data_7PCS # _model_server_result.job_id AXNM91ASMTUA_Tgi9OLyag _model_server_result.datetime_utc '2024-12-21 17:52:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7pcs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":302}' # _entry.id 7PCS # _exptl.entry_id 7PCS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7PCS _cell.length_a 68.6 _cell.length_b 68.6 _cell.length_c 191.96 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PCS _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall 'P 31' _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 L N N ? 3 M N N ? 3 N N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 7PCS _atom_sites.fract_transf_matrix[1][1] 0.014577 _atom_sites.fract_transf_matrix[1][2] 0.008416 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016832 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005209 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 GOL A 1 301 1 GOL GOL . F 3 GOL A 1 302 4 GOL GOL . G 4 NAD B 1 301 2 NAD NAD . H 3 GOL B 1 302 2 GOL GOL . I 3 GOL C 1 301 3 GOL GOL . J 3 GOL C 1 302 7 GOL GOL . K 4 NAD D 1 301 1 NAD NAD . L 3 GOL D 1 302 5 GOL GOL . M 3 GOL D 1 303 6 GOL GOL . N 3 GOL D 1 304 8 GOL GOL . O 5 HOH A 1 401 21 HOH HOH . O 5 HOH A 2 402 176 HOH HOH . O 5 HOH A 3 403 275 HOH HOH . O 5 HOH A 4 404 133 HOH HOH . O 5 HOH A 5 405 57 HOH HOH . O 5 HOH A 6 406 152 HOH HOH . O 5 HOH A 7 407 140 HOH HOH . O 5 HOH A 8 408 24 HOH HOH . O 5 HOH A 9 409 12 HOH HOH . O 5 HOH A 10 410 61 HOH HOH . O 5 HOH A 11 411 299 HOH HOH . O 5 HOH A 12 412 4 HOH HOH . O 5 HOH A 13 413 104 HOH HOH . O 5 HOH A 14 414 198 HOH HOH . O 5 HOH A 15 415 144 HOH HOH . O 5 HOH A 16 416 212 HOH HOH . O 5 HOH A 17 417 22 HOH HOH . O 5 HOH A 18 418 70 HOH HOH . O 5 HOH A 19 419 62 HOH HOH . O 5 HOH A 20 420 27 HOH HOH . O 5 HOH A 21 421 149 HOH HOH . O 5 HOH A 22 422 77 HOH HOH . O 5 HOH A 23 423 5 HOH HOH . O 5 HOH A 24 424 245 HOH HOH . O 5 HOH A 25 425 182 HOH HOH . O 5 HOH A 26 426 253 HOH HOH . O 5 HOH A 27 427 65 HOH HOH . O 5 HOH A 28 428 268 HOH HOH . O 5 HOH A 29 429 215 HOH HOH . O 5 HOH A 30 430 55 HOH HOH . O 5 HOH A 31 431 164 HOH HOH . O 5 HOH A 32 432 127 HOH HOH . O 5 HOH A 33 433 125 HOH HOH . O 5 HOH A 34 434 189 HOH HOH . O 5 HOH A 35 435 203 HOH HOH . O 5 HOH A 36 436 86 HOH HOH . O 5 HOH A 37 437 163 HOH HOH . O 5 HOH A 38 438 286 HOH HOH . O 5 HOH A 39 439 146 HOH HOH . O 5 HOH A 40 440 100 HOH HOH . O 5 HOH A 41 441 56 HOH HOH . O 5 HOH A 42 442 254 HOH HOH . O 5 HOH A 43 443 226 HOH HOH . O 5 HOH A 44 444 71 HOH HOH . O 5 HOH A 45 445 280 HOH HOH . O 5 HOH A 46 446 213 HOH HOH . O 5 HOH A 47 447 81 HOH HOH . O 5 HOH A 48 448 157 HOH HOH . O 5 HOH A 49 449 160 HOH HOH . O 5 HOH A 50 450 289 HOH HOH . O 5 HOH A 51 451 108 HOH HOH . O 5 HOH A 52 452 131 HOH HOH . O 5 HOH A 53 453 78 HOH HOH . O 5 HOH A 54 454 256 HOH HOH . O 5 HOH A 55 455 197 HOH HOH . O 5 HOH A 56 456 91 HOH HOH . O 5 HOH A 57 457 285 HOH HOH . O 5 HOH A 58 458 246 HOH HOH . O 5 HOH A 59 459 82 HOH HOH . O 5 HOH A 60 460 196 HOH HOH . O 5 HOH A 61 461 234 HOH HOH . O 5 HOH A 62 462 16 HOH HOH . O 5 HOH A 63 463 242 HOH HOH . O 5 HOH A 64 464 63 HOH HOH . O 5 HOH A 65 465 107 HOH HOH . O 5 HOH A 66 466 161 HOH HOH . O 5 HOH A 67 467 174 HOH HOH . O 5 HOH A 68 468 240 HOH HOH . O 5 HOH A 69 469 262 HOH HOH . O 5 HOH A 70 470 183 HOH HOH . O 5 HOH A 71 471 200 HOH HOH . O 5 HOH A 72 472 209 HOH HOH . O 5 HOH A 73 473 287 HOH HOH . O 5 HOH A 74 474 201 HOH HOH . O 5 HOH A 75 475 228 HOH HOH . O 5 HOH A 76 476 238 HOH HOH . O 5 HOH A 77 477 205 HOH HOH . O 5 HOH A 78 478 218 HOH HOH . O 5 HOH A 79 479 170 HOH HOH . O 5 HOH A 80 480 222 HOH HOH . O 5 HOH A 81 481 217 HOH HOH . O 5 HOH A 82 482 64 HOH HOH . O 5 HOH A 83 483 79 HOH HOH . O 5 HOH A 84 484 141 HOH HOH . O 5 HOH A 85 485 84 HOH HOH . O 5 HOH A 86 486 288 HOH HOH . P 5 HOH B 1 401 185 HOH HOH . P 5 HOH B 2 402 239 HOH HOH . P 5 HOH B 3 403 248 HOH HOH . P 5 HOH B 4 404 134 HOH HOH . P 5 HOH B 5 405 276 HOH HOH . P 5 HOH B 6 406 66 HOH HOH . P 5 HOH B 7 407 139 HOH HOH . P 5 HOH B 8 408 123 HOH HOH . P 5 HOH B 9 409 130 HOH HOH . P 5 HOH B 10 410 109 HOH HOH . P 5 HOH B 11 411 208 HOH HOH . P 5 HOH B 12 412 54 HOH HOH . P 5 HOH B 13 413 249 HOH HOH . P 5 HOH B 14 414 75 HOH HOH . P 5 HOH B 15 415 35 HOH HOH . P 5 HOH B 16 416 150 HOH HOH . P 5 HOH B 17 417 195 HOH HOH . P 5 HOH B 18 418 210 HOH HOH . P 5 HOH B 19 419 207 HOH HOH . P 5 HOH B 20 420 96 HOH HOH . P 5 HOH B 21 421 28 HOH HOH . P 5 HOH B 22 422 194 HOH HOH . P 5 HOH B 23 423 32 HOH HOH . P 5 HOH B 24 424 153 HOH HOH . P 5 HOH B 25 425 94 HOH HOH . P 5 HOH B 26 426 10 HOH HOH . P 5 HOH B 27 427 269 HOH HOH . P 5 HOH B 28 428 29 HOH HOH . P 5 HOH B 29 429 8 HOH HOH . P 5 HOH B 30 430 68 HOH HOH . P 5 HOH B 31 431 26 HOH HOH . P 5 HOH B 32 432 128 HOH HOH . P 5 HOH B 33 433 9 HOH HOH . P 5 HOH B 34 434 34 HOH HOH . P 5 HOH B 35 435 264 HOH HOH . P 5 HOH B 36 436 271 HOH HOH . P 5 HOH B 37 437 67 HOH HOH . P 5 HOH B 38 438 31 HOH HOH . P 5 HOH B 39 439 166 HOH HOH . P 5 HOH B 40 440 148 HOH HOH . P 5 HOH B 41 441 6 HOH HOH . P 5 HOH B 42 442 30 HOH HOH . P 5 HOH B 43 443 151 HOH HOH . P 5 HOH B 44 444 59 HOH HOH . P 5 HOH B 45 445 2 HOH HOH . P 5 HOH B 46 446 244 HOH HOH . P 5 HOH B 47 447 132 HOH HOH . P 5 HOH B 48 448 11 HOH HOH . P 5 HOH B 49 449 155 HOH HOH . P 5 HOH B 50 450 60 HOH HOH . P 5 HOH B 51 451 33 HOH HOH . P 5 HOH B 52 452 175 HOH HOH . P 5 HOH B 53 453 172 HOH HOH . P 5 HOH B 54 454 142 HOH HOH . P 5 HOH B 55 455 220 HOH HOH . P 5 HOH B 56 456 97 HOH HOH . P 5 HOH B 57 457 270 HOH HOH . P 5 HOH B 58 458 89 HOH HOH . P 5 HOH B 59 459 233 HOH HOH . P 5 HOH B 60 460 98 HOH HOH . P 5 HOH B 61 461 227 HOH HOH . P 5 HOH B 62 462 95 HOH HOH . P 5 HOH B 63 463 186 HOH HOH . P 5 HOH B 64 464 17 HOH HOH . P 5 HOH B 65 465 137 HOH HOH . P 5 HOH B 66 466 232 HOH HOH . P 5 HOH B 67 467 221 HOH HOH . P 5 HOH B 68 468 216 HOH HOH . P 5 HOH B 69 469 88 HOH HOH . P 5 HOH B 70 470 263 HOH HOH . P 5 HOH B 71 471 291 HOH HOH . P 5 HOH B 72 472 257 HOH HOH . P 5 HOH B 73 473 258 HOH HOH . P 5 HOH B 74 474 143 HOH HOH . P 5 HOH B 75 475 93 HOH HOH . P 5 HOH B 76 476 168 HOH HOH . P 5 HOH B 77 477 284 HOH HOH . P 5 HOH B 78 478 18 HOH HOH . P 5 HOH B 79 479 236 HOH HOH . P 5 HOH B 80 480 156 HOH HOH . Q 5 HOH C 1 401 190 HOH HOH . Q 5 HOH C 2 402 230 HOH HOH . Q 5 HOH C 3 403 118 HOH HOH . Q 5 HOH C 4 404 159 HOH HOH . Q 5 HOH C 5 405 191 HOH HOH . Q 5 HOH C 6 406 138 HOH HOH . Q 5 HOH C 7 407 261 HOH HOH . Q 5 HOH C 8 408 101 HOH HOH . Q 5 HOH C 9 409 74 HOH HOH . Q 5 HOH C 10 410 37 HOH HOH . Q 5 HOH C 11 411 171 HOH HOH . Q 5 HOH C 12 412 114 HOH HOH . Q 5 HOH C 13 413 1 HOH HOH . Q 5 HOH C 14 414 51 HOH HOH . Q 5 HOH C 15 415 273 HOH HOH . Q 5 HOH C 16 416 250 HOH HOH . Q 5 HOH C 17 417 38 HOH HOH . Q 5 HOH C 18 418 120 HOH HOH . Q 5 HOH C 19 419 259 HOH HOH . Q 5 HOH C 20 420 53 HOH HOH . Q 5 HOH C 21 421 136 HOH HOH . Q 5 HOH C 22 422 225 HOH HOH . Q 5 HOH C 23 423 214 HOH HOH . Q 5 HOH C 24 424 25 HOH HOH . Q 5 HOH C 25 425 73 HOH HOH . Q 5 HOH C 26 426 145 HOH HOH . Q 5 HOH C 27 427 178 HOH HOH . Q 5 HOH C 28 428 199 HOH HOH . Q 5 HOH C 29 429 279 HOH HOH . Q 5 HOH C 30 430 58 HOH HOH . Q 5 HOH C 31 431 85 HOH HOH . Q 5 HOH C 32 432 165 HOH HOH . Q 5 HOH C 33 433 112 HOH HOH . Q 5 HOH C 34 434 282 HOH HOH . Q 5 HOH C 35 435 76 HOH HOH . Q 5 HOH C 36 436 193 HOH HOH . Q 5 HOH C 37 437 103 HOH HOH . Q 5 HOH C 38 438 36 HOH HOH . Q 5 HOH C 39 439 80 HOH HOH . Q 5 HOH C 40 440 119 HOH HOH . Q 5 HOH C 41 441 7 HOH HOH . Q 5 HOH C 42 442 255 HOH HOH . Q 5 HOH C 43 443 251 HOH HOH . Q 5 HOH C 44 444 111 HOH HOH . Q 5 HOH C 45 445 206 HOH HOH . Q 5 HOH C 46 446 115 HOH HOH . Q 5 HOH C 47 447 87 HOH HOH . Q 5 HOH C 48 448 169 HOH HOH . Q 5 HOH C 49 449 202 HOH HOH . Q 5 HOH C 50 450 99 HOH HOH . Q 5 HOH C 51 451 83 HOH HOH . Q 5 HOH C 52 452 116 HOH HOH . Q 5 HOH C 53 453 179 HOH HOH . Q 5 HOH C 54 454 23 HOH HOH . Q 5 HOH C 55 455 229 HOH HOH . Q 5 HOH C 56 456 252 HOH HOH . Q 5 HOH C 57 457 243 HOH HOH . Q 5 HOH C 58 458 117 HOH HOH . Q 5 HOH C 59 459 296 HOH HOH . Q 5 HOH C 60 460 223 HOH HOH . Q 5 HOH C 61 461 290 HOH HOH . Q 5 HOH C 62 462 292 HOH HOH . Q 5 HOH C 63 463 180 HOH HOH . Q 5 HOH C 64 464 173 HOH HOH . Q 5 HOH C 65 465 224 HOH HOH . Q 5 HOH C 66 466 72 HOH HOH . Q 5 HOH C 67 467 272 HOH HOH . Q 5 HOH C 68 468 241 HOH HOH . R 5 HOH D 1 401 188 HOH HOH . R 5 HOH D 2 402 90 HOH HOH . R 5 HOH D 3 403 162 HOH HOH . R 5 HOH D 4 404 129 HOH HOH . R 5 HOH D 5 405 293 HOH HOH . R 5 HOH D 6 406 219 HOH HOH . R 5 HOH D 7 407 154 HOH HOH . R 5 HOH D 8 408 277 HOH HOH . R 5 HOH D 9 409 278 HOH HOH . R 5 HOH D 10 410 102 HOH HOH . R 5 HOH D 11 411 106 HOH HOH . R 5 HOH D 12 412 20 HOH HOH . R 5 HOH D 13 413 40 HOH HOH . R 5 HOH D 14 414 15 HOH HOH . R 5 HOH D 15 415 247 HOH HOH . R 5 HOH D 16 416 122 HOH HOH . R 5 HOH D 17 417 121 HOH HOH . R 5 HOH D 18 418 266 HOH HOH . R 5 HOH D 19 419 44 HOH HOH . R 5 HOH D 20 420 41 HOH HOH . R 5 HOH D 21 421 42 HOH HOH . R 5 HOH D 22 422 47 HOH HOH . R 5 HOH D 23 423 52 HOH HOH . R 5 HOH D 24 424 48 HOH HOH . R 5 HOH D 25 425 267 HOH HOH . R 5 HOH D 26 426 211 HOH HOH . R 5 HOH D 27 427 237 HOH HOH . R 5 HOH D 28 428 158 HOH HOH . R 5 HOH D 29 429 126 HOH HOH . R 5 HOH D 30 430 14 HOH HOH . R 5 HOH D 31 431 13 HOH HOH . R 5 HOH D 32 432 46 HOH HOH . R 5 HOH D 33 433 39 HOH HOH . R 5 HOH D 34 434 50 HOH HOH . R 5 HOH D 35 435 167 HOH HOH . R 5 HOH D 36 436 124 HOH HOH . R 5 HOH D 37 437 69 HOH HOH . R 5 HOH D 38 438 105 HOH HOH . R 5 HOH D 39 439 92 HOH HOH . R 5 HOH D 40 440 49 HOH HOH . R 5 HOH D 41 441 19 HOH HOH . R 5 HOH D 42 442 43 HOH HOH . R 5 HOH D 43 443 298 HOH HOH . R 5 HOH D 44 444 135 HOH HOH . R 5 HOH D 45 445 3 HOH HOH . R 5 HOH D 46 446 147 HOH HOH . R 5 HOH D 47 447 184 HOH HOH . R 5 HOH D 48 448 110 HOH HOH . R 5 HOH D 49 449 192 HOH HOH . R 5 HOH D 50 450 265 HOH HOH . R 5 HOH D 51 451 45 HOH HOH . R 5 HOH D 52 452 177 HOH HOH . R 5 HOH D 53 453 113 HOH HOH . R 5 HOH D 54 454 231 HOH HOH . R 5 HOH D 55 455 294 HOH HOH . R 5 HOH D 56 456 260 HOH HOH . R 5 HOH D 57 457 204 HOH HOH . R 5 HOH D 58 458 187 HOH HOH . R 5 HOH D 59 459 235 HOH HOH . R 5 HOH D 60 460 297 HOH HOH . R 5 HOH D 61 461 295 HOH HOH . R 5 HOH D 62 462 283 HOH HOH . R 5 HOH D 63 463 281 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . L 3 -9.287 -21.843 27.94 1 66.09 ? C1 GOL 302 D 1 HETATM 2 O O1 GOL . . . L 3 -7.933 -22.226 28.036 1 65.29 ? O1 GOL 302 D 1 HETATM 3 C C2 GOL . . . L 3 -9.301 -20.319 27.718 1 59.34 ? C2 GOL 302 D 1 HETATM 4 O O2 GOL . . . L 3 -10.313 -19.694 28.424 1 55.62 ? O2 GOL 302 D 1 HETATM 5 C C3 GOL . . . L 3 -9.456 -20.158 26.209 1 61.15 ? C3 GOL 302 D 1 HETATM 6 O O3 GOL . . . L 3 -9.98 -18.86 25.995 1 58.89 ? O3 GOL 302 D 1 HETATM 7 H H31 GOL . . . L 3 -8.595 -20.302 25.785 1 73.48 ? H31 GOL 302 D 1 HETATM 8 H H32 GOL . . . L 3 -10.028 -20.866 25.873 1 73.48 ? H32 GOL 302 D 1 HETATM 9 H HO3 GOL . . . L 3 -10.581 -18.732 26.589 1 70.77 ? HO3 GOL 302 D 1 # _model_server_stats.io_time_ms 125 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 57 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 9 #