data_7P2H
#
_model_server_result.job_id            bp_pn-tAH7gSH629yK9img 
_model_server_result.datetime_utc      '2024-11-23 08:41:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7p2h 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":102}' 
#
_entry.id    7P2H 
#
_exptl.entry_id    7P2H 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7P2H 
_cell.length_a            51.023 
_cell.length_b            51.023 
_cell.length_c            275.902 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7P2H 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,K 1 1,2,3 
B,G,H,I,J,L 2 1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 
3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 H N N 
? 3 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C GLY 31 A GLY 24 1_555 A N MLY 32 A MLY 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale2 A C MLY 32 A MLY 25 1_555 A N ILE 33 A ILE 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale3 A C GLY 40 A GLY 33 1_555 A N MLY 41 A MLY 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale4 A C MLY 41 A MLY 34 1_555 A N GLY 42 A GLY 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale5 A C THR 89 A THR 82 1_555 A N MLY 90 A MLY 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale6 A C MLY 90 A MLY 83 1_555 A N GLY 91 A GLY 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale7 B C GLY 31 B GLY 24 1_555 B N MLY 32 B MLY 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale8 B C MLY 32 B MLY 25 1_555 B N ILE 33 B ILE 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale9 B C GLY 40 B GLY 33 1_555 B N MLY 41 B MLY 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale10 B C MLY 41 B MLY 34 1_555 B N GLY 42 B GLY 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale11 B C THR 89 B THR 82 1_555 B N MLY 90 B MLY 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale12 B C MLY 90 B MLY 83 1_555 B N GLY 91 B GLY 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
metalc ? metalc1 C O07 QQ7 . A QQ7 101 1_555 F NA NA . A NA 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.544 ? 
metalc ? metalc2 C O10 QQ7 . A QQ7 101 1_555 F NA NA . A NA 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? 
metalc ? metalc3 C O07 QQ7 . A QQ7 101 1_555 F NA NA . A NA 104 2_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? 
metalc ? metalc4 C O10 QQ7 . A QQ7 101 1_555 F NA NA . A NA 104 2_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? 
metalc ? metalc5 G O06 QQ7 . B QQ7 101 1_555 J NA NA . B NA 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.601 ? 
metalc ? metalc6 G O QQ7 . B QQ7 101 1_555 J NA NA . B NA 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.503 ? 
metalc ? metalc7 G O06 QQ7 . B QQ7 101 1_555 J NA NA . B NA 104 2_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.601 ? 
metalc ? metalc8 G O QQ7 . B QQ7 101 1_555 J NA NA . B NA 104 2_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     7P2H 
_atom_sites.fract_transf_matrix[1][1]    0.019599 
_atom_sites.fract_transf_matrix[1][2]    0.011315 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.022631 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003624 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 QQ7 A 1 101 115 QQ7 QQ7 . 
D 3 GOL A 1 102 201 GOL GOL . 
E 3 GOL A 1 103 301 GOL GOL . 
F 4 NA A 1 104 2 NA NA . 
G 2 QQ7 B 1 101 115 QQ7 QQ7 . 
H 3 GOL B 1 102 201 GOL GOL . 
I 3 GOL B 1 103 301 GOL GOL . 
J 4 NA B 1 104 3 NA NA . 
K 5 HOH A 1 201 87 HOH HOH . 
K 5 HOH A 2 202 27 HOH HOH . 
K 5 HOH A 3 203 5 HOH HOH . 
K 5 HOH A 4 204 3 HOH HOH . 
K 5 HOH A 5 205 45 HOH HOH . 
K 5 HOH A 6 206 4 HOH HOH . 
K 5 HOH A 7 207 90 HOH HOH . 
K 5 HOH A 8 208 18 HOH HOH . 
K 5 HOH A 9 209 61 HOH HOH . 
K 5 HOH A 10 210 46 HOH HOH . 
K 5 HOH A 11 211 17 HOH HOH . 
K 5 HOH A 12 212 121 HOH HOH . 
K 5 HOH A 13 213 62 HOH HOH . 
K 5 HOH A 14 214 32 HOH HOH . 
K 5 HOH A 15 215 57 HOH HOH . 
K 5 HOH A 16 216 60 HOH HOH . 
K 5 HOH A 17 217 22 HOH HOH . 
K 5 HOH A 18 218 35 HOH HOH . 
K 5 HOH A 19 219 109 HOH HOH . 
K 5 HOH A 20 220 9 HOH HOH . 
K 5 HOH A 21 221 10 HOH HOH . 
K 5 HOH A 22 222 96 HOH HOH . 
K 5 HOH A 23 223 89 HOH HOH . 
K 5 HOH A 24 224 105 HOH HOH . 
K 5 HOH A 25 225 114 HOH HOH . 
K 5 HOH A 26 226 37 HOH HOH . 
K 5 HOH A 27 227 8 HOH HOH . 
K 5 HOH A 28 228 64 HOH HOH . 
K 5 HOH A 29 229 44 HOH HOH . 
K 5 HOH A 30 230 112 HOH HOH . 
K 5 HOH A 31 231 100 HOH HOH . 
K 5 HOH A 32 232 12 HOH HOH . 
K 5 HOH A 33 233 33 HOH HOH . 
K 5 HOH A 34 234 29 HOH HOH . 
K 5 HOH A 35 235 83 HOH HOH . 
K 5 HOH A 36 236 66 HOH HOH . 
K 5 HOH A 37 237 119 HOH HOH . 
K 5 HOH A 38 238 48 HOH HOH . 
K 5 HOH A 39 239 79 HOH HOH . 
K 5 HOH A 40 240 67 HOH HOH . 
K 5 HOH A 41 241 34 HOH HOH . 
K 5 HOH A 42 242 76 HOH HOH . 
K 5 HOH A 43 243 15 HOH HOH . 
K 5 HOH A 44 244 71 HOH HOH . 
K 5 HOH A 45 245 23 HOH HOH . 
K 5 HOH A 46 246 78 HOH HOH . 
K 5 HOH A 47 247 101 HOH HOH . 
K 5 HOH A 48 248 30 HOH HOH . 
K 5 HOH A 49 249 98 HOH HOH . 
K 5 HOH A 50 250 118 HOH HOH . 
L 5 HOH B 1 201 108 HOH HOH . 
L 5 HOH B 2 202 120 HOH HOH . 
L 5 HOH B 3 203 2 HOH HOH . 
L 5 HOH B 4 204 1 HOH HOH . 
L 5 HOH B 5 205 107 HOH HOH . 
L 5 HOH B 6 206 26 HOH HOH . 
L 5 HOH B 7 207 6 HOH HOH . 
L 5 HOH B 8 208 7 HOH HOH . 
L 5 HOH B 9 209 54 HOH HOH . 
L 5 HOH B 10 210 81 HOH HOH . 
L 5 HOH B 11 211 82 HOH HOH . 
L 5 HOH B 12 212 39 HOH HOH . 
L 5 HOH B 13 213 11 HOH HOH . 
L 5 HOH B 14 214 16 HOH HOH . 
L 5 HOH B 15 215 53 HOH HOH . 
L 5 HOH B 16 216 75 HOH HOH . 
L 5 HOH B 17 217 28 HOH HOH . 
L 5 HOH B 18 218 110 HOH HOH . 
L 5 HOH B 19 219 68 HOH HOH . 
L 5 HOH B 20 220 65 HOH HOH . 
L 5 HOH B 21 221 59 HOH HOH . 
L 5 HOH B 22 222 49 HOH HOH . 
L 5 HOH B 23 223 94 HOH HOH . 
L 5 HOH B 24 224 52 HOH HOH . 
L 5 HOH B 25 225 72 HOH HOH . 
L 5 HOH B 26 226 24 HOH HOH . 
L 5 HOH B 27 227 19 HOH HOH . 
L 5 HOH B 28 228 40 HOH HOH . 
L 5 HOH B 29 229 93 HOH HOH . 
L 5 HOH B 30 230 95 HOH HOH . 
L 5 HOH B 31 231 31 HOH HOH . 
L 5 HOH B 32 232 51 HOH HOH . 
L 5 HOH B 33 233 56 HOH HOH . 
L 5 HOH B 34 234 55 HOH HOH . 
L 5 HOH B 35 235 58 HOH HOH . 
L 5 HOH B 36 236 74 HOH HOH . 
L 5 HOH B 37 237 14 HOH HOH . 
L 5 HOH B 38 238 50 HOH HOH . 
L 5 HOH B 39 239 103 HOH HOH . 
L 5 HOH B 40 240 77 HOH HOH . 
L 5 HOH B 41 241 13 HOH HOH . 
L 5 HOH B 42 242 86 HOH HOH . 
L 5 HOH B 43 243 102 HOH HOH . 
L 5 HOH B 44 244 117 HOH HOH . 
L 5 HOH B 45 245 88 HOH HOH . 
L 5 HOH B 46 246 99 HOH HOH . 
L 5 HOH B 47 247 25 HOH HOH . 
L 5 HOH B 48 248 85 HOH HOH . 
L 5 HOH B 49 249 43 HOH HOH . 
L 5 HOH B 50 250 36 HOH HOH . 
L 5 HOH B 51 251 38 HOH HOH . 
L 5 HOH B 52 252 70 HOH HOH . 
L 5 HOH B 53 253 41 HOH HOH . 
L 5 HOH B 54 254 84 HOH HOH . 
L 5 HOH B 55 255 80 HOH HOH . 
L 5 HOH B 56 256 91 HOH HOH . 
L 5 HOH B 57 257 20 HOH HOH . 
L 5 HOH B 58 258 73 HOH HOH . 
L 5 HOH B 59 259 92 HOH HOH . 
L 5 HOH B 60 260 63 HOH HOH . 
L 5 HOH B 61 261 104 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 3 18.101 -2.483 -22.903 1 45.69 ? C1 GOL 102 A 1 
HETATM 2 O O1 GOL . . . D 3 18.896 -3.16 -21.939 1 48.51 ? O1 GOL 102 A 1 
HETATM 3 C C2 GOL . . . D 3 17.115 -1.528 -22.136 1 47.15 ? C2 GOL 102 A 1 
HETATM 4 O O2 GOL . . . D 3 17.704 -0.63 -21.298 1 42.23 ? O2 GOL 102 A 1 
HETATM 5 C C3 GOL . . . D 3 16.162 -0.877 -23.188 1 38.06 ? C3 GOL 102 A 1 
HETATM 6 O O3 GOL . . . D 3 15.02 -1.634 -23.044 1 36.59 ? O3 GOL 102 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           321 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#