data_7PBI # _model_server_result.job_id -JC1O51FPTcLPnoTYvx79A _model_server_result.datetime_utc '2024-11-16 11:28:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7pbi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":602}' # _entry.id 7PBI # _exptl.entry_id 7PBI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 164.201 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ISOEUGENOL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7PBI _cell.length_a 67.586 _cell.length_b 228.209 _cell.length_c 300.824 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PBI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,I,J,K,L 1 1 C,D,M,N,O,P 2 1 E,F,Q,R,S,T 3 1 G,H,U,V 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 J N N ? 3 L N N ? 3 N N N ? 3 P N N ? 3 R N N ? 3 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NE2 HIS 395 A HIS 395 1_555 I C8M FAD . A FAD 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 B NE2 HIS 395 B HIS 395 1_555 K C8M FAD . B FAD 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale3 C NE2 HIS 395 C HIS 395 1_555 M C8M FAD . C FAD 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale4 D NE2 HIS 395 D HIS 395 1_555 O C8M FAD . D FAD 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale5 E NE2 HIS 395 E HIS 395 1_555 Q C8M FAD . E FAD 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale6 F NE2 HIS 395 F HIS 395 1_555 S C8M FAD . F FAD 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale7 G NE2 HIS 395 G HIS 395 1_555 U C8M FAD . G FAD 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 ? covale ? covale8 H NE2 HIS 395 H HIS 395 1_555 V C8M FAD . H FAD 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.297 ? # _chem_comp.formula 'C10 H12 O2' _chem_comp.formula_weight 164.201 _chem_comp.id H7Y _chem_comp.mon_nstd_flag . _chem_comp.name ISOEUGENOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CAD H7Y sing 220 n n CAD CAE H7Y doub 221 e n CAE CAJ H7Y sing 222 n n CAJ CAH H7Y sing 223 n y CAJ CAF H7Y doub 224 n y CAH CAL H7Y doub 225 n y CAF CAG H7Y sing 226 n y CAG CAK H7Y doub 227 n y CAK OAC H7Y sing 228 n n CAK CAL H7Y sing 229 n y CAL OAI H7Y sing 230 n n OAI CAB H7Y sing 231 n n CAA HAA1 H7Y sing 232 n n CAA HAA2 H7Y sing 233 n n CAA HAA3 H7Y sing 234 n n CAD HAD H7Y sing 235 n n CAE HAE H7Y sing 236 n n CAH HAH H7Y sing 237 n n CAF HAF H7Y sing 238 n n CAG HAG H7Y sing 239 n n OAC HAC H7Y sing 240 n n CAB HAB1 H7Y sing 241 n n CAB HAB2 H7Y sing 242 n n CAB HAB3 H7Y sing 243 n n # _atom_sites.entry_id 7PBI _atom_sites.fract_transf_matrix[1][1] 0.014796 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004382 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003324 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 FAD A 1 601 601 FAD FAD . J 3 H7Y A 1 602 701 H7Y H7Y . K 2 FAD B 1 601 601 FAD FAD . L 3 H7Y B 1 602 701 H7Y H7Y . M 2 FAD C 1 601 601 FAD FAD . N 3 H7Y C 1 602 701 H7Y H7Y . O 2 FAD D 1 601 601 FAD FAD . P 3 H7Y D 1 602 701 H7Y H7Y . Q 2 FAD E 1 601 601 FAD FAD . R 3 H7Y E 1 602 701 H7Y H7Y . S 2 FAD F 1 601 601 FAD FAD . T 3 H7Y F 1 602 701 H7Y H7Y . U 2 FAD G 1 601 601 FAD FAD . V 2 FAD H 1 601 601 FAD FAD . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA H7Y . . . J 3 5.508 45.228 20.981 1 80.37 ? CAA H7Y 602 A 1 HETATM 2 C CAD H7Y . . . J 3 5.704 44.219 22.053 1 73.98 ? CAD H7Y 602 A 1 HETATM 3 C CAE H7Y . . . J 3 6.766 43.161 21.819 1 73.39 ? CAE H7Y 602 A 1 HETATM 4 C CAJ H7Y . . . J 3 7.026 42.223 22.788 1 74.51 ? CAJ H7Y 602 A 1 HETATM 5 C CAH H7Y . . . J 3 6.156 42.202 23.847 1 72.97 ? CAH H7Y 602 A 1 HETATM 6 C CAF H7Y . . . J 3 8.11 41.347 22.723 1 73.62 ? CAF H7Y 602 A 1 HETATM 7 C CAG H7Y . . . J 3 8.304 40.433 23.744 1 73.14 ? CAG H7Y 602 A 1 HETATM 8 C CAK H7Y . . . J 3 7.42 40.417 24.81 1 78.87 ? CAK H7Y 602 A 1 HETATM 9 O OAC H7Y . . . J 3 7.59 39.516 25.813 1 85.3 ? OAC H7Y 602 A 1 HETATM 10 C CAL H7Y . . . J 3 6.334 41.312 24.867 1 78.57 ? CAL H7Y 602 A 1 HETATM 11 O OAI H7Y . . . J 3 5.457 41.291 25.919 1 83.96 ? OAI H7Y 602 A 1 HETATM 12 C CAB H7Y . . . J 3 4.261 42.117 25.819 1 87.71 ? CAB H7Y 602 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 36 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #