data_7PCF
#
_model_server_result.job_id            b7Yf8QeIjqPjAPu8Ho3Wyw 
_model_server_result.datetime_utc      '2024-11-24 02:07:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7pcf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":201}' 
#
_entry.id    7PCF 
#
_exptl.entry_id    7PCF 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 129 n n 
CHA C4D HEM doub 130 n n 
CHA HHA HEM sing 131 n n 
CHB C4A HEM sing 132 n n 
CHB C1B HEM doub 133 n n 
CHB HHB HEM sing 134 n n 
CHC C4B HEM sing 135 n n 
CHC C1C HEM doub 136 n n 
CHC HHC HEM sing 137 n n 
CHD C4C HEM doub 138 n n 
CHD C1D HEM sing 139 n n 
CHD HHD HEM sing 140 n n 
C1A C2A HEM doub 141 n y 
C1A NA HEM sing 142 n y 
C2A C3A HEM sing 143 n y 
C2A CAA HEM sing 144 n n 
C3A C4A HEM doub 145 n y 
C3A CMA HEM sing 146 n n 
C4A NA HEM sing 147 n y 
CMA HMA HEM sing 148 n n 
CMA HMAA HEM sing 149 n n 
CMA HMAB HEM sing 150 n n 
CAA CBA HEM sing 151 n n 
CAA HAA HEM sing 152 n n 
CAA HAAA HEM sing 153 n n 
CBA CGA HEM sing 154 n n 
CBA HBA HEM sing 155 n n 
CBA HBAA HEM sing 156 n n 
CGA O1A HEM doub 157 n n 
CGA O2A HEM sing 158 n n 
C1B C2B HEM sing 159 n n 
C1B NB HEM sing 160 n n 
C2B C3B HEM doub 161 n n 
C2B CMB HEM sing 162 n n 
C3B C4B HEM sing 163 n n 
C3B CAB HEM sing 164 n n 
C4B NB HEM doub 165 n n 
CMB HMB HEM sing 166 n n 
CMB HMBA HEM sing 167 n n 
CMB HMBB HEM sing 168 n n 
CAB CBB HEM doub 169 n n 
CAB HAB HEM sing 170 n n 
CBB HBB HEM sing 171 n n 
CBB HBBA HEM sing 172 n n 
C1C C2C HEM sing 173 n y 
C1C NC HEM sing 174 n y 
C2C C3C HEM doub 175 n y 
C2C CMC HEM sing 176 n n 
C3C C4C HEM sing 177 n y 
C3C CAC HEM sing 178 n n 
C4C NC HEM sing 179 n y 
CMC HMC HEM sing 180 n n 
CMC HMCA HEM sing 181 n n 
CMC HMCB HEM sing 182 n n 
CAC CBC HEM doub 183 n n 
CAC HAC HEM sing 184 n n 
CBC HBC HEM sing 185 n n 
CBC HBCA HEM sing 186 n n 
C1D C2D HEM sing 187 n n 
C1D ND HEM doub 188 n n 
C2D C3D HEM doub 189 n n 
C2D CMD HEM sing 190 n n 
C3D C4D HEM sing 191 n n 
C3D CAD HEM sing 192 n n 
C4D ND HEM sing 193 n n 
CMD HMD HEM sing 194 n n 
CMD HMDA HEM sing 195 n n 
CMD HMDB HEM sing 196 n n 
CAD CBD HEM sing 197 n n 
CAD HAD HEM sing 198 n n 
CAD HADA HEM sing 199 n n 
CBD CGD HEM sing 200 n n 
CBD HBD HEM sing 201 n n 
CBD HBDA HEM sing 202 n n 
CGD O1D HEM doub 203 n n 
CGD O2D HEM sing 204 n n 
O2A H2A HEM sing 205 n n 
O2D H2D HEM sing 206 n n 
FE NA HEM sing 207 n n 
FE NB HEM sing 208 n n 
FE NC HEM sing 209 n n 
FE ND HEM sing 210 n n 
#
_atom_sites.entry_id                     7PCF 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 4 HEM B 1 201 1 HEM HEM . 
F 4 HEM E 1 501 1 HEM HEM . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . E 4 127.773 144.253 109.506 1 405.65 0 CHA HEM 201 B 1 
HETATM 2 C CHB HEM . . . E 4 125.217 142.105 106.07 1 405.65 0 CHB HEM 201 B 1 
HETATM 3 C CHC HEM . . . E 4 127.649 144.567 102.747 1 405.65 0 CHC HEM 201 B 1 
HETATM 4 C CHD HEM . . . E 4 130.046 146.866 106.193 1 405.65 0 CHD HEM 201 B 1 
HETATM 5 C C1A HEM . . . E 4 126.863 143.448 108.882 1 405.65 0 C1A HEM 201 B 1 
HETATM 6 C C2A HEM . . . E 4 125.931 142.535 109.544 1 405.65 0 C2A HEM 201 B 1 
HETATM 7 C C3A HEM . . . E 4 125.22 141.934 108.584 1 405.65 0 C3A HEM 201 B 1 
HETATM 8 C C4A HEM . . . E 4 125.704 142.474 107.316 1 405.65 0 C4A HEM 201 B 1 
HETATM 9 C CMA HEM . . . E 4 124.135 140.908 108.723 1 405.65 0 CMA HEM 201 B 1 
HETATM 10 C CAA HEM . . . E 4 125.83 142.341 111.017 1 405.65 0 CAA HEM 201 B 1 
HETATM 11 C CBA HEM . . . E 4 124.652 143.22 111.514 1 405.65 0 CBA HEM 201 B 1 
HETATM 12 C CGA HEM . . . E 4 124.524 144.663 111.098 1 405.65 0 CGA HEM 201 B 1 
HETATM 13 O O1A HEM . . . E 4 124.882 145.526 111.929 1 405.65 0 O1A HEM 201 B 1 
HETATM 14 O O2A HEM . . . E 4 123.749 144.924 110.143 1 405.65 0 O2A HEM 201 B 1 
HETATM 15 C C1B HEM . . . E 4 125.64 142.563 104.862 1 405.65 0 C1B HEM 201 B 1 
HETATM 16 C C2B HEM . . . E 4 125.108 142.135 103.593 1 405.65 0 C2B HEM 201 B 1 
HETATM 17 C C3B HEM . . . E 4 125.794 142.835 102.653 1 405.65 0 C3B HEM 201 B 1 
HETATM 18 C C4B HEM . . . E 4 126.738 143.676 103.35 1 405.65 0 C4B HEM 201 B 1 
HETATM 19 C CMB HEM . . . E 4 124.008 141.117 103.405 1 405.65 0 CMB HEM 201 B 1 
HETATM 20 C CAB HEM . . . E 4 125.668 142.788 101.172 1 405.65 0 CAB HEM 201 B 1 
HETATM 21 C CBB HEM . . . E 4 125.297 143.731 100.331 1 405.65 0 CBB HEM 201 B 1 
HETATM 22 C C1C HEM . . . E 4 128.52 145.451 103.362 1 405.65 0 C1C HEM 201 B 1 
HETATM 23 C C2C HEM . . . E 4 129.39 146.407 102.692 1 405.65 0 C2C HEM 201 B 1 
HETATM 24 C C3C HEM . . . E 4 130.072 147.06 103.672 1 405.65 0 C3C HEM 201 B 1 
HETATM 25 C C4C HEM . . . E 4 129.608 146.493 104.934 1 405.65 0 C4C HEM 201 B 1 
HETATM 26 C CMC HEM . . . E 4 129.47 146.587 101.2 1 405.65 0 CMC HEM 201 B 1 
HETATM 27 C CAC HEM . . . E 4 131.082 148.142 103.559 1 405.65 0 CAC HEM 201 B 1 
HETATM 28 C CBC HEM . . . E 4 132.229 148.326 104.219 1 405.65 0 CBC HEM 201 B 1 
HETATM 29 C C1D HEM . . . E 4 129.659 146.364 107.421 1 405.65 0 C1D HEM 201 B 1 
HETATM 30 C C2D HEM . . . E 4 130.179 146.818 108.683 1 405.65 0 C2D HEM 201 B 1 
HETATM 31 C C3D HEM . . . E 4 129.535 146.07 109.628 1 405.65 0 C3D HEM 201 B 1 
HETATM 32 C C4D HEM . . . E 4 128.622 145.177 108.932 1 405.65 0 C4D HEM 201 B 1 
HETATM 33 C CMD HEM . . . E 4 131.215 147.882 108.867 1 405.65 0 CMD HEM 201 B 1 
HETATM 34 C CAD HEM . . . E 4 129.721 146.167 111.085 1 405.65 0 CAD HEM 201 B 1 
HETATM 35 C CBD HEM . . . E 4 130.879 145.155 111.33 1 405.65 0 CBD HEM 201 B 1 
HETATM 36 C CGD HEM . . . E 4 131.485 145.338 112.648 1 405.65 0 CGD HEM 201 B 1 
HETATM 37 O O1D HEM . . . E 4 130.752 145.175 113.668 1 405.65 0 O1D HEM 201 B 1 
HETATM 38 O O2D HEM . . . E 4 132.683 145.752 112.643 1 405.65 0 O2D HEM 201 B 1 
HETATM 39 N NA HEM . . . E 4 126.693 143.382 107.535 1 405.65 0 NA HEM 201 B 1 
HETATM 40 N NB HEM . . . E 4 126.622 143.492 104.686 1 405.65 0 NB HEM 201 B 1 
HETATM 41 N NC HEM . . . E 4 128.692 145.546 104.698 1 405.65 0 NC HEM 201 B 1 
HETATM 42 N ND HEM . . . E 4 128.727 145.382 107.612 1 405.65 0 ND HEM 201 B 1 
HETATM 43 FE FE HEM . . . E 4 127.738 144.454 106.155 1 405.65 0 FE HEM 201 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           277 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           43 
#