data_7PE9 # _model_server_result.job_id Qi7Nw3dZu6AtC_TmQYLLNQ _model_server_result.datetime_utc '2024-12-27 02:23:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7pe9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":2601}' # _entry.id 7PE9 # _exptl.entry_id 7PE9 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 660.035 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'INOSITOL HEXAKISPHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7PE9 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PE9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 D N ALA 2 G ALA 2 1_555 H C ACE . G ACE 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.429 ? covale ? covale2 D N ALA 2 G ALA 2 1_555 H O ACE . G ACE 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.412 ? metalc ? metalc1 C NE2 HIS 1515 E HIS 1515 1_555 G ZN ZN . E ZN 4801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? metalc ? metalc2 C SG CYS 1520 E CYS 1520 1_555 G ZN ZN . E ZN 4801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc3 C SG CYS 1523 E CYS 1523 1_555 G ZN ZN . E ZN 4801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc4 C SG CYS 1651 E CYS 1651 1_555 G ZN ZN . E ZN 4801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? # _chem_comp.formula 'C6 H18 O24 P6' _chem_comp.formula_weight 660.035 _chem_comp.id IHP _chem_comp.mon_nstd_flag . _chem_comp.name 'INOSITOL HEXAKISPHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'MYO-INOSITOL HEXAKISPHOSPHATE;INOSITOL 1,2,3,4,5,6-HEXAKISPHOSPHATE' # _atom_sites.entry_id 7PE9 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 IHP A 1 2601 2601 IHP IHP . G 7 ZN E 1 4801 4801 ZN ZN . H 8 ACE G 1 601 601 ACE ACE . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IHP . . . F 6 233.919 290.692 239.114 1 131.27 ? C1 IHP 2601 A 1 HETATM 2 C C2 IHP . . . F 6 235.346 291.01 238.705 1 131.27 ? C2 IHP 2601 A 1 HETATM 3 C C3 IHP . . . F 6 236.2 289.759 238.81 1 131.27 ? C3 IHP 2601 A 1 HETATM 4 C C4 IHP . . . F 6 235.639 288.675 237.907 1 131.27 ? C4 IHP 2601 A 1 HETATM 5 C C5 IHP . . . F 6 234.204 288.363 238.291 1 131.27 ? C5 IHP 2601 A 1 HETATM 6 C C6 IHP . . . F 6 233.353 289.617 238.204 1 131.27 ? C6 IHP 2601 A 1 HETATM 7 O O11 IHP . . . F 6 233.116 291.882 238.966 1 131.27 ? O11 IHP 2601 A 1 HETATM 8 P P1 IHP . . . F 6 232.775 292.898 240.182 1 131.27 ? P1 IHP 2601 A 1 HETATM 9 O O21 IHP . . . F 6 233.965 293.717 240.523 1 131.27 ? O21 IHP 2601 A 1 HETATM 10 O O31 IHP . . . F 6 231.585 293.732 239.713 1 131.27 ? O31 IHP 2601 A 1 HETATM 11 O O41 IHP . . . F 6 232.308 292.015 241.337 1 131.27 ? O41 IHP 2601 A 1 HETATM 12 O O12 IHP . . . F 6 235.336 291.418 237.32 1 131.27 ? O12 IHP 2601 A 1 HETATM 13 P P2 IHP . . . F 6 235.92 292.709 236.604 1 131.27 ? P2 IHP 2601 A 1 HETATM 14 O O22 IHP . . . F 6 234.961 293.226 235.593 1 131.27 ? O22 IHP 2601 A 1 HETATM 15 O O32 IHP . . . F 6 236.218 293.709 237.718 1 131.27 ? O32 IHP 2601 A 1 HETATM 16 O O42 IHP . . . F 6 237.245 292.265 235.994 1 131.27 ? O42 IHP 2601 A 1 HETATM 17 O O13 IHP . . . F 6 237.542 290.069 238.377 1 131.27 ? O13 IHP 2601 A 1 HETATM 18 P P3 IHP . . . F 6 238.789 290.347 239.409 1 131.27 ? P3 IHP 2601 A 1 HETATM 19 O O23 IHP . . . F 6 238.375 290.066 240.81 1 131.27 ? O23 IHP 2601 A 1 HETATM 20 O O33 IHP . . . F 6 239.204 291.8 239.183 1 131.27 ? O33 IHP 2601 A 1 HETATM 21 O O43 IHP . . . F 6 239.934 289.449 238.935 1 131.27 ? O43 IHP 2601 A 1 HETATM 22 O O14 IHP . . . F 6 236.437 287.484 238.073 1 131.27 ? O14 IHP 2601 A 1 HETATM 23 P P4 IHP . . . F 6 237.469 286.86 237.028 1 131.27 ? P4 IHP 2601 A 1 HETATM 24 O O24 IHP . . . F 6 238.644 287.765 236.89 1 131.27 ? O24 IHP 2601 A 1 HETATM 25 O O34 IHP . . . F 6 237.836 285.476 237.567 1 131.27 ? O34 IHP 2601 A 1 HETATM 26 O O44 IHP . . . F 6 236.691 286.679 235.722 1 131.27 ? O44 IHP 2601 A 1 HETATM 27 O O15 IHP . . . F 6 233.679 287.399 237.355 1 131.27 ? O15 IHP 2601 A 1 HETATM 28 P P5 IHP . . . F 6 232.774 286.116 237.701 1 131.27 ? P5 IHP 2601 A 1 HETATM 29 O O25 IHP . . . F 6 231.403 286.563 238.054 1 131.27 ? O25 IHP 2601 A 1 HETATM 30 O O35 IHP . . . F 6 233.492 285.401 238.844 1 131.27 ? O35 IHP 2601 A 1 HETATM 31 O O45 IHP . . . F 6 232.813 285.216 236.467 1 131.27 ? O45 IHP 2601 A 1 HETATM 32 O O16 IHP . . . F 6 232.024 289.294 238.664 1 131.27 ? O16 IHP 2601 A 1 HETATM 33 P P6 IHP . . . F 6 230.658 289.78 237.962 1 131.27 ? P6 IHP 2601 A 1 HETATM 34 O O26 IHP . . . F 6 230.39 291.203 238.297 1 131.27 ? O26 IHP 2601 A 1 HETATM 35 O O36 IHP . . . F 6 229.572 288.826 238.449 1 131.27 ? O36 IHP 2601 A 1 HETATM 36 O O46 IHP . . . F 6 230.855 289.541 236.469 1 131.27 ? O46 IHP 2601 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 36 #