data_7PCQ
#
_model_server_result.job_id            4CyIKAWPIymv6MOw3cbJLA 
_model_server_result.datetime_utc      '2024-12-18 03:48:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7pcq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":201}' 
#
_entry.id    7PCQ 
#
_exptl.entry_id    7PCQ 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 G N N 
? 4 H N N 
? 4 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 87 A HIS 87 1_555 F FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? 
metalc ? metalc2 B NE2 HIS 92 B HIS 92 1_555 G FE HEM . B HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? 
metalc ? metalc3 C NE2 HIS 87 C HIS 87 1_555 H FE HEM . C HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? 
metalc ? metalc4 D NE2 HIS 92 D HIS 92 1_555 I FE HEM . D HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 129 n n 
CHA C4D HEM doub 130 n n 
CHA HHA HEM sing 131 n n 
CHB C4A HEM sing 132 n n 
CHB C1B HEM doub 133 n n 
CHB HHB HEM sing 134 n n 
CHC C4B HEM sing 135 n n 
CHC C1C HEM doub 136 n n 
CHC HHC HEM sing 137 n n 
CHD C4C HEM doub 138 n n 
CHD C1D HEM sing 139 n n 
CHD HHD HEM sing 140 n n 
C1A C2A HEM doub 141 n y 
C1A NA HEM sing 142 n y 
C2A C3A HEM sing 143 n y 
C2A CAA HEM sing 144 n n 
C3A C4A HEM doub 145 n y 
C3A CMA HEM sing 146 n n 
C4A NA HEM sing 147 n y 
CMA HMA HEM sing 148 n n 
CMA HMAA HEM sing 149 n n 
CMA HMAB HEM sing 150 n n 
CAA CBA HEM sing 151 n n 
CAA HAA HEM sing 152 n n 
CAA HAAA HEM sing 153 n n 
CBA CGA HEM sing 154 n n 
CBA HBA HEM sing 155 n n 
CBA HBAA HEM sing 156 n n 
CGA O1A HEM doub 157 n n 
CGA O2A HEM sing 158 n n 
C1B C2B HEM sing 159 n n 
C1B NB HEM sing 160 n n 
C2B C3B HEM doub 161 n n 
C2B CMB HEM sing 162 n n 
C3B C4B HEM sing 163 n n 
C3B CAB HEM sing 164 n n 
C4B NB HEM doub 165 n n 
CMB HMB HEM sing 166 n n 
CMB HMBA HEM sing 167 n n 
CMB HMBB HEM sing 168 n n 
CAB CBB HEM doub 169 n n 
CAB HAB HEM sing 170 n n 
CBB HBB HEM sing 171 n n 
CBB HBBA HEM sing 172 n n 
C1C C2C HEM sing 173 n y 
C1C NC HEM sing 174 n y 
C2C C3C HEM doub 175 n y 
C2C CMC HEM sing 176 n n 
C3C C4C HEM sing 177 n y 
C3C CAC HEM sing 178 n n 
C4C NC HEM sing 179 n y 
CMC HMC HEM sing 180 n n 
CMC HMCA HEM sing 181 n n 
CMC HMCB HEM sing 182 n n 
CAC CBC HEM doub 183 n n 
CAC HAC HEM sing 184 n n 
CBC HBC HEM sing 185 n n 
CBC HBCA HEM sing 186 n n 
C1D C2D HEM sing 187 n n 
C1D ND HEM doub 188 n n 
C2D C3D HEM doub 189 n n 
C2D CMD HEM sing 190 n n 
C3D C4D HEM sing 191 n n 
C3D CAD HEM sing 192 n n 
C4D ND HEM sing 193 n n 
CMD HMD HEM sing 194 n n 
CMD HMDA HEM sing 195 n n 
CMD HMDB HEM sing 196 n n 
CAD CBD HEM sing 197 n n 
CAD HAD HEM sing 198 n n 
CAD HADA HEM sing 199 n n 
CBD CGD HEM sing 200 n n 
CBD HBD HEM sing 201 n n 
CBD HBDA HEM sing 202 n n 
CGD O1D HEM doub 203 n n 
CGD O2D HEM sing 204 n n 
O2A H2A HEM sing 205 n n 
O2D H2D HEM sing 206 n n 
FE NA HEM sing 207 n n 
FE NB HEM sing 208 n n 
FE NC HEM sing 209 n n 
FE ND HEM sing 210 n n 
#
_atom_sites.entry_id                     7PCQ 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 4 HEM A 1 201 1 HEM HEM . 
G 4 HEM B 1 201 1 HEM HEM . 
H 4 HEM C 1 201 1 HEM HEM . 
I 4 HEM D 1 201 1 HEM HEM . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . I 4 108.641 106.712 94.969 1 97.83 0 CHA HEM 201 D 1 
HETATM 2 C CHB HEM . . . I 4 106.719 110.687 96.856 1 97.83 0 CHB HEM 201 D 1 
HETATM 3 C CHC HEM . . . I 4 111.129 112.45 97.538 1 97.83 0 CHC HEM 201 D 1 
HETATM 4 C CHD HEM . . . I 4 113.029 108.567 95.513 1 97.83 0 CHD HEM 201 D 1 
HETATM 5 C C1A HEM . . . I 4 107.72 107.628 95.398 1 97.83 0 C1A HEM 201 D 1 
HETATM 6 C C2A HEM . . . I 4 106.266 107.487 95.324 1 97.83 0 C2A HEM 201 D 1 
HETATM 7 C C3A HEM . . . I 4 105.731 108.594 95.847 1 97.83 0 C3A HEM 201 D 1 
HETATM 8 C C4A HEM . . . I 4 106.851 109.439 96.256 1 97.83 0 C4A HEM 201 D 1 
HETATM 9 C CMA HEM . . . I 4 104.281 108.946 96.004 1 97.83 0 CMA HEM 201 D 1 
HETATM 10 C CAA HEM . . . I 4 105.547 106.315 94.757 1 97.83 0 CAA HEM 201 D 1 
HETATM 11 C CBA HEM . . . I 4 105.2 105.396 95.948 1 97.83 0 CBA HEM 201 D 1 
HETATM 12 C CGA HEM . . . I 4 104.513 104.081 95.701 1 97.83 0 CGA HEM 201 D 1 
HETATM 13 O O1A HEM . . . I 4 103.357 103.938 96.16 1 97.83 0 O1A HEM 201 D 1 
HETATM 14 O O2A HEM . . . I 4 105.192 103.143 95.215 1 97.83 0 O2A HEM 201 D 1 
HETATM 15 C C1B HEM . . . I 4 107.728 111.532 97.208 1 97.83 0 C1B HEM 201 D 1 
HETATM 16 C C2B HEM . . . I 4 107.545 112.845 97.777 1 97.83 0 C2B HEM 201 D 1 
HETATM 17 C C3B HEM . . . I 4 108.794 113.34 97.972 1 97.83 0 C3B HEM 201 D 1 
HETATM 18 C C4B HEM . . . I 4 109.726 112.335 97.518 1 97.83 0 C4B HEM 201 D 1 
HETATM 19 C CMB HEM . . . I 4 106.217 113.495 98.083 1 97.83 0 CMB HEM 201 D 1 
HETATM 20 C CAB HEM . . . I 4 109.21 114.655 98.526 1 97.83 0 CAB HEM 201 D 1 
HETATM 21 C CBB HEM . . . I 4 109.868 114.926 99.634 1 97.83 0 CBB HEM 201 D 1 
HETATM 22 C C1C HEM . . . I 4 112.071 111.58 97.016 1 97.83 0 C1C HEM 201 D 1 
HETATM 23 C C2C HEM . . . I 4 113.508 111.809 96.949 1 97.83 0 C2C HEM 201 D 1 
HETATM 24 C C3C HEM . . . I 4 114.05 110.695 96.375 1 97.83 0 C3C HEM 201 D 1 
HETATM 25 C C4C HEM . . . I 4 112.925 109.813 96.095 1 97.83 0 C4C HEM 201 D 1 
HETATM 26 C CMC HEM . . . I 4 114.165 113.065 97.453 1 97.83 0 CMC HEM 201 D 1 
HETATM 27 C CAC HEM . . . I 4 115.448 110.325 96.022 1 97.83 0 CAC HEM 201 D 1 
HETATM 28 C CBC HEM . . . I 4 116.62 110.862 96.377 1 97.83 0 CBC HEM 201 D 1 
HETATM 29 C C1D HEM . . . I 4 112.007 107.705 95.167 1 97.83 0 C1D HEM 201 D 1 
HETATM 30 C C2D HEM . . . I 4 112.213 106.45 94.501 1 97.83 0 C2D HEM 201 D 1 
HETATM 31 C C3D HEM . . . I 4 110.966 105.912 94.327 1 97.83 0 C3D HEM 201 D 1 
HETATM 32 C C4D HEM . . . I 4 110.015 106.85 94.914 1 97.83 0 C4D HEM 201 D 1 
HETATM 33 C CMD HEM . . . I 4 113.553 105.921 94.108 1 97.83 0 CMD HEM 201 D 1 
HETATM 34 C CAD HEM . . . I 4 110.634 104.614 93.705 1 97.83 0 CAD HEM 201 D 1 
HETATM 35 C CBD HEM . . . I 4 110.962 104.827 92.192 1 97.83 0 CBD HEM 201 D 1 
HETATM 36 C CGD HEM . . . I 4 110.421 103.767 91.344 1 97.83 0 CGD HEM 201 D 1 
HETATM 37 O O1D HEM . . . I 4 110.634 102.565 91.683 1 97.83 0 O1D HEM 201 D 1 
HETATM 38 O O2D HEM . . . I 4 109.684 104.163 90.392 1 97.83 0 O2D HEM 201 D 1 
HETATM 39 N NA HEM . . . I 4 108.032 108.822 95.969 1 97.83 0 NA HEM 201 D 1 
HETATM 40 N NB HEM . . . I 4 109.055 111.253 97.063 1 97.83 0 NB HEM 201 D 1 
HETATM 41 N NC HEM . . . I 4 111.778 110.373 96.493 1 97.83 0 NC HEM 201 D 1 
HETATM 42 N ND HEM . . . I 4 110.677 107.911 95.401 1 97.83 0 ND HEM 201 D 1 
HETATM 43 FE FE HEM . . . I 4 109.917 109.519 96.301 1 97.83 0 FE HEM 201 D 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           43 
#