data_7PCI # _model_server_result.job_id kD_oNX7JI4zEjLyYacroxw _model_server_result.datetime_utc '2024-11-25 13:19:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7pci # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":805}' # _entry.id 7PCI # _exptl.entry_id 7PCI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7PCI _cell.length_a 75.67 _cell.length_b 84.47 _cell.length_c 46.2 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PCI _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 0 -84.47 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 196 A ASP 191 1_555 C MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.925 ? metalc ? metalc2 A OD2 ASP 196 A ASP 191 1_555 D MG MG . A MG 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.932 ? metalc ? metalc3 A OE2 GLU 200 A GLU 195 1_555 D MG MG . A MG 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc4 C MG MG . A MG 802 1_555 E O7 74I . A 74I 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc5 C MG MG . A MG 802 1_555 E O6 74I . A 74I 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc6 C MG MG . A MG 802 1_555 G O HOH . A HOH 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc7 C MG MG . A MG 802 1_555 G O HOH . A HOH 926 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? metalc ? metalc8 C MG MG . A MG 802 1_555 G O HOH . A HOH 962 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc9 D MG MG . A MG 803 1_555 E O2 74I . A 74I 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc10 D MG MG . A MG 803 1_555 E O6 74I . A 74I 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? metalc ? metalc11 D MG MG . A MG 803 1_555 G O HOH . A HOH 935 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.939 ? metalc ? metalc12 D MG MG . A MG 803 1_555 G O HOH . A HOH 938 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 183 n y N1 C5 IMD sing 184 n y N1 HN1 IMD sing 185 n n C2 N3 IMD doub 186 n y C2 H2 IMD sing 187 n n N3 C4 IMD sing 188 n y N3 HN3 IMD sing 189 n n C4 C5 IMD doub 190 n y C4 H4 IMD sing 191 n n C5 H5 IMD sing 192 n n # _atom_sites.entry_id 7PCI _atom_sites.fract_transf_matrix[1][1] 0.013215 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011839 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021645 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAD A 1 801 801 NAD NAD . C 3 MG A 1 802 802 MG MG . D 3 MG A 1 803 803 MG MG . E 4 74I A 1 804 804 74I LIG . F 5 IMD A 1 805 1 IMD IMD . G 6 HOH A 1 901 59 HOH HOH . G 6 HOH A 2 902 25 HOH HOH . G 6 HOH A 3 903 29 HOH HOH . G 6 HOH A 4 904 28 HOH HOH . G 6 HOH A 5 905 32 HOH HOH . G 6 HOH A 6 906 13 HOH HOH . G 6 HOH A 7 907 63 HOH HOH . G 6 HOH A 8 908 60 HOH HOH . G 6 HOH A 9 909 15 HOH HOH . G 6 HOH A 10 910 4 HOH HOH . G 6 HOH A 11 911 57 HOH HOH . G 6 HOH A 12 912 27 HOH HOH . G 6 HOH A 13 913 3 HOH HOH . G 6 HOH A 14 914 19 HOH HOH . G 6 HOH A 15 915 2 HOH HOH . G 6 HOH A 16 916 17 HOH HOH . G 6 HOH A 17 917 34 HOH HOH . G 6 HOH A 18 918 44 HOH HOH . G 6 HOH A 19 919 33 HOH HOH . G 6 HOH A 20 920 43 HOH HOH . G 6 HOH A 21 921 37 HOH HOH . G 6 HOH A 22 922 31 HOH HOH . G 6 HOH A 23 923 18 HOH HOH . G 6 HOH A 24 924 36 HOH HOH . G 6 HOH A 25 925 55 HOH HOH . G 6 HOH A 26 926 16 HOH HOH . G 6 HOH A 27 927 9 HOH HOH . G 6 HOH A 28 928 12 HOH HOH . G 6 HOH A 29 929 21 HOH HOH . G 6 HOH A 30 930 50 HOH HOH . G 6 HOH A 31 931 38 HOH HOH . G 6 HOH A 32 932 52 HOH HOH . G 6 HOH A 33 933 11 HOH HOH . G 6 HOH A 34 934 10 HOH HOH . G 6 HOH A 35 935 64 HOH HOH . G 6 HOH A 36 936 56 HOH HOH . G 6 HOH A 37 937 49 HOH HOH . G 6 HOH A 38 938 61 HOH HOH . G 6 HOH A 39 939 47 HOH HOH . G 6 HOH A 40 940 66 HOH HOH . G 6 HOH A 41 941 51 HOH HOH . G 6 HOH A 42 942 22 HOH HOH . G 6 HOH A 43 943 5 HOH HOH . G 6 HOH A 44 944 42 HOH HOH . G 6 HOH A 45 945 6 HOH HOH . G 6 HOH A 46 946 7 HOH HOH . G 6 HOH A 47 947 24 HOH HOH . G 6 HOH A 48 948 14 HOH HOH . G 6 HOH A 49 949 40 HOH HOH . G 6 HOH A 50 950 35 HOH HOH . G 6 HOH A 51 951 41 HOH HOH . G 6 HOH A 52 952 39 HOH HOH . G 6 HOH A 53 953 8 HOH HOH . G 6 HOH A 54 954 62 HOH HOH . G 6 HOH A 55 955 23 HOH HOH . G 6 HOH A 56 956 26 HOH HOH . G 6 HOH A 57 957 20 HOH HOH . G 6 HOH A 58 958 46 HOH HOH . G 6 HOH A 59 959 58 HOH HOH . G 6 HOH A 60 960 48 HOH HOH . G 6 HOH A 61 961 54 HOH HOH . G 6 HOH A 62 962 65 HOH HOH . G 6 HOH A 63 963 45 HOH HOH . G 6 HOH A 64 965 53 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . F 5 1.636 -31.376 8.877 1 40.25 ? N1 IMD 805 A 1 HETATM 2 C C2 IMD . . . F 5 1.328 -30.109 9.161 1 41.07 ? C2 IMD 805 A 1 HETATM 3 N N3 IMD . . . F 5 0.211 -30.116 9.859 1 43.62 ? N3 IMD 805 A 1 HETATM 4 C C4 IMD . . . F 5 -0.345 -31.36 9.777 1 43.86 ? C4 IMD 805 A 1 HETATM 5 C C5 IMD . . . F 5 0.555 -32.156 9.176 1 42.8 ? C5 IMD 805 A 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 25 _model_server_stats.element_count 5 #