data_7PB0 # _model_server_result.job_id WZdwd-l3ac-jN0AVZauvNw _model_server_result.datetime_utc '2024-11-02 19:39:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7pb0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":403}' # _entry.id 7PB0 # _exptl.entry_id 7PB0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7PB0 _cell.length_a 185.119 _cell.length_b 185.119 _cell.length_c 113.062 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PB0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 11_566 x-y+2/3,-y+4/3,-z+4/3 1 0 0 0 -1 0 0 0 -1 0 213.757009 150.749333 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 41 A ASP 34 1_555 E MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.975 ? metalc ? metalc2 C O7 ISY . A ISY 401 1_555 E MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.946 ? metalc ? metalc3 D O1A GGS . A GGS 402 1_555 E MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc4 D O1B GGS . A GGS 402 1_555 E MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.951 ? metalc ? metalc5 E MG MG . A MG 403 1_555 F O HOH . A HOH 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc6 E MG MG . A MG 403 1_555 F O HOH . A HOH 535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7PB0 _atom_sites.fract_transf_matrix[1][1] 0.005402 _atom_sites.fract_transf_matrix[1][2] 0.003119 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006238 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008845 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ISY A 1 401 1 ISY ISY . D 4 GGS A 1 402 1 GGS GGS . E 5 MG A 1 403 1 MG MG . F 6 HOH A 1 501 130 HOH HOH . F 6 HOH A 2 502 20 HOH HOH . F 6 HOH A 3 503 82 HOH HOH . F 6 HOH A 4 504 58 HOH HOH . F 6 HOH A 5 505 116 HOH HOH . F 6 HOH A 6 506 13 HOH HOH . F 6 HOH A 7 507 56 HOH HOH . F 6 HOH A 8 508 98 HOH HOH . F 6 HOH A 9 509 46 HOH HOH . F 6 HOH A 10 510 2 HOH HOH . F 6 HOH A 11 511 73 HOH HOH . F 6 HOH A 12 512 103 HOH HOH . F 6 HOH A 13 513 107 HOH HOH . F 6 HOH A 14 514 10 HOH HOH . F 6 HOH A 15 515 15 HOH HOH . F 6 HOH A 16 516 38 HOH HOH . F 6 HOH A 17 517 67 HOH HOH . F 6 HOH A 18 518 94 HOH HOH . F 6 HOH A 19 519 27 HOH HOH . F 6 HOH A 20 520 48 HOH HOH . F 6 HOH A 21 521 90 HOH HOH . F 6 HOH A 22 522 37 HOH HOH . F 6 HOH A 23 523 39 HOH HOH . F 6 HOH A 24 524 40 HOH HOH . F 6 HOH A 25 525 78 HOH HOH . F 6 HOH A 26 526 63 HOH HOH . F 6 HOH A 27 527 33 HOH HOH . F 6 HOH A 28 528 62 HOH HOH . F 6 HOH A 29 529 18 HOH HOH . F 6 HOH A 30 530 5 HOH HOH . F 6 HOH A 31 531 47 HOH HOH . F 6 HOH A 32 532 14 HOH HOH . F 6 HOH A 33 533 72 HOH HOH . F 6 HOH A 34 534 30 HOH HOH . F 6 HOH A 35 535 112 HOH HOH . F 6 HOH A 36 536 42 HOH HOH . F 6 HOH A 37 537 71 HOH HOH . F 6 HOH A 38 538 87 HOH HOH . F 6 HOH A 39 539 93 HOH HOH . F 6 HOH A 40 540 26 HOH HOH . F 6 HOH A 41 541 102 HOH HOH . F 6 HOH A 42 542 21 HOH HOH . F 6 HOH A 43 543 28 HOH HOH . F 6 HOH A 44 544 95 HOH HOH . F 6 HOH A 45 545 55 HOH HOH . F 6 HOH A 46 546 17 HOH HOH . F 6 HOH A 47 547 108 HOH HOH . F 6 HOH A 48 548 124 HOH HOH . F 6 HOH A 49 549 118 HOH HOH . F 6 HOH A 50 550 68 HOH HOH . F 6 HOH A 51 551 76 HOH HOH . F 6 HOH A 52 552 127 HOH HOH . F 6 HOH A 53 553 74 HOH HOH . F 6 HOH A 54 554 88 HOH HOH . F 6 HOH A 55 555 54 HOH HOH . F 6 HOH A 56 556 128 HOH HOH . F 6 HOH A 57 557 114 HOH HOH . F 6 HOH A 58 558 34 HOH HOH . F 6 HOH A 59 559 50 HOH HOH . F 6 HOH A 60 560 91 HOH HOH . F 6 HOH A 61 561 117 HOH HOH . F 6 HOH A 62 562 19 HOH HOH . F 6 HOH A 63 563 79 HOH HOH . F 6 HOH A 64 564 65 HOH HOH . F 6 HOH A 65 565 22 HOH HOH . F 6 HOH A 66 566 123 HOH HOH . F 6 HOH A 67 567 115 HOH HOH . F 6 HOH A 68 568 64 HOH HOH . F 6 HOH A 69 569 99 HOH HOH . F 6 HOH A 70 570 57 HOH HOH . F 6 HOH A 71 571 77 HOH HOH . F 6 HOH A 72 572 120 HOH HOH . F 6 HOH A 73 573 49 HOH HOH . F 6 HOH A 74 574 60 HOH HOH . F 6 HOH A 75 575 92 HOH HOH . F 6 HOH A 76 576 81 HOH HOH . F 6 HOH A 77 577 111 HOH HOH . F 6 HOH A 78 578 97 HOH HOH . F 6 HOH A 79 579 80 HOH HOH . F 6 HOH A 80 580 110 HOH HOH . F 6 HOH A 81 581 89 HOH HOH . F 6 HOH A 82 582 70 HOH HOH . F 6 HOH A 83 583 52 HOH HOH . F 6 HOH A 84 584 121 HOH HOH . F 6 HOH A 85 585 59 HOH HOH . F 6 HOH A 86 586 126 HOH HOH . G 6 HOH B 1 301 106 HOH HOH . G 6 HOH B 2 302 66 HOH HOH . G 6 HOH B 3 303 11 HOH HOH . G 6 HOH B 4 304 75 HOH HOH . G 6 HOH B 5 305 41 HOH HOH . G 6 HOH B 6 306 16 HOH HOH . G 6 HOH B 7 307 1 HOH HOH . G 6 HOH B 8 308 8 HOH HOH . G 6 HOH B 9 309 25 HOH HOH . G 6 HOH B 10 310 9 HOH HOH . G 6 HOH B 11 311 86 HOH HOH . G 6 HOH B 12 312 44 HOH HOH . G 6 HOH B 13 313 4 HOH HOH . G 6 HOH B 14 314 6 HOH HOH . G 6 HOH B 15 315 12 HOH HOH . G 6 HOH B 16 316 84 HOH HOH . G 6 HOH B 17 317 43 HOH HOH . G 6 HOH B 18 318 7 HOH HOH . G 6 HOH B 19 319 23 HOH HOH . G 6 HOH B 20 320 61 HOH HOH . G 6 HOH B 21 321 122 HOH HOH . G 6 HOH B 22 322 45 HOH HOH . G 6 HOH B 23 323 85 HOH HOH . G 6 HOH B 24 324 83 HOH HOH . G 6 HOH B 25 325 24 HOH HOH . G 6 HOH B 26 326 36 HOH HOH . G 6 HOH B 27 327 119 HOH HOH . G 6 HOH B 28 328 29 HOH HOH . G 6 HOH B 29 329 51 HOH HOH . G 6 HOH B 30 330 3 HOH HOH . G 6 HOH B 31 331 100 HOH HOH . G 6 HOH B 32 332 32 HOH HOH . G 6 HOH B 33 333 129 HOH HOH . G 6 HOH B 34 334 96 HOH HOH . G 6 HOH B 35 335 113 HOH HOH . G 6 HOH B 36 336 105 HOH HOH . G 6 HOH B 37 337 109 HOH HOH . G 6 HOH B 38 338 31 HOH HOH . G 6 HOH B 39 339 125 HOH HOH . G 6 HOH B 40 340 53 HOH HOH . G 6 HOH B 41 341 35 HOH HOH . G 6 HOH B 42 342 104 HOH HOH . G 6 HOH B 43 343 101 HOH HOH . G 6 HOH B 44 344 69 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 5 _atom_site.Cartn_x 30.855 _atom_site.Cartn_y 113.619 _atom_site.Cartn_z 26.17 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 42.75 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 351 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #