H 34 434 53 HOH HOH . 
W 15 HOH H 35 435 76 HOH HOH . 
W 15 HOH H 36 436 18 HOH HOH . 
W 15 HOH H 37 437 98 HOH HOH . 
W 15 HOH H 38 438 127 HOH HOH . 
W 15 HOH H 39 439 100 HOH HOH . 
W 15 HOH H 40 440 131 HOH HOH . 
W 15 HOH H 41 441 28 HOH HOH . 
W 15 HOH H 42 442 102 HOH HOH . 
W 15 HOH H 43 443 65 HOH HOH . 
W 15 HOH H 44 444 149 HOH HOH . 
W 15 HOH H 45 445 142 HOH HOH . 
W 15 HOH H 46 446 85 HOH HOH . 
W 15 HOH H 47 447 33 HOH HOH . 
W 15 HOH H 48 448 43 HOH HOH . 
W 15 HOH H 49 449 35 HOH HOH . 
W 15 HOH H 50 450 165 HOH HOH . 
W 15 HOH H 51 451 79 HOH HOH . 
W 15 HOH H 52 452 128 HOH HOH . 
W 15 HOH H 53 453 66 HOH HOH . 
W 15 HOH H 54 454 38 HOH HOH . 
W 15 HOH H 55 455 42 HOH HOH . 
W 15 HOH H 56 456 7 HOH HOH . 
W 15 HOH H 57 457 30 HOH HOH . 
W 15 HOH H 58 458 121 HOH HOH . 
W 15 HOH H 59 459 117 HOH HOH . 
W 15 HOH H 60 460 116 HOH HOH . 
W 15 HOH H 61 461 47 HOH HOH . 
W 15 HOH H 62 462 170 HOH HOH . 
W 15 HOH H 63 463 139 HOH HOH . 
W 15 HOH H 64 464 70 HOH HOH . 
W 15 HOH H 65 465 92 HOH HOH . 
W 15 HOH H 66 466 2 HOH HOH . 
W 15 HOH H 67 467 110 HOH HOH . 
W 15 HOH H 68 468 172 HOH HOH . 
W 15 HOH H 69 469 49 HOH HOH . 
W 15 HOH H 70 470 16 HOH HOH . 
W 15 HOH H 71 471 159 HOH HOH . 
W 15 HOH H 72 472 166 HOH HOH . 
W 15 HOH H 73 473 113 HOH HOH . 
W 15 HOH H 74 474 23 HOH HOH . 
W 15 HOH H 75 475 135 HOH HOH . 
W 15 HOH H 76 476 111 HOH HOH . 
W 15 HOH H 77 477 174 HOH HOH . 
W 15 HOH H 78 478 173 HOH HOH . 
X 15 HOH L 1 401 96 HOH HOH . 
X 15 HOH L 2 402 59 HOH HOH . 
X 15 HOH L 3 403 137 HOH HOH . 
X 15 HOH L 4 404 89 HOH HOH . 
X 15 HOH L 5 405 104 HOH HOH . 
X 15 HOH L 6 406 10 HOH HOH . 
X 15 HOH L 7 407 90 HOH HOH . 
X 15 HOH L 8 408 36 HOH HOH . 
X 15 HOH L 9 409 63 HOH HOH . 
X 15 HOH L 10 410 62 HOH HOH . 
X 15 HOH L 11 411 150 HOH HOH . 
X 15 HOH L 12 412 136 HOH HOH . 
X 15 HOH L 13 413 93 HOH HOH . 
X 15 HOH L 14 414 87 HOH HOH . 
X 15 HOH L 15 415 148 HOH HOH . 
X 15 HOH L 16 416 81 HOH HOH . 
X 15 HOH L 17 417 31 HOH HOH . 
X 15 HOH L 18 418 22 HOH HOH . 
X 15 HOH L 19 419 11 HOH HOH . 
X 15 HOH L 20 420 67 HOH HOH . 
X 15 HOH L 21 421 13 HOH HOH . 
X 15 HOH L 22 422 1 HOH HOH . 
X 15 HOH L 23 423 84 HOH HOH . 
X 15 HOH L 24 424 141 HOH HOH . 
X 15 HOH L 25 425 61 HOH HOH . 
X 15 HOH L 26 426 171 HOH HOH . 
X 15 HOH L 27 427 78 HOH HOH . 
X 15 HOH L 28 428 5 HOH HOH . 
X 15 HOH L 29 429 17 HOH HOH . 
X 15 HOH L 30 430 124 HOH HOH . 
X 15 HOH L 31 431 3 HOH HOH . 
X 15 HOH L 32 432 154 HOH HOH . 
X 15 HOH L 33 433 114 HOH HOH . 
X 15 HOH L 34 434 19 HOH HOH . 
X 15 HOH L 35 435 130 HOH HOH . 
X 15 HOH L 36 436 20 HOH HOH . 
X 15 HOH L 37 437 24 HOH HOH . 
X 15 HOH L 38 438 27 HOH HOH . 
X 15 HOH L 39 439 74 HOH HOH . 
X 15 HOH L 40 440 46 HOH HOH . 
X 15 HOH L 41 441 138 HOH HOH . 
X 15 HOH L 42 442 25 HOH HOH . 
X 15 HOH L 43 443 123 HOH HOH . 
X 15 HOH L 44 444 103 HOH HOH . 
X 15 HOH L 45 445 151 HOH HOH . 
X 15 HOH L 46 446 72 HOH HOH . 
X 15 HOH L 47 447 95 HOH HOH . 
X 15 HOH L 48 448 125 HOH HOH . 
X 15 HOH L 49 449 101 HOH HOH . 
X 15 HOH L 50 450 54 HOH HOH . 
X 15 HOH L 51 451 162 HOH HOH . 
X 15 HOH L 52 452 156 HOH HOH . 
X 15 HOH L 53 453 161 HOH HOH . 
Y 15 HOH M 1 501 6 HOH HOH . 
Y 15 HOH M 2 502 82 HOH HOH . 
Y 15 HOH M 3 503 164 HOH HOH . 
Y 15 HOH M 4 504 40 HOH HOH . 
Y 15 HOH M 5 505 155 HOH HOH . 
Y 15 HOH M 6 506 37 HOH HOH . 
Y 15 HOH M 7 507 163 HOH HOH . 
Y 15 HOH M 8 508 146 HOH HOH . 
Y 15 HOH M 9 509 80 HOH HOH . 
Y 15 HOH M 10 510 15 HOH HOH . 
Y 15 HOH M 11 511 119 HOH HOH . 
Y 15 HOH M 12 512 169 HOH HOH . 
Y 15 HOH M 13 513 69 HOH HOH . 
Y 15 HOH M 14 514 41 HOH HOH . 
Y 15 HOH M 15 515 112 HOH HOH . 
Y 15 HOH M 16 516 126 HOH HOH . 
Y 15 HOH M 17 517 39 HOH HOH . 
Y 15 HOH M 18 518 55 HOH HOH . 
Y 15 HOH M 19 519 75 HOH HOH . 
Y 15 HOH M 20 520 157 HOH HOH . 
Y 15 HOH M 21 521 145 HOH HOH . 
Y 15 HOH M 22 522 64 HOH HOH . 
Y 15 HOH M 23 523 108 HOH HOH . 
Y 15 HOH M 24 524 45 HOH HOH . 
Y 15 HOH M 25 525 34 HOH HOH . 
Y 15 HOH M 26 526 9 HOH HOH . 
Y 15 HOH M 27 527 109 HOH HOH . 
Y 15 HOH M 28 528 115 HOH HOH . 
Y 15 HOH M 29 529 51 HOH HOH . 
Y 15 HOH M 30 530 58 HOH HOH . 
Y 15 HOH M 31 531 158 HOH HOH . 
Y 15 HOH M 32 532 52 HOH HOH . 
Y 15 HOH M 33 533 83 HOH HOH . 
Y 15 HOH M 34 534 107 HOH HOH . 
Y 15 HOH M 35 535 144 HOH HOH . 
Y 15 HOH M 36 536 14 HOH HOH . 
Y 15 HOH M 37 537 73 HOH HOH . 
Y 15 HOH M 38 538 132 HOH HOH . 
Y 15 HOH M 39 539 4 HOH HOH . 
Y 15 HOH M 40 540 106 HOH HOH . 
Y 15 HOH M 41 541 29 HOH HOH . 
Y 15 HOH M 42 542 105 HOH HOH . 
Y 15 HOH M 43 543 60 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . U 13 -9.274 -36.245 -56.085 1 53.74 ? C1 EDO 411 M 1 
HETATM 2 O O1 EDO . . . U 13 -9.053 -36.149 -54.675 1 46.7 ? O1 EDO 411 M 1 
HETATM 3 C C2 EDO . . . U 13 -9.218 -37.738 -56.313 1 54.68 ? C2 EDO 411 M 1 
HETATM 4 O O2 EDO . . . U 13 -9.29 -38.272 -54.989 1 42.71 ? O2 EDO 411 M 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           315 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           4 
#