data_7PG6 # _model_server_result.job_id BWzVjDGicewh783fNglfRw _model_server_result.datetime_utc '2025-01-24 03:29:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7pg6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1101}' # _entry.id 7PG6 # _exptl.entry_id 7PG6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 441.47 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S)-N~1~-{4-methyl-5-[2-(1,1,1-trifluoro-2-methylpropan-2-yl)pyridin-4-yl]-1,3-thiazol-2-yl}pyrrolidine-1,2-dicarboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7PG6 _cell.length_a 104.87 _cell.length_b 105.19 _cell.length_c 135.74 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PG6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASN 785 A ASN 785 1_555 D NA NA . A NA 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.84 ? metalc ? metalc2 A O ASP 787 A ASP 787 1_555 D NA NA . A NA 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.548 ? metalc ? metalc3 A OG SER 790 A SER 790 1_555 D NA NA . A NA 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.687 ? # _chem_comp.formula 'C19 H22 F3 N5 O2 S' _chem_comp.formula_weight 441.47 _chem_comp.id 1LT _chem_comp.mon_nstd_flag . _chem_comp.name (2S)-N~1~-{4-methyl-5-[2-(1,1,1-trifluoro-2-methylpropan-2-yl)pyridin-4-yl]-1,3-thiazol-2-yl}pyrrolidine-1,2-dicarboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Alpelisib # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C5 C6 1LT sing 1 n n C5 C4 1LT sing 2 n n C6 C7 1LT sing 3 n n C4 N2 1LT sing 4 n n N3 C8 1LT sing 5 n n N2 C7 1LT sing 6 n n N2 C3 1LT sing 7 n n C7 C8 1LT sing 8 n n C8 O1 1LT doub 9 n n N1 C3 1LT sing 10 n n N1 C2 1LT sing 11 n n C3 O 1LT doub 12 n n N C2 1LT doub 13 n y N C1 1LT sing 14 n y C2 S 1LT sing 15 n y C1 C 1LT sing 16 n n C1 C9 1LT doub 17 n y S C9 1LT sing 18 n y C9 C10 1LT sing 19 n n C10 C11 1LT doub 20 n y C10 C14 1LT sing 21 n y C11 C12 1LT sing 22 n y C14 C13 1LT doub 23 n y C12 N4 1LT doub 24 n y C13 N4 1LT sing 25 n y C13 C15 1LT sing 26 n n C16 C15 1LT sing 27 n n C15 C17 1LT sing 28 n n C15 C18 1LT sing 29 n n F1 C18 1LT sing 30 n n C18 F 1LT sing 31 n n C18 F2 1LT sing 32 n n C11 H1 1LT sing 33 n n C12 H2 1LT sing 34 n n C14 H3 1LT sing 35 n n C16 H4 1LT sing 36 n n C16 H5 1LT sing 37 n n C16 H6 1LT sing 38 n n C17 H7 1LT sing 39 n n C17 H8 1LT sing 40 n n C17 H9 1LT sing 41 n n C H10 1LT sing 42 n n C H11 1LT sing 43 n n C H12 1LT sing 44 n n N1 H13 1LT sing 45 n n C7 H14 1LT sing 46 n n N3 H15 1LT sing 47 n n N3 H16 1LT sing 48 n n C6 H17 1LT sing 49 n n C6 H18 1LT sing 50 n n C5 H19 1LT sing 51 n n C5 H20 1LT sing 52 n n C4 H21 1LT sing 53 n n C4 H22 1LT sing 54 n n # _atom_sites.entry_id 7PG6 _atom_sites.fract_transf_matrix[1][1] 0.009536 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009507 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007367 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 1LT A 1 1101 1102 1LT 1LT . D 4 NA A 1 1102 2 NA NA . E 5 HOH A 1 1201 42 HOH HOH . E 5 HOH A 2 1202 5 HOH HOH . E 5 HOH A 3 1203 31 HOH HOH . E 5 HOH A 4 1204 52 HOH HOH . E 5 HOH A 5 1205 29 HOH HOH . E 5 HOH A 6 1206 1 HOH HOH . E 5 HOH A 7 1207 35 HOH HOH . E 5 HOH A 8 1208 3 HOH HOH . E 5 HOH A 9 1209 48 HOH HOH . E 5 HOH A 10 1210 38 HOH HOH . E 5 HOH A 11 1211 59 HOH HOH . E 5 HOH A 12 1212 9 HOH HOH . E 5 HOH A 13 1213 33 HOH HOH . E 5 HOH A 14 1214 10 HOH HOH . E 5 HOH A 15 1215 58 HOH HOH . E 5 HOH A 16 1216 13 HOH HOH . E 5 HOH A 17 1217 21 HOH HOH . E 5 HOH A 18 1218 28 HOH HOH . E 5 HOH A 19 1219 40 HOH HOH . E 5 HOH A 20 1220 36 HOH HOH . E 5 HOH A 21 1221 61 HOH HOH . E 5 HOH A 22 1222 18 HOH HOH . E 5 HOH A 23 1223 15 HOH HOH . E 5 HOH A 24 1224 34 HOH HOH . E 5 HOH A 25 1225 17 HOH HOH . E 5 HOH A 26 1226 2 HOH HOH . E 5 HOH A 27 1227 51 HOH HOH . E 5 HOH A 28 1228 8 HOH HOH . E 5 HOH A 29 1229 7 HOH HOH . E 5 HOH A 30 1230 4 HOH HOH . E 5 HOH A 31 1231 27 HOH HOH . E 5 HOH A 32 1232 25 HOH HOH . E 5 HOH A 33 1233 20 HOH HOH . E 5 HOH A 34 1234 43 HOH HOH . E 5 HOH A 35 1235 14 HOH HOH . E 5 HOH A 36 1236 53 HOH HOH . E 5 HOH A 37 1237 16 HOH HOH . E 5 HOH A 38 1238 19 HOH HOH . E 5 HOH A 39 1239 32 HOH HOH . E 5 HOH A 40 1240 37 HOH HOH . E 5 HOH A 41 1241 46 HOH HOH . E 5 HOH A 42 1242 6 HOH HOH . E 5 HOH A 43 1243 30 HOH HOH . E 5 HOH A 44 1244 26 HOH HOH . E 5 HOH A 45 1245 24 HOH HOH . E 5 HOH A 46 1246 41 HOH HOH . E 5 HOH A 47 1247 22 HOH HOH . E 5 HOH A 48 1248 39 HOH HOH . E 5 HOH A 49 1249 54 HOH HOH . E 5 HOH A 50 1250 47 HOH HOH . E 5 HOH A 51 1251 12 HOH HOH . E 5 HOH A 52 1252 23 HOH HOH . E 5 HOH A 53 1253 56 HOH HOH . E 5 HOH A 54 1254 60 HOH HOH . E 5 HOH A 55 1255 55 HOH HOH . E 5 HOH A 56 1256 44 HOH HOH . F 5 HOH B 1 601 11 HOH HOH . F 5 HOH B 2 602 45 HOH HOH . F 5 HOH B 3 603 49 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 1LT . . . C 3 -3.063 -11.415 16.388 1 53.89 ? C1 1LT 1101 A 1 HETATM 2 C C2 1LT . . . C 3 -1.544 -10.07 15.25 1 50.95 ? C2 1LT 1101 A 1 HETATM 3 C C3 1LT . . . C 3 0.047 -8.458 14.186 1 56.46 ? C3 1LT 1101 A 1 HETATM 4 O O1 1LT . . . C 3 1.383 -4.536 13.955 1 47.61 ? O1 1LT 1101 A 1 HETATM 5 C C11 1LT . . . C 3 -4.337 -10.97 19.423 1 36.08 ? C11 1LT 1101 A 1 HETATM 6 C C12 1LT . . . C 3 -4.648 -10.781 20.793 1 40.59 ? C12 1LT 1101 A 1 HETATM 7 C C13 1LT . . . C 3 -2.663 -9.541 21.107 1 46.14 ? C13 1LT 1101 A 1 HETATM 8 C C14 1LT . . . C 3 -2.279 -9.674 19.78 1 41.15 ? C14 1LT 1101 A 1 HETATM 9 C C15 1LT . . . C 3 -1.802 -8.75 22.101 1 49.79 ? C15 1LT 1101 A 1 HETATM 10 C C16 1LT . . . C 3 -0.664 -8.025 21.371 1 46.85 ? C16 1LT 1101 A 1 HETATM 11 C C17 1LT . . . C 3 -2.763 -7.766 22.758 1 42.22 ? C17 1LT 1101 A 1 HETATM 12 C C18 1LT . . . C 3 -1.232 -9.718 23.167 1 61.28 ? C18 1LT 1101 A 1 HETATM 13 F F2 1LT . . . C 3 -0.551 -8.99 24.032 1 81.44 ? F2 1LT 1101 A 1 HETATM 14 F F 1LT . . . C 3 -2.274 -10.321 23.774 1 68.22 ? F 1LT 1101 A 1 HETATM 15 F F1 1LT . . . C 3 -0.411 -10.648 22.621 1 56.82 ? F1 1LT 1101 A 1 HETATM 16 N N4 1LT . . . C 3 -3.793 -10.072 21.548 1 50.19 ? N4 1LT 1101 A 1 HETATM 17 C C10 1LT . . . C 3 -3.154 -10.428 18.919 1 42.76 ? C10 1LT 1101 A 1 HETATM 18 C C9 1LT . . . C 3 -2.708 -10.523 17.46 1 49.21 ? C9 1LT 1101 A 1 HETATM 19 C C 1LT . . . C 3 -4.033 -12.574 16.477 1 39.35 ? C 1LT 1101 A 1 HETATM 20 S S 1LT . . . C 3 -1.567 -9.413 16.827 1 191.78 ? S 1LT 1101 A 1 HETATM 21 N N 1LT . . . C 3 -2.406 -11.102 15.228 1 57.05 ? N 1LT 1101 A 1 HETATM 22 N N1 1LT . . . C 3 -0.781 -9.601 14.114 1 54.15 ? N1 1LT 1101 A 1 HETATM 23 O O 1LT . . . C 3 0.163 -7.834 15.188 1 60.77 ? O 1LT 1101 A 1 HETATM 24 N N2 1LT . . . C 3 0.759 -8.042 13.01 1 58.66 ? N2 1LT 1101 A 1 HETATM 25 C C7 1LT . . . C 3 1.735 -6.754 12.95 1 61.94 ? C7 1LT 1101 A 1 HETATM 26 C C8 1LT . . . C 3 0.885 -5.525 13.412 1 46.46 ? C8 1LT 1101 A 1 HETATM 27 N N3 1LT . . . C 3 -0.513 -5.551 13.206 1 42.99 ? N3 1LT 1101 A 1 HETATM 28 C C6 1LT . . . C 3 2.157 -6.662 11.748 1 57.63 ? C6 1LT 1101 A 1 HETATM 29 C C5 1LT . . . C 3 1.848 -8.003 11.06 1 49.04 ? C5 1LT 1101 A 1 HETATM 30 C C4 1LT . . . C 3 0.73 -8.606 11.866 1 50.77 ? C4 1LT 1101 A 1 # _model_server_stats.io_time_ms 39 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 352 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 30 #