data_7P3E # _model_server_result.job_id wVIfcG6-nfZa1gMd2LhuTQ _model_server_result.datetime_utc '2024-12-28 03:41:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7p3e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"X","auth_seq_id":305}' # _entry.id 7P3E # _exptl.entry_id 7P3E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 24 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7P3E _cell.length_a 85.802 _cell.length_b 85.802 _cell.length_c 217.564 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7P3E _symmetry.cell_setting ? _symmetry.Int_Tables_number 153 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 1 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,J,K,L,M,N,O,P,Q,R,S,GA,HA,IA 1 1 D,E,F,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,JA,KA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 P N N ? 4 Q N N ? 4 R N N ? 4 S N N ? 4 T N N ? 4 U N N ? 4 V N N ? 4 W N N ? 4 X N N ? 4 Y N N ? 4 Z N N ? 4 BA N N ? 4 CA N N ? 4 DA N N ? 4 EA N N ? 4 FA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 101 A CYS 101 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? disulf ? disulf2 A SG CYS 203 A CYS 203 1_555 A SG CYS 259 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf3 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.945 ? disulf ? disulf4 D SG CYS 101 D CYS 101 1_555 D SG CYS 164 D CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? disulf ? disulf5 D SG CYS 203 D CYS 203 1_555 D SG CYS 259 D CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? disulf ? disulf6 E SG CYS 26 E CYS 25 1_555 E SG CYS 81 E CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7P3E _atom_sites.fract_transf_matrix[1][1] 0.011655 _atom_sites.fract_transf_matrix[1][2] 0.006729 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013458 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004596 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 IOD A 1 301 7 IOD IOD . H 4 IOD A 1 302 8 IOD IOD . I 4 IOD A 1 303 11 IOD IOD . J 4 IOD A 1 304 13 IOD IOD . K 4 IOD A 1 305 15 IOD IOD . L 4 IOD A 1 306 17 IOD IOD . M 4 IOD A 1 307 21 IOD IOD . N 4 IOD A 1 308 23 IOD IOD . O 5 PEG A 1 309 2 PEG PEG . P 4 IOD B 1 101 3 IOD IOD . Q 4 IOD B 1 102 14 IOD IOD . R 4 IOD B 1 103 24 IOD IOD . S 4 IOD C 1 101 6 IOD IOD . T 4 IOD D 1 301 2 IOD IOD . U 4 IOD D 1 302 4 IOD IOD . V 4 IOD D 1 303 9 IOD IOD . W 4 IOD D 1 304 12 IOD IOD . X 4 IOD D 1 305 16 IOD IOD . Y 4 IOD D 1 306 18 IOD IOD . Z 4 IOD D 1 307 19 IOD IOD . AA 5 PEG D 1 308 1 PEG PEG . BA 4 IOD E 1 101 5 IOD IOD . CA 4 IOD E 1 102 20 IOD IOD . DA 4 IOD F 1 101 1 IOD IOD . EA 4 IOD F 1 102 10 IOD IOD . FA 4 IOD F 1 103 22 IOD IOD . GA 6 HOH A 1 401 123 HOH HOH . GA 6 HOH A 2 402 116 HOH HOH . GA 6 HOH A 3 403 109 HOH HOH . GA 6 HOH A 4 404 118 HOH HOH . GA 6 HOH A 5 405 96 HOH HOH . GA 6 HOH A 6 406 43 HOH HOH . GA 6 HOH A 7 407 1 HOH HOH . GA 6 HOH A 8 408 69 HOH HOH . GA 6 HOH A 9 409 114 HOH HOH . GA 6 HOH A 10 410 35 HOH HOH . GA 6 HOH A 11 411 47 HOH HOH . GA 6 HOH A 12 412 113 HOH HOH . GA 6 HOH A 13 413 66 HOH HOH . GA 6 HOH A 14 414 90 HOH HOH . GA 6 HOH A 15 415 129 HOH HOH . GA 6 HOH A 16 416 78 HOH HOH . GA 6 HOH A 17 417 120 HOH HOH . GA 6 HOH A 18 418 103 HOH HOH . GA 6 HOH A 19 419 52 HOH HOH . GA 6 HOH A 20 420 55 HOH HOH . GA 6 HOH A 21 421 18 HOH HOH . GA 6 HOH A 22 422 97 HOH HOH . GA 6 HOH A 23 423 17 HOH HOH . GA 6 HOH A 24 424 81 HOH HOH . GA 6 HOH A 25 425 83 HOH HOH . GA 6 HOH A 26 426 59 HOH HOH . GA 6 HOH A 27 427 87 HOH HOH . GA 6 HOH A 28 428 26 HOH HOH . GA 6 HOH A 29 429 4 HOH HOH . GA 6 HOH A 30 430 48 HOH HOH . GA 6 HOH A 31 431 70 HOH HOH . GA 6 HOH A 32 432 135 HOH HOH . GA 6 HOH A 33 433 2 HOH HOH . GA 6 HOH A 34 434 33 HOH HOH . GA 6 HOH A 35 435 58 HOH HOH . GA 6 HOH A 36 436 36 HOH HOH . GA 6 HOH A 37 437 22 HOH HOH . GA 6 HOH A 38 438 56 HOH HOH . GA 6 HOH A 39 439 57 HOH HOH . GA 6 HOH A 40 440 85 HOH HOH . GA 6 HOH A 41 441 40 HOH HOH . GA 6 HOH A 42 442 11 HOH HOH . GA 6 HOH A 43 443 106 HOH HOH . GA 6 HOH A 44 444 134 HOH HOH . GA 6 HOH A 45 445 30 HOH HOH . GA 6 HOH A 46 446 8 HOH HOH . GA 6 HOH A 47 447 111 HOH HOH . GA 6 HOH A 48 448 64 HOH HOH . GA 6 HOH A 49 449 104 HOH HOH . GA 6 HOH A 50 450 9 HOH HOH . GA 6 HOH A 51 451 23 HOH HOH . GA 6 HOH A 52 452 82 HOH HOH . GA 6 HOH A 53 453 102 HOH HOH . GA 6 HOH A 54 454 130 HOH HOH . GA 6 HOH A 55 455 125 HOH HOH . GA 6 HOH A 56 456 128 HOH HOH . GA 6 HOH A 57 457 75 HOH HOH . GA 6 HOH A 58 458 132 HOH HOH . GA 6 HOH A 59 459 131 HOH HOH . HA 6 HOH B 1 201 95 HOH HOH . HA 6 HOH B 2 202 53 HOH HOH . HA 6 HOH B 3 203 126 HOH HOH . HA 6 HOH B 4 204 41 HOH HOH . HA 6 HOH B 5 205 127 HOH HOH . HA 6 HOH B 6 206 91 HOH HOH . HA 6 HOH B 7 207 28 HOH HOH . HA 6 HOH B 8 208 108 HOH HOH . HA 6 HOH B 9 209 101 HOH HOH . HA 6 HOH B 10 210 19 HOH HOH . HA 6 HOH B 11 211 21 HOH HOH . HA 6 HOH B 12 212 29 HOH HOH . HA 6 HOH B 13 213 100 HOH HOH . HA 6 HOH B 14 214 107 HOH HOH . HA 6 HOH B 15 215 15 HOH HOH . HA 6 HOH B 16 216 44 HOH HOH . HA 6 HOH B 17 217 49 HOH HOH . HA 6 HOH B 18 218 24 HOH HOH . HA 6 HOH B 19 219 31 HOH HOH . IA 6 HOH C 1 201 63 HOH HOH . JA 6 HOH D 1 401 124 HOH HOH . JA 6 HOH D 2 402 88 HOH HOH . JA 6 HOH D 3 403 6 HOH HOH . JA 6 HOH D 4 404 77 HOH HOH . JA 6 HOH D 5 405 86 HOH HOH . JA 6 HOH D 6 406 34 HOH HOH . JA 6 HOH D 7 407 80 HOH HOH . JA 6 HOH D 8 408 20 HOH HOH . JA 6 HOH D 9 409 62 HOH HOH . JA 6 HOH D 10 410 65 HOH HOH . JA 6 HOH D 11 411 133 HOH HOH . JA 6 HOH D 12 412 5 HOH HOH . JA 6 HOH D 13 413 74 HOH HOH . JA 6 HOH D 14 414 25 HOH HOH . JA 6 HOH D 15 415 110 HOH HOH . JA 6 HOH D 16 416 67 HOH HOH . JA 6 HOH D 17 417 68 HOH HOH . JA 6 HOH D 18 418 60 HOH HOH . JA 6 HOH D 19 419 93 HOH HOH . JA 6 HOH D 20 420 61 HOH HOH . JA 6 HOH D 21 421 89 HOH HOH . JA 6 HOH D 22 422 37 HOH HOH . JA 6 HOH D 23 423 73 HOH HOH . JA 6 HOH D 24 424 14 HOH HOH . JA 6 HOH D 25 425 50 HOH HOH . JA 6 HOH D 26 426 71 HOH HOH . JA 6 HOH D 27 427 92 HOH HOH . JA 6 HOH D 28 428 54 HOH HOH . JA 6 HOH D 29 429 79 HOH HOH . JA 6 HOH D 30 430 16 HOH HOH . JA 6 HOH D 31 431 122 HOH HOH . JA 6 HOH D 32 432 3 HOH HOH . JA 6 HOH D 33 433 32 HOH HOH . JA 6 HOH D 34 434 27 HOH HOH . JA 6 HOH D 35 435 72 HOH HOH . JA 6 HOH D 36 436 12 HOH HOH . JA 6 HOH D 37 437 84 HOH HOH . JA 6 HOH D 38 438 39 HOH HOH . JA 6 HOH D 39 439 7 HOH HOH . JA 6 HOH D 40 440 94 HOH HOH . JA 6 HOH D 41 441 98 HOH HOH . JA 6 HOH D 42 442 76 HOH HOH . JA 6 HOH D 43 443 115 HOH HOH . JA 6 HOH D 44 444 119 HOH HOH . KA 6 HOH E 1 201 38 HOH HOH . KA 6 HOH E 2 202 51 HOH HOH . KA 6 HOH E 3 203 112 HOH HOH . KA 6 HOH E 4 204 99 HOH HOH . KA 6 HOH E 5 205 13 HOH HOH . KA 6 HOH E 6 206 45 HOH HOH . KA 6 HOH E 7 207 46 HOH HOH . KA 6 HOH E 8 208 105 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id X _atom_site.label_entity_id 4 _atom_site.Cartn_x 29.823 _atom_site.Cartn_y -4.287 _atom_site.Cartn_z 52.562 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 59.69 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 305 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #