data_7P31 # _model_server_result.job_id BFEAqFb8Hb7S6PVtzoZmxQ _model_server_result.datetime_utc '2024-11-28 01:16:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7p31 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1007}' # _entry.id 7P31 # _exptl.entry_id 7P31 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7P31 _cell.length_a 79.979 _cell.length_b 102.575 _cell.length_c 103.829 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7P31 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,S 1 1 B,L,M,N,O,P,Q,R,T 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 I N N ? 6 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PRO 364 A PRO 390 1_555 A N CSX 365 A CSX 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale2 A C CSX 365 A CSX 391 1_555 A N LYS 366 A LYS 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 B C PRO 364 B PRO 390 1_555 B N CSX 365 B CSX 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 B C CSX 365 B CSX 391 1_555 B N LYS 366 B LYS 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 362 n n P O2 PO4 sing 363 n n P O3 PO4 sing 364 n n P O4 PO4 sing 365 n n # _atom_sites.entry_id 7P31 _atom_sites.fract_transf_matrix[1][1] 0.012503 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009749 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009631 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PG4 A 1 1001 1001 PG4 PG4 . D 3 AN2 A 1 1002 1301 AN2 AN2 . E 4 GOL A 1 1003 1501 GOL GOL . F 5 PYZ A 1 504 1701 PYZ LIG . G 4 GOL A 1 1005 1801 GOL GOL . H 4 GOL A 1 1006 1901 GOL GOL . I 6 PO4 A 1 1007 1 PO4 PO4 . J 7 CL A 1 1008 1 CL CL . K 7 CL A 1 1009 2 CL CL . L 4 GOL B 1 501 503 GOL GOL . M 3 AN2 B 1 502 1101 AN2 AN2 . N 4 GOL B 1 503 1401 GOL GOL . O 5 PYZ B 1 504 1701 PYZ LIG . P 4 GOL B 1 505 2001 GOL GOL . Q 6 PO4 B 1 506 2 PO4 PO4 . R 8 IOD B 1 507 1 IOD IOD . S 9 HOH A 1 1101 76 HOH HOH . S 9 HOH A 2 1102 363 HOH HOH . S 9 HOH A 3 1103 687 HOH HOH . S 9 HOH A 4 1104 634 HOH HOH . S 9 HOH A 5 1105 608 HOH HOH . S 9 HOH A 6 1106 624 HOH HOH . S 9 HOH A 7 1107 362 HOH HOH . S 9 HOH A 8 1108 351 HOH HOH . S 9 HOH A 9 1109 679 HOH HOH . S 9 HOH A 10 1110 350 HOH HOH . S 9 HOH A 11 1111 611 HOH HOH . S 9 HOH A 12 1112 394 HOH HOH . S 9 HOH A 13 1113 114 HOH HOH . S 9 HOH A 14 1114 642 HOH HOH . S 9 HOH A 15 1115 361 HOH HOH . S 9 HOH A 16 1116 699 HOH HOH . S 9 HOH A 17 1117 728 HOH HOH . S 9 HOH A 18 1118 707 HOH HOH . S 9 HOH A 19 1119 695 HOH HOH . S 9 HOH A 20 1120 680 HOH HOH . S 9 HOH A 21 1121 653 HOH HOH . S 9 HOH A 22 1122 133 HOH HOH . S 9 HOH A 23 1123 21 HOH HOH . S 9 HOH A 24 1124 701 HOH HOH . S 9 HOH A 25 1125 658 HOH HOH . S 9 HOH A 26 1126 712 HOH HOH . S 9 HOH A 27 1127 708 HOH HOH . S 9 HOH A 28 1128 13 HOH HOH . S 9 HOH A 29 1129 715 HOH HOH . S 9 HOH A 30 1130 636 HOH HOH . S 9 HOH A 31 1131 675 HOH HOH . S 9 HOH A 32 1132 692 HOH HOH . S 9 HOH A 33 1133 286 HOH HOH . S 9 HOH A 34 1134 306 HOH HOH . S 9 HOH A 35 1135 776 HOH HOH . S 9 HOH A 36 1136 689 HOH HOH . S 9 HOH A 37 1137 656 HOH HOH . S 9 HOH A 38 1138 720 HOH HOH . S 9 HOH A 39 1139 172 HOH HOH . S 9 HOH A 40 1140 388 HOH HOH . S 9 HOH A 41 1141 255 HOH HOH . S 9 HOH A 42 1142 625 HOH HOH . S 9 HOH A 43 1143 292 HOH HOH . S 9 HOH A 44 1144 668 HOH HOH . S 9 HOH A 45 1145 659 HOH HOH . S 9 HOH A 46 1146 734 HOH HOH . S 9 HOH A 47 1147 93 HOH HOH . S 9 HOH A 48 1148 686 HOH HOH . S 9 HOH A 49 1149 314 HOH HOH . S 9 HOH A 50 1150 768 HOH HOH . S 9 HOH A 51 1151 344 HOH HOH . S 9 HOH A 52 1152 301 HOH HOH . S 9 HOH A 53 1153 243 HOH HOH . S 9 HOH A 54 1154 726 HOH HOH . S 9 HOH A 55 1155 334 HOH HOH . S 9 HOH A 56 1156 398 HOH HOH . S 9 HOH A 57 1157 390 HOH HOH . S 9 HOH A 58 1158 222 HOH HOH . S 9 HOH A 59 1159 752 HOH HOH . S 9 HOH A 60 1160 759 HOH HOH . S 9 HOH A 61 1161 741 HOH HOH . S 9 HOH A 62 1162 387 HOH HOH . S 9 HOH A 63 1163 770 HOH HOH . S 9 HOH A 64 1164 389 HOH HOH . S 9 HOH A 65 1165 760 HOH HOH . S 9 HOH A 66 1166 391 HOH HOH . S 9 HOH A 67 1167 393 HOH HOH . S 9 HOH A 68 1168 782 HOH HOH . S 9 HOH A 69 1169 166 HOH HOH . S 9 HOH A 70 1170 395 HOH HOH . S 9 HOH A 71 1171 729 HOH HOH . S 9 HOH A 72 1172 123 HOH HOH . S 9 HOH A 73 1173 356 HOH HOH . S 9 HOH A 74 1174 392 HOH HOH . S 9 HOH A 75 1175 721 HOH HOH . S 9 HOH A 76 1176 303 HOH HOH . S 9 HOH A 77 1177 789 HOH HOH . S 9 HOH A 78 1178 51 HOH HOH . S 9 HOH A 79 1179 302 HOH HOH . S 9 HOH A 80 1180 246 HOH HOH . S 9 HOH A 81 1181 397 HOH HOH . S 9 HOH A 82 1182 803 HOH HOH . S 9 HOH A 83 1183 359 HOH HOH . S 9 HOH A 84 1184 257 HOH HOH . S 9 HOH A 85 1185 799 HOH HOH . S 9 HOH A 86 1186 213 HOH HOH . T 9 HOH B 1 601 299 HOH HOH . T 9 HOH B 2 602 353 HOH HOH . T 9 HOH B 3 603 604 HOH HOH . T 9 HOH B 4 604 630 HOH HOH . T 9 HOH B 5 605 396 HOH HOH . T 9 HOH B 6 606 643 HOH HOH . T 9 HOH B 7 607 180 HOH HOH . T 9 HOH B 8 608 159 HOH HOH . T 9 HOH B 9 609 271 HOH HOH . T 9 HOH B 10 610 370 HOH HOH . T 9 HOH B 11 611 372 HOH HOH . T 9 HOH B 12 612 656 HOH HOH . T 9 HOH B 13 613 639 HOH HOH . T 9 HOH B 14 614 702 HOH HOH . T 9 HOH B 15 615 155 HOH HOH . T 9 HOH B 16 616 312 HOH HOH . T 9 HOH B 17 617 181 HOH HOH . T 9 HOH B 18 618 645 HOH HOH . T 9 HOH B 19 619 682 HOH HOH . T 9 HOH B 20 620 623 HOH HOH . T 9 HOH B 21 621 657 HOH HOH . T 9 HOH B 22 622 384 HOH HOH . T 9 HOH B 23 623 681 HOH HOH . T 9 HOH B 24 624 683 HOH HOH . T 9 HOH B 25 625 678 HOH HOH . T 9 HOH B 26 626 304 HOH HOH . T 9 HOH B 27 627 300 HOH HOH . T 9 HOH B 28 628 703 HOH HOH . T 9 HOH B 29 629 49 HOH HOH . T 9 HOH B 30 630 666 HOH HOH . T 9 HOH B 31 631 677 HOH HOH . T 9 HOH B 32 632 305 HOH HOH . T 9 HOH B 33 633 174 HOH HOH . T 9 HOH B 34 634 343 HOH HOH . T 9 HOH B 35 635 74 HOH HOH . T 9 HOH B 36 636 660 HOH HOH . T 9 HOH B 37 637 46 HOH HOH . T 9 HOH B 38 638 399 HOH HOH . T 9 HOH B 39 639 348 HOH HOH . T 9 HOH B 40 640 386 HOH HOH . T 9 HOH B 41 641 1 HOH HOH . T 9 HOH B 42 642 609 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . I 6 31.234 76.646 50.178 1 79.59 ? P PO4 1007 A 1 HETATM 2 O O1 PO4 . . . I 6 31.414 76.319 48.622 1 78.87 ? O1 PO4 1007 A 1 HETATM 3 O O2 PO4 . . . I 6 30.591 78.1 50.352 1 79.52 ? O2 PO4 1007 A 1 HETATM 4 O O3 PO4 . . . I 6 32.654 76.678 50.856 1 80.67 ? O3 PO4 1007 A 1 HETATM 5 O O4 PO4 . . . I 6 30.375 75.518 50.92 1 78.79 ? O4 PO4 1007 A 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #