data_7PG5
#
_model_server_result.job_id            7ffuALVIBrUsyGEKvt32oQ 
_model_server_result.datetime_utc      '2024-11-12 20:31:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7pg5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":1103}' 
#
_entry.id    7PG5 
#
_exptl.entry_id    7PG5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7PG5 
_cell.length_a            105.4251 
_cell.length_b            105.2443 
_cell.length_c            136.0864 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7PG5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     7PG5 
_atom_sites.fract_transf_matrix[1][1]    0.009485 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009502 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007348 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 PO4 A 1 1101 1 PO4 PO4 . 
D 3 PO4 A 1 1102 2 PO4 PO4 . 
E 4 GOL A 1 1103 4 GOL GOL . 
F 5 HOH A 1 1201 139 HOH HOH . 
F 5 HOH A 2 1202 136 HOH HOH . 
F 5 HOH A 3 1203 109 HOH HOH . 
F 5 HOH A 4 1204 137 HOH HOH . 
F 5 HOH A 5 1205 12 HOH HOH . 
F 5 HOH A 6 1206 56 HOH HOH . 
F 5 HOH A 7 1207 144 HOH HOH . 
F 5 HOH A 8 1208 11 HOH HOH . 
F 5 HOH A 9 1209 113 HOH HOH . 
F 5 HOH A 10 1210 92 HOH HOH . 
F 5 HOH A 11 1211 16 HOH HOH . 
F 5 HOH A 12 1212 140 HOH HOH . 
F 5 HOH A 13 1213 103 HOH HOH . 
F 5 HOH A 14 1214 94 HOH HOH . 
F 5 HOH A 15 1215 130 HOH HOH . 
F 5 HOH A 16 1216 116 HOH HOH . 
F 5 HOH A 17 1217 35 HOH HOH . 
F 5 HOH A 18 1218 20 HOH HOH . 
F 5 HOH A 19 1219 36 HOH HOH . 
F 5 HOH A 20 1220 6 HOH HOH . 
F 5 HOH A 21 1221 142 HOH HOH . 
F 5 HOH A 22 1222 147 HOH HOH . 
F 5 HOH A 23 1223 90 HOH HOH . 
F 5 HOH A 24 1224 17 HOH HOH . 
F 5 HOH A 25 1225 80 HOH HOH . 
F 5 HOH A 26 1226 41 HOH HOH . 
F 5 HOH A 27 1227 120 HOH HOH . 
F 5 HOH A 28 1228 91 HOH HOH . 
F 5 HOH A 29 1229 22 HOH HOH . 
F 5 HOH A 30 1230 66 HOH HOH . 
F 5 HOH A 31 1231 13 HOH HOH . 
F 5 HOH A 32 1232 123 HOH HOH . 
F 5 HOH A 33 1233 73 HOH HOH . 
F 5 HOH A 34 1234 62 HOH HOH . 
F 5 HOH A 35 1235 110 HOH HOH . 
F 5 HOH A 36 1236 1 HOH HOH . 
F 5 HOH A 37 1237 50 HOH HOH . 
F 5 HOH A 38 1238 37 HOH HOH . 
F 5 HOH A 39 1239 76 HOH HOH . 
F 5 HOH A 40 1240 128 HOH HOH . 
F 5 HOH A 41 1241 98 HOH HOH . 
F 5 HOH A 42 1242 122 HOH HOH . 
F 5 HOH A 43 1243 111 HOH HOH . 
F 5 HOH A 44 1244 4 HOH HOH . 
F 5 HOH A 45 1245 32 HOH HOH . 
F 5 HOH A 46 1246 108 HOH HOH . 
F 5 HOH A 47 1247 89 HOH HOH . 
F 5 HOH A 48 1248 78 HOH HOH . 
F 5 HOH A 49 1249 104 HOH HOH . 
F 5 HOH A 50 1250 106 HOH HOH . 
F 5 HOH A 51 1251 102 HOH HOH . 
F 5 HOH A 52 1252 24 HOH HOH . 
F 5 HOH A 53 1253 93 HOH HOH . 
F 5 HOH A 54 1254 49 HOH HOH . 
F 5 HOH A 55 1255 85 HOH HOH . 
F 5 HOH A 56 1256 5 HOH HOH . 
F 5 HOH A 57 1257 127 HOH HOH . 
F 5 HOH A 58 1258 40 HOH HOH . 
F 5 HOH A 59 1259 8 HOH HOH . 
F 5 HOH A 60 1260 25 HOH HOH . 
F 5 HOH A 61 1261 67 HOH HOH . 
F 5 HOH A 62 1262 48 HOH HOH . 
F 5 HOH A 63 1263 31 HOH HOH . 
F 5 HOH A 64 1264 47 HOH HOH . 
F 5 HOH A 65 1265 34 HOH HOH . 
F 5 HOH A 66 1266 54 HOH HOH . 
F 5 HOH A 67 1267 52 HOH HOH . 
F 5 HOH A 68 1268 75 HOH HOH . 
F 5 HOH A 69 1269 74 HOH HOH . 
F 5 HOH A 70 1270 19 HOH HOH . 
F 5 HOH A 71 1271 70 HOH HOH . 
F 5 HOH A 72 1272 82 HOH HOH . 
F 5 HOH A 73 1273 72 HOH HOH . 
F 5 HOH A 74 1274 53 HOH HOH . 
F 5 HOH A 75 1275 141 HOH HOH . 
F 5 HOH A 76 1276 87 HOH HOH . 
F 5 HOH A 77 1277 135 HOH HOH . 
F 5 HOH A 78 1278 105 HOH HOH . 
F 5 HOH A 79 1279 27 HOH HOH . 
F 5 HOH A 80 1280 126 HOH HOH . 
F 5 HOH A 81 1281 10 HOH HOH . 
F 5 HOH A 82 1282 7 HOH HOH . 
F 5 HOH A 83 1283 44 HOH HOH . 
F 5 HOH A 84 1284 68 HOH HOH . 
F 5 HOH A 85 1285 2 HOH HOH . 
F 5 HOH A 86 1286 28 HOH HOH . 
F 5 HOH A 87 1287 99 HOH HOH . 
F 5 HOH A 88 1288 30 HOH HOH . 
F 5 HOH A 89 1289 107 HOH HOH . 
F 5 HOH A 90 1290 23 HOH HOH . 
F 5 HOH A 91 1291 96 HOH HOH . 
F 5 HOH A 92 1292 26 HOH HOH . 
F 5 HOH A 93 1293 21 HOH HOH . 
F 5 HOH A 94 1294 3 HOH HOH . 
F 5 HOH A 95 1295 119 HOH HOH . 
F 5 HOH A 96 1296 55 HOH HOH . 
F 5 HOH A 97 1297 125 HOH HOH . 
F 5 HOH A 98 1298 100 HOH HOH . 
F 5 HOH A 99 1299 9 HOH HOH . 
F 5 HOH A 100 1300 14 HOH HOH . 
F 5 HOH A 101 1301 83 HOH HOH . 
F 5 HOH A 102 1302 59 HOH HOH . 
F 5 HOH A 103 1303 150 HOH HOH . 
F 5 HOH A 104 1304 15 HOH HOH . 
F 5 HOH A 105 1305 69 HOH HOH . 
F 5 HOH A 106 1306 63 HOH HOH . 
F 5 HOH A 107 1307 38 HOH HOH . 
F 5 HOH A 108 1308 131 HOH HOH . 
F 5 HOH A 109 1309 134 HOH HOH . 
F 5 HOH A 110 1310 61 HOH HOH . 
F 5 HOH A 111 1311 115 HOH HOH . 
F 5 HOH A 112 1312 121 HOH HOH . 
F 5 HOH A 113 1313 117 HOH HOH . 
F 5 HOH A 114 1314 129 HOH HOH . 
F 5 HOH A 115 1315 112 HOH HOH . 
F 5 HOH A 116 1316 81 HOH HOH . 
F 5 HOH A 117 1317 33 HOH HOH . 
F 5 HOH A 118 1318 88 HOH HOH . 
F 5 HOH A 119 1319 42 HOH HOH . 
F 5 HOH A 120 1320 95 HOH HOH . 
F 5 HOH A 121 1321 39 HOH HOH . 
F 5 HOH A 122 1322 118 HOH HOH . 
F 5 HOH A 123 1323 133 HOH HOH . 
F 5 HOH A 124 1324 77 HOH HOH . 
F 5 HOH A 125 1325 143 HOH HOH . 
F 5 HOH A 126 1326 114 HOH HOH . 
F 5 HOH A 127 1327 29 HOH HOH . 
F 5 HOH A 128 1328 45 HOH HOH . 
F 5 HOH A 129 1329 65 HOH HOH . 
F 5 HOH A 130 1330 43 HOH HOH . 
F 5 HOH A 131 1331 64 HOH HOH . 
F 5 HOH A 132 1332 145 HOH HOH . 
F 5 HOH A 133 1333 101 HOH HOH . 
F 5 HOH A 134 1334 148 HOH HOH . 
F 5 HOH A 135 1335 60 HOH HOH . 
F 5 HOH A 136 1336 71 HOH HOH . 
F 5 HOH A 137 1337 146 HOH HOH . 
F 5 HOH A 138 1338 97 HOH HOH . 
F 5 HOH A 139 1339 149 HOH HOH . 
F 5 HOH A 140 1340 132 HOH HOH . 
F 5 HOH A 141 1341 138 HOH HOH . 
F 5 HOH A 142 1342 151 HOH HOH . 
F 5 HOH A 143 1343 79 HOH HOH . 
G 5 HOH B 1 601 152 HOH HOH . 
G 5 HOH B 2 602 18 HOH HOH . 
G 5 HOH B 3 603 124 HOH HOH . 
G 5 HOH B 4 604 58 HOH HOH . 
G 5 HOH B 5 605 86 HOH HOH . 
G 5 HOH B 6 606 51 HOH HOH . 
G 5 HOH B 7 607 84 HOH HOH . 
G 5 HOH B 8 608 46 HOH HOH . 
G 5 HOH B 9 609 57 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 4 -1.476 -9.872 15.891 0.7 79.95 ? C1 GOL 1103 A 1 
HETATM 2 O O1 GOL . . . E 4 -1.623 -8.723 16.767 0.7 76.12 ? O1 GOL 1103 A 1 
HETATM 3 C C2 GOL . . . E 4 -2.175 -10.923 16.732 0.7 72.7 ? C2 GOL 1103 A 1 
HETATM 4 O O2 GOL . . . E 4 -2.508 -12.103 16.058 0.7 66.24 ? O2 GOL 1103 A 1 
HETATM 5 C C3 GOL . . . E 4 -3.579 -10.455 16.871 0.7 79.08 ? C3 GOL 1103 A 1 
HETATM 6 O O3 GOL . . . E 4 -4.105 -11.564 17.637 0.7 68.91 ? O3 GOL 1103 A 1 
#
_model_server_stats.io_time_ms              40 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    36 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#