data_7P8G # _model_server_result.job_id F_M_1vhw8_48Nj-7KyUqYw _model_server_result.datetime_utc '2024-12-21 12:35:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7p8g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 7P8G # _exptl.entry_id 7P8G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description beta-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7P8G _cell.length_a 101.423 _cell.length_b 101.423 _cell.length_c 122.625 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7P8G _symmetry.cell_setting ? _symmetry.Int_Tables_number 80 _symmetry.space_group_name_Hall 'I 4bw' _symmetry.space_group_name_H-M 'I 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 0 -101.423 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id BGC _chem_comp.mon_nstd_flag . _chem_comp.name beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms beta-D-glucose;D-glucose;glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 BGC sing 70 n n C2 C1 BGC sing 71 n n C2 O2 BGC sing 72 n n C2 H2 BGC sing 73 n n C3 C4 BGC sing 74 n n C3 O3 BGC sing 75 n n C3 H3 BGC sing 76 n n C4 C5 BGC sing 77 n n C4 O4 BGC sing 78 n n C4 H4 BGC sing 79 n n C5 C6 BGC sing 80 n n C5 O5 BGC sing 81 n n C5 H5 BGC sing 82 n n C6 O6 BGC sing 83 n n C6 H61 BGC sing 84 n n C6 H62 BGC sing 85 n n C1 O1 BGC sing 86 n n C1 O5 BGC sing 87 n n C1 H1 BGC sing 88 n n O1 HO1 BGC sing 89 n n O2 HO2 BGC sing 90 n n O3 HO3 BGC sing 91 n n O4 HO4 BGC sing 92 n n O6 HO6 BGC sing 93 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version BGC DGlcpb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 BGC b-D-glucopyranose 'COMMON NAME' GMML 1 BGC b-D-Glcp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 BGC Glc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 7P8G _atom_sites.fract_transf_matrix[1][1] 0.00986 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00986 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008155 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 401 322 CL CL . C 3 BGC A 1 402 1 BGC BGC . D 2 CL A 1 403 2 CL CL . E 2 CL A 1 404 3 CL CL . F 2 CL A 1 405 4 CL CL . G 4 MLI A 1 406 1 MLI MLI . H 5 HOH A 1 501 79 HOH HOH . H 5 HOH A 2 502 56 HOH HOH . H 5 HOH A 3 503 17 HOH HOH . H 5 HOH A 4 504 53 HOH HOH . H 5 HOH A 5 505 54 HOH HOH . H 5 HOH A 6 506 8 HOH HOH . H 5 HOH A 7 507 58 HOH HOH . H 5 HOH A 8 508 3 HOH HOH . H 5 HOH A 9 509 35 HOH HOH . H 5 HOH A 10 510 40 HOH HOH . H 5 HOH A 11 511 71 HOH HOH . H 5 HOH A 12 512 67 HOH HOH . H 5 HOH A 13 513 72 HOH HOH . H 5 HOH A 14 514 49 HOH HOH . H 5 HOH A 15 515 55 HOH HOH . H 5 HOH A 16 516 36 HOH HOH . H 5 HOH A 17 517 73 HOH HOH . H 5 HOH A 18 518 14 HOH HOH . H 5 HOH A 19 519 76 HOH HOH . H 5 HOH A 20 520 60 HOH HOH . H 5 HOH A 21 521 19 HOH HOH . H 5 HOH A 22 522 15 HOH HOH . H 5 HOH A 23 523 20 HOH HOH . H 5 HOH A 24 524 59 HOH HOH . H 5 HOH A 25 525 12 HOH HOH . H 5 HOH A 26 526 33 HOH HOH . H 5 HOH A 27 527 84 HOH HOH . H 5 HOH A 28 528 52 HOH HOH . H 5 HOH A 29 529 64 HOH HOH . H 5 HOH A 30 530 43 HOH HOH . H 5 HOH A 31 531 24 HOH HOH . H 5 HOH A 32 532 65 HOH HOH . H 5 HOH A 33 533 69 HOH HOH . H 5 HOH A 34 534 6 HOH HOH . H 5 HOH A 35 535 29 HOH HOH . H 5 HOH A 36 536 2 HOH HOH . H 5 HOH A 37 537 68 HOH HOH . H 5 HOH A 38 538 97 HOH HOH . H 5 HOH A 39 539 4 HOH HOH . H 5 HOH A 40 540 61 HOH HOH . H 5 HOH A 41 541 95 HOH HOH . H 5 HOH A 42 542 70 HOH HOH . H 5 HOH A 43 543 5 HOH HOH . H 5 HOH A 44 544 44 HOH HOH . H 5 HOH A 45 545 39 HOH HOH . H 5 HOH A 46 546 13 HOH HOH . H 5 HOH A 47 547 28 HOH HOH . H 5 HOH A 48 548 23 HOH HOH . H 5 HOH A 49 549 34 HOH HOH . H 5 HOH A 50 550 21 HOH HOH . H 5 HOH A 51 551 30 HOH HOH . H 5 HOH A 52 552 66 HOH HOH . H 5 HOH A 53 553 41 HOH HOH . H 5 HOH A 54 554 42 HOH HOH . H 5 HOH A 55 555 48 HOH HOH . H 5 HOH A 56 556 94 HOH HOH . H 5 HOH A 57 557 10 HOH HOH . H 5 HOH A 58 558 37 HOH HOH . H 5 HOH A 59 559 11 HOH HOH . H 5 HOH A 60 560 88 HOH HOH . H 5 HOH A 61 561 38 HOH HOH . H 5 HOH A 62 562 25 HOH HOH . H 5 HOH A 63 563 16 HOH HOH . H 5 HOH A 64 564 46 HOH HOH . H 5 HOH A 65 565 93 HOH HOH . H 5 HOH A 66 566 91 HOH HOH . H 5 HOH A 67 567 27 HOH HOH . H 5 HOH A 68 568 1 HOH HOH . H 5 HOH A 69 569 80 HOH HOH . H 5 HOH A 70 570 63 HOH HOH . H 5 HOH A 71 571 51 HOH HOH . H 5 HOH A 72 572 22 HOH HOH . H 5 HOH A 73 573 7 HOH HOH . H 5 HOH A 74 574 96 HOH HOH . H 5 HOH A 75 575 90 HOH HOH . H 5 HOH A 76 576 26 HOH HOH . H 5 HOH A 77 577 9 HOH HOH . H 5 HOH A 78 578 62 HOH HOH . H 5 HOH A 79 579 47 HOH HOH . H 5 HOH A 80 580 31 HOH HOH . H 5 HOH A 81 581 78 HOH HOH . H 5 HOH A 82 582 77 HOH HOH . H 5 HOH A 83 583 50 HOH HOH . H 5 HOH A 84 584 83 HOH HOH . H 5 HOH A 85 585 32 HOH HOH . H 5 HOH A 86 586 45 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 BGC . . . C 3 5.003 -37.57 -39.368 0.84 65.1 ? C2 BGC 402 A 1 HETATM 2 C C3 BGC . . . C 3 6.149 -36.924 -38.575 0.84 62.69 ? C3 BGC 402 A 1 HETATM 3 C C4 BGC . . . C 3 7.016 -37.928 -37.803 0.84 61.92 ? C4 BGC 402 A 1 HETATM 4 C C5 BGC . . . C 3 6.188 -38.991 -37.079 0.84 64.45 ? C5 BGC 402 A 1 HETATM 5 C C6 BGC . . . C 3 6.367 -38.993 -35.575 0.84 59.33 ? C6 BGC 402 A 1 HETATM 6 C C1 BGC . . . C 3 4.509 -38.85 -38.71 0.84 64.06 ? C1 BGC 402 A 1 HETATM 7 O O1 BGC . . . C 3 3.141 -39.006 -38.915 0.84 59.28 ? O1 BGC 402 A 1 HETATM 8 O O2 BGC . . . C 3 5.433 -37.838 -40.697 0.84 66.62 ? O2 BGC 402 A 1 HETATM 9 O O3 BGC . . . C 3 5.642 -35.901 -37.728 0.84 56.34 ? O3 BGC 402 A 1 HETATM 10 O O4 BGC . . . C 3 7.926 -38.583 -38.679 0.84 65.58 ? O4 BGC 402 A 1 HETATM 11 O O5 BGC . . . C 3 4.796 -38.796 -37.333 0.84 65.18 ? O5 BGC 402 A 1 HETATM 12 O O6 BGC . . . C 3 7.622 -38.44 -35.204 0.84 56.94 ? O6 BGC 402 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #