data_7PE6
#
_model_server_result.job_id            XShNb2gEULAIH-4K7O5XWg 
_model_server_result.datetime_utc      '2024-10-18 16:21:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7pe6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":301}' 
#
_entry.id    7PE6 
#
_exptl.entry_id    7PE6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              315.678 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (~{N}~{E})-~{N}-[1-[(6-chloranylpyridin-3-yl)methyl]pyridin-2-ylidene]-2,2,2-tris(fluoranyl)ethanamide 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7PE6 
_cell.length_a            74.04 
_cell.length_b            74.04 
_cell.length_c            350.59 
_cell.Z_PDB               30 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7PE6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 123 AaA CYS 123 1_555 A SG CYS 136 AaA CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? 
disulf ? disulf2 A SG CYS 187 AaA CYS 187 1_555 A SG CYS 188 AaA CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.585 ? 
disulf ? disulf3 B SG CYS 123 BaB CYS 123 1_555 B SG CYS 136 BaB CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? 
disulf ? disulf4 B SG CYS 187 BaB CYS 187 1_555 B SG CYS 188 BaB CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? 
disulf ? disulf5 C SG CYS 123 CaC CYS 123 1_555 C SG CYS 136 CaC CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? 
disulf ? disulf6 C SG CYS 187 CaC CYS 187 1_555 C SG CYS 188 CaC CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? 
disulf ? disulf7 D SG CYS 123 DaD CYS 123 1_555 D SG CYS 136 DaD CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? 
disulf ? disulf8 D SG CYS 187 DaD CYS 187 1_555 D SG CYS 188 DaD CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? 
disulf ? disulf9 E SG CYS 123 EaE CYS 123 1_555 E SG CYS 136 EaE CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? 
disulf ? disulf10 E SG CYS 187 EaE CYS 187 1_555 E SG CYS 188 EaE CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? 
#
_chem_comp.formula           'C13 H9 Cl F3 N3 O' 
_chem_comp.formula_weight    315.678 
_chem_comp.id                7OF 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (~{N}~{E})-~{N}-[1-[(6-chloranylpyridin-3-yl)methyl]pyridin-2-ylidene]-2,2,2-tris(fluoranyl)ethanamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CL1 C8 7OF sing 1 n n 
C8 C7 7OF doub 2 n y 
C8 N3 7OF sing 3 n y 
C7 C6 7OF sing 4 n y 
N3 C9 7OF doub 5 n y 
C6 C5 7OF doub 6 n y 
F1 C2 7OF sing 7 n n 
F3 C2 7OF sing 8 n n 
C9 C5 7OF sing 9 n y 
C5 C4 7OF sing 10 n n 
C2 F2 7OF sing 11 n n 
C2 C1 7OF sing 12 n n 
C4 N2 7OF sing 13 n n 
C1 N1 7OF sing 14 n n 
C1 O1 7OF doub 15 n n 
N1 C3 7OF doub 16 n n 
N2 C3 7OF sing 17 n n 
N2 C10 7OF sing 18 n n 
C3 C13 7OF sing 19 n n 
C10 C11 7OF doub 20 n n 
C13 C12 7OF doub 21 n n 
C11 C12 7OF sing 22 n n 
C4 H1 7OF sing 23 n n 
C4 H2 7OF sing 24 n n 
C6 H3 7OF sing 25 n n 
C9 H4 7OF sing 26 n n 
C10 H5 7OF sing 27 n n 
C11 H6 7OF sing 28 n n 
C12 H7 7OF sing 29 n n 
C13 H8 7OF sing 30 n n 
C7 H9 7OF sing 31 n n 
#
_atom_sites.entry_id                     7PE6 
_atom_sites.fract_transf_matrix[1][1]    0.013506 
_atom_sites.fract_transf_matrix[1][2]    0.007798 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015596 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002852 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 2 7OF AaA 1 301 0 7OF 842 . 
G 2 7OF BaB 1 301 0 7OF 842 . 
H 2 7OF CaC 1 301 0 7OF 842 . 
I 2 7OF DaD 1 301 0 7OF 842 . 
J 2 7OF EaE 1 301 0 7OF 842 . 
K 3 HOH AaA 1 401 8 HOH HOH . 
K 3 HOH AaA 2 402 112 HOH HOH . 
K 3 HOH AaA 3 403 2 HOH HOH . 
K 3 HOH AaA 4 404 16 HOH HOH . 
K 3 HOH AaA 5 405 3 HOH HOH . 
K 3 HOH AaA 6 406 78 HOH HOH . 
K 3 HOH AaA 7 407 74 HOH HOH . 
K 3 HOH AaA 8 408 15 HOH HOH . 
K 3 HOH AaA 9 409 76 HOH HOH . 
K 3 HOH AaA 10 410 4 HOH HOH . 
K 3 HOH AaA 11 411 21 HOH HOH . 
K 3 HOH AaA 12 412 102 HOH HOH . 
K 3 HOH AaA 13 413 12 HOH HOH . 
K 3 HOH AaA 14 414 17 HOH HOH . 
K 3 HOH AaA 15 415 81 HOH HOH . 
K 3 HOH AaA 16 416 95 HOH HOH . 
K 3 HOH AaA 17 417 9 HOH HOH . 
K 3 HOH AaA 18 418 101 HOH HOH . 
K 3 HOH AaA 19 419 73 HOH HOH . 
K 3 HOH AaA 20 420 103 HOH HOH . 
K 3 HOH AaA 21 421 100 HOH HOH . 
K 3 HOH AaA 22 422 77 HOH HOH . 
K 3 HOH AaA 23 423 6 HOH HOH . 
K 3 HOH AaA 24 424 5 HOH HOH . 
K 3 HOH AaA 25 425 108 HOH HOH . 
K 3 HOH AaA 26 426 75 HOH HOH . 
K 3 HOH AaA 27 427 13 HOH HOH . 
K 3 HOH AaA 28 428 7 HOH HOH . 
K 3 HOH AaA 29 429 80 HOH HOH . 
L 3 HOH BaB 1 401 84 HOH HOH . 
L 3 HOH BaB 2 402 33 HOH HOH . 
L 3 HOH BaB 3 403 25 HOH HOH . 
L 3 HOH BaB 4 404 23 HOH HOH . 
L 3 HOH BaB 5 405 26 HOH HOH . 
L 3 HOH BaB 6 406 31 HOH HOH . 
L 3 HOH BaB 7 407 86 HOH HOH . 
L 3 HOH BaB 8 408 22 HOH HOH . 
L 3 HOH BaB 9 409 30 HOH HOH . 
L 3 HOH BaB 10 410 27 HOH HOH . 
L 3 HOH BaB 11 411 72 HOH HOH . 
L 3 HOH BaB 12 412 32 HOH HOH . 
L 3 HOH BaB 13 413 85 HOH HOH . 
L 3 HOH BaB 14 414 28 HOH HOH . 
L 3 HOH BaB 15 415 24 HOH HOH . 
L 3 HOH BaB 16 416 29 HOH HOH . 
L 3 HOH BaB 17 417 104 HOH HOH . 
M 3 HOH CaC 1 401 38 HOH HOH . 
M 3 HOH CaC 2 402 41 HOH HOH . 
M 3 HOH CaC 3 403 43 HOH HOH . 
M 3 HOH CaC 4 404 87 HOH HOH . 
M 3 HOH CaC 5 405 44 HOH HOH . 
M 3 HOH CaC 6 406 45 HOH HOH . 
M 3 HOH CaC 7 407 39 HOH HOH . 
M 3 HOH CaC 8 408 37 HOH HOH . 
M 3 HOH CaC 9 409 42 HOH HOH . 
N 3 HOH DaD 1 401 53 HOH HOH . 
N 3 HOH DaD 2 402 88 HOH HOH . 
N 3 HOH DaD 3 403 46 HOH HOH . 
N 3 HOH DaD 4 404 40 HOH HOH . 
N 3 HOH DaD 5 405 50 HOH HOH . 
N 3 HOH DaD 6 406 49 HOH HOH . 
N 3 HOH DaD 7 407 48 HOH HOH . 
N 3 HOH DaD 8 408 105 HOH HOH . 
N 3 HOH DaD 9 409 89 HOH HOH . 
N 3 HOH DaD 10 410 71 HOH HOH . 
N 3 HOH DaD 11 411 113 HOH HOH . 
N 3 HOH DaD 12 412 62 HOH HOH . 
N 3 HOH DaD 13 413 36 HOH HOH . 
N 3 HOH DaD 14 414 106 HOH HOH . 
N 3 HOH DaD 15 415 55 HOH HOH . 
N 3 HOH DaD 16 416 47 HOH HOH . 
N 3 HOH DaD 17 417 14 HOH HOH . 
N 3 HOH DaD 18 418 35 HOH HOH . 
N 3 HOH DaD 19 419 56 HOH HOH . 
N 3 HOH DaD 20 420 52 HOH HOH . 
N 3 HOH DaD 21 421 51 HOH HOH . 
O 3 HOH EaE 1 401 79 HOH HOH . 
O 3 HOH EaE 2 402 94 HOH HOH . 
O 3 HOH EaE 3 403 91 HOH HOH . 
O 3 HOH EaE 4 404 20 HOH HOH . 
O 3 HOH EaE 5 405 60 HOH HOH . 
O 3 HOH EaE 6 406 65 HOH HOH . 
O 3 HOH EaE 7 407 96 HOH HOH . 
O 3 HOH EaE 8 408 67 HOH HOH . 
O 3 HOH EaE 9 409 69 HOH HOH . 
O 3 HOH EaE 10 410 110 HOH HOH . 
O 3 HOH EaE 11 411 83 HOH HOH . 
O 3 HOH EaE 12 412 90 HOH HOH . 
O 3 HOH EaE 13 413 92 HOH HOH . 
O 3 HOH EaE 14 414 66 HOH HOH . 
O 3 HOH EaE 15 415 64 HOH HOH . 
O 3 HOH EaE 16 416 111 HOH HOH . 
O 3 HOH EaE 17 417 93 HOH HOH . 
O 3 HOH EaE 18 418 70 HOH HOH . 
O 3 HOH EaE 19 419 11 HOH HOH . 
O 3 HOH EaE 20 420 61 HOH HOH . 
O 3 HOH EaE 21 421 19 HOH HOH . 
O 3 HOH EaE 22 422 59 HOH HOH . 
O 3 HOH EaE 23 423 63 HOH HOH . 
O 3 HOH EaE 24 424 1 HOH HOH . 
O 3 HOH EaE 25 425 18 HOH HOH . 
O 3 HOH EaE 26 426 58 HOH HOH . 
O 3 HOH EaE 27 427 54 HOH HOH . 
O 3 HOH EaE 28 428 109 HOH HOH . 
O 3 HOH EaE 29 429 107 HOH HOH . 
O 3 HOH EaE 30 430 10 HOH HOH . 
O 3 HOH EaE 31 431 68 HOH HOH . 
O 3 HOH EaE 32 432 97 HOH HOH . 
O 3 HOH EaE 33 433 98 HOH HOH . 
O 3 HOH EaE 34 434 99 HOH HOH . 
O 3 HOH EaE 35 435 82 HOH HOH . 
O 3 HOH EaE 36 436 57 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 7OF . . . H 2 24.165 24.972 -8.167 1 84.99 ? C1 7OF 301 CaC 1 
HETATM 2 C C2 7OF . . . H 2 23.598 25.418 -9.547 1 91.55 ? C2 7OF 301 CaC 1 
HETATM 3 N N3 7OF . . . H 2 25.771 19.67 -9.206 1 53.38 ? N3 7OF 301 CaC 1 
HETATM 4 C C4 7OF . . . H 2 22.716 21.318 -7.707 1 64.35 ? C4 7OF 301 CaC 1 
HETATM 5 C C5 7OF . . . H 2 23.845 21.026 -8.682 1 59.8 ? C5 7OF 301 CaC 1 
HETATM 6 C C6 7OF . . . H 2 24.073 21.791 -9.831 1 58.77 ? C6 7OF 301 CaC 1 
HETATM 7 C C8 7OF . . . H 2 25.946 20.427 -10.293 1 52.46 ? C8 7OF 301 CaC 1 
HETATM 8 C C9 7OF . . . H 2 24.743 19.985 -8.413 1 57.36 ? C9 7OF 301 CaC 1 
HETATM 9 C C10 7OF . . . H 2 23.254 21.281 -5.338 1 66.56 ? C10 7OF 301 CaC 1 
HETATM 10 C C11 7OF . . . H 2 23.755 21.801 -4.2 1 68.68 ? C11 7OF 301 CaC 1 
HETATM 11 C C12 7OF . . . H 2 24.264 23.124 -4.241 1 72.18 ? C12 7OF 301 CaC 1 
HETATM 12 C C13 7OF . . . H 2 24.237 23.824 -5.414 1 69.62 ? C13 7OF 301 CaC 1 
HETATM 13 CL CL1 7OF . . . H 2 27.286 19.975 -11.305 1 55.71 ? CL1 7OF 301 CaC 1 
HETATM 14 C C7 7OF . . . H 2 25.135 21.482 -10.653 1 57.41 ? C7 7OF 301 CaC 1 
HETATM 15 N N2 7OF . . . H 2 23.217 21.968 -6.502 1 65.48 ? N2 7OF 301 CaC 1 
HETATM 16 C C3 7OF . . . H 2 23.732 23.273 -6.589 1 71.14 ? C3 7OF 301 CaC 1 
HETATM 17 N N1 7OF . . . H 2 23.614 23.793 -7.835 1 77.53 ? N1 7OF 301 CaC 1 
HETATM 18 O O1 7OF . . . H 2 25.001 25.692 -7.6 1 82.87 ? O1 7OF 301 CaC 1 
HETATM 19 F F1 7OF . . . H 2 23.455 24.467 -10.431 1 89.51 ? F1 7OF 301 CaC 1 
HETATM 20 F F2 7OF . . . H 2 22.378 25.984 -9.408 1 98.25 ? F2 7OF 301 CaC 1 
HETATM 21 F F3 7OF . . . H 2 24.385 26.365 -10.097 1 94.6 ? F3 7OF 301 CaC 1 
#
_model_server_stats.io_time_ms              74 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           253 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           21 
#