data_7P31
#
_model_server_result.job_id            T29kWxI9P2egyfKSJVxOUQ 
_model_server_result.datetime_utc      '2024-11-14 20:30:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7p31 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"R","auth_seq_id":507}' 
#
_entry.id    7P31 
#
_exptl.entry_id    7P31 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              126.904 
_entity.id                          8 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'IODIDE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7P31 
_cell.length_a            79.979 
_cell.length_b            102.575 
_cell.length_c            103.829 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7P31 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,K,S 1 1 
B,L,M,N,O,P,Q,R,T 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      8 
_struct_asym.id                             R 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C PRO 364 A PRO 390 1_555 A N CSX 365 A CSX 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? 
covale ? covale2 A C CSX 365 A CSX 391 1_555 A N LYS 366 A LYS 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale3 B C PRO 364 B PRO 390 1_555 B N CSX 365 B CSX 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale4 B C CSX 365 B CSX 391 1_555 B N LYS 366 B LYS 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? 
#
_chem_comp.formula           'I -1' 
_chem_comp.formula_weight    126.904 
_chem_comp.id                IOD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'IODIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7P31 
_atom_sites.fract_transf_matrix[1][1]    0.012503 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009749 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009631 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PG4 A 1 1001 1001 PG4 PG4 . 
D 3 AN2 A 1 1002 1301 AN2 AN2 . 
E 4 GOL A 1 1003 1501 GOL GOL . 
F 5 PYZ A 1 504 1701 PYZ LIG . 
G 4 GOL A 1 1005 1801 GOL GOL . 
H 4 GOL A 1 1006 1901 GOL GOL . 
I 6 PO4 A 1 1007 1 PO4 PO4 . 
J 7 CL A 1 1008 1 CL CL . 
K 7 CL A 1 1009 2 CL CL . 
L 4 GOL B 1 501 503 GOL GOL . 
M 3 AN2 B 1 502 1101 AN2 AN2 . 
N 4 GOL B 1 503 1401 GOL GOL . 
O 5 PYZ B 1 504 1701 PYZ LIG . 
P 4 GOL B 1 505 2001 GOL GOL . 
Q 6 PO4 B 1 506 2 PO4 PO4 . 
R 8 IOD B 1 507 1 IOD IOD . 
S 9 HOH A 1 1101 76 HOH HOH . 
S 9 HOH A 2 1102 363 HOH HOH . 
S 9 HOH A 3 1103 687 HOH HOH . 
S 9 HOH A 4 1104 634 HOH HOH . 
S 9 HOH A 5 1105 608 HOH HOH . 
S 9 HOH A 6 1106 624 HOH HOH . 
S 9 HOH A 7 1107 362 HOH HOH . 
S 9 HOH A 8 1108 351 HOH HOH . 
S 9 HOH A 9 1109 679 HOH HOH . 
S 9 HOH A 10 1110 350 HOH HOH . 
S 9 HOH A 11 1111 611 HOH HOH . 
S 9 HOH A 12 1112 394 HOH HOH . 
S 9 HOH A 13 1113 114 HOH HOH . 
S 9 HOH A 14 1114 642 HOH HOH . 
S 9 HOH A 15 1115 361 HOH HOH . 
S 9 HOH A 16 1116 699 HOH HOH . 
S 9 HOH A 17 1117 728 HOH HOH . 
S 9 HOH A 18 1118 707 HOH HOH . 
S 9 HOH A 19 1119 695 HOH HOH . 
S 9 HOH A 20 1120 680 HOH HOH . 
S 9 HOH A 21 1121 653 HOH HOH . 
S 9 HOH A 22 1122 133 HOH HOH . 
S 9 HOH A 23 1123 21 HOH HOH . 
S 9 HOH A 24 1124 701 HOH HOH . 
S 9 HOH A 25 1125 658 HOH HOH . 
S 9 HOH A 26 1126 712 HOH HOH . 
S 9 HOH A 27 1127 708 HOH HOH . 
S 9 HOH A 28 1128 13 HOH HOH . 
S 9 HOH A 29 1129 715 HOH HOH . 
S 9 HOH A 30 1130 636 HOH HOH . 
S 9 HOH A 31 1131 675 HOH HOH . 
S 9 HOH A 32 1132 692 HOH HOH . 
S 9 HOH A 33 1133 286 HOH HOH . 
S 9 HOH A 34 1134 306 HOH HOH . 
S 9 HOH A 35 1135 776 HOH HOH . 
S 9 HOH A 36 1136 689 HOH HOH . 
S 9 HOH A 37 1137 656 HOH HOH . 
S 9 HOH A 38 1138 720 HOH HOH . 
S 9 HOH A 39 1139 172 HOH HOH . 
S 9 HOH A 40 1140 388 HOH HOH . 
S 9 HOH A 41 1141 255 HOH HOH . 
S 9 HOH A 42 1142 625 HOH HOH . 
S 9 HOH A 43 1143 292 HOH HOH . 
S 9 HOH A 44 1144 668 HOH HOH . 
S 9 HOH A 45 1145 659 HOH HOH . 
S 9 HOH A 46 1146 734 HOH HOH . 
S 9 HOH A 47 1147 93 HOH HOH . 
S 9 HOH A 48 1148 686 HOH HOH . 
S 9 HOH A 49 1149 314 HOH HOH . 
S 9 HOH A 50 1150 768 HOH HOH . 
S 9 HOH A 51 1151 344 HOH HOH . 
S 9 HOH A 52 1152 301 HOH HOH . 
S 9 HOH A 53 1153 243 HOH HOH . 
S 9 HOH A 54 1154 726 HOH HOH . 
S 9 HOH A 55 1155 334 HOH HOH . 
S 9 HOH A 56 1156 398 HOH HOH . 
S 9 HOH A 57 1157 390 HOH HOH . 
S 9 HOH A 58 1158 222 HOH HOH . 
S 9 HOH A 59 1159 752 HOH HOH . 
S 9 HOH A 60 1160 759 HOH HOH . 
S 9 HOH A 61 1161 741 HOH HOH . 
S 9 HOH A 62 1162 387 HOH HOH . 
S 9 HOH A 63 1163 770 HOH HOH . 
S 9 HOH A 64 1164 389 HOH HOH . 
S 9 HOH A 65 1165 760 HOH HOH . 
S 9 HOH A 66 1166 391 HOH HOH . 
S 9 HOH A 67 1167 393 HOH HOH . 
S 9 HOH A 68 1168 782 HOH HOH . 
S 9 HOH A 69 1169 166 HOH HOH . 
S 9 HOH A 70 1170 395 HOH HOH . 
S 9 HOH A 71 1171 729 HOH HOH . 
S 9 HOH A 72 1172 123 HOH HOH . 
S 9 HOH A 73 1173 356 HOH HOH . 
S 9 HOH A 74 1174 392 HOH HOH . 
S 9 HOH A 75 1175 721 HOH HOH . 
S 9 HOH A 76 1176 303 HOH HOH . 
S 9 HOH A 77 1177 789 HOH HOH . 
S 9 HOH A 78 1178 51 HOH HOH . 
S 9 HOH A 79 1179 302 HOH HOH . 
S 9 HOH A 80 1180 246 HOH HOH . 
S 9 HOH A 81 1181 397 HOH HOH . 
S 9 HOH A 82 1182 803 HOH HOH . 
S 9 HOH A 83 1183 359 HOH HOH . 
S 9 HOH A 84 1184 257 HOH HOH . 
S 9 HOH A 85 1185 799 HOH HOH . 
S 9 HOH A 86 1186 213 HOH HOH . 
T 9 HOH B 1 601 299 HOH HOH . 
T 9 HOH B 2 602 353 HOH HOH . 
T 9 HOH B 3 603 604 HOH HOH . 
T 9 HOH B 4 604 630 HOH HOH . 
T 9 HOH B 5 605 396 HOH HOH . 
T 9 HOH B 6 606 643 HOH HOH . 
T 9 HOH B 7 607 180 HOH HOH . 
T 9 HOH B 8 608 159 HOH HOH . 
T 9 HOH B 9 609 271 HOH HOH . 
T 9 HOH B 10 610 370 HOH HOH . 
T 9 HOH B 11 611 372 HOH HOH . 
T 9 HOH B 12 612 656 HOH HOH . 
T 9 HOH B 13 613 639 HOH HOH . 
T 9 HOH B 14 614 702 HOH HOH . 
T 9 HOH B 15 615 155 HOH HOH . 
T 9 HOH B 16 616 312 HOH HOH . 
T 9 HOH B 17 617 181 HOH HOH . 
T 9 HOH B 18 618 645 HOH HOH . 
T 9 HOH B 19 619 682 HOH HOH . 
T 9 HOH B 20 620 623 HOH HOH . 
T 9 HOH B 21 621 657 HOH HOH . 
T 9 HOH B 22 622 384 HOH HOH . 
T 9 HOH B 23 623 681 HOH HOH . 
T 9 HOH B 24 624 683 HOH HOH . 
T 9 HOH B 25 625 678 HOH HOH . 
T 9 HOH B 26 626 304 HOH HOH . 
T 9 HOH B 27 627 300 HOH HOH . 
T 9 HOH B 28 628 703 HOH HOH . 
T 9 HOH B 29 629 49 HOH HOH . 
T 9 HOH B 30 630 666 HOH HOH . 
T 9 HOH B 31 631 677 HOH HOH . 
T 9 HOH B 32 632 305 HOH HOH . 
T 9 HOH B 33 633 174 HOH HOH . 
T 9 HOH B 34 634 343 HOH HOH . 
T 9 HOH B 35 635 74 HOH HOH . 
T 9 HOH B 36 636 660 HOH HOH . 
T 9 HOH B 37 637 46 HOH HOH . 
T 9 HOH B 38 638 399 HOH HOH . 
T 9 HOH B 39 639 348 HOH HOH . 
T 9 HOH B 40 640 386 HOH HOH . 
T 9 HOH B 41 641 1 HOH HOH . 
T 9 HOH B 42 642 609 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           I 
_atom_site.label_atom_id         I 
_atom_site.label_comp_id         IOD 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         R 
_atom_site.label_entity_id       8 
_atom_site.Cartn_x               54.262 
_atom_site.Cartn_y               75.158 
_atom_site.Cartn_z               4.138 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        167.69 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          I 
_atom_site.auth_comp_id          IOD 
_atom_site.auth_seq_id           507 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           467 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#