data_7PIU # _model_server_result.job_id gqA7OUiVCd3SZudrHUu3rQ _model_server_result.datetime_utc '2024-12-21 14:37:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7piu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":401}' # _entry.id 7PIU # _exptl.entry_id 7PIU _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 40.078 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7PIU _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PIU _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 48 R CYS 40 1_555 A SG CYS 287 R CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 A SG CYS 279 R CYS 271 1_555 A SG CYS 285 R CYS 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 B SG CYS 2 P CYS 2 1_555 B SG CYS 8 P CYS 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf4 F SG CYS 22 N CYS 22 1_555 F SG CYS 96 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf5 F SG CYS 99 N CYS 99 1_555 F SG CYS 107 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? covale ? covale1 B C CYS 2 P CYS 2 1_555 B N DAL 3 P DAL 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale2 B C DAL 3 P DAL 3 1_555 B N HIS 4 P HIS 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale3 B C HIS 4 P HIS 4 1_555 B N DPN 5 P DPN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale4 B C DPN 5 P DPN 5 1_555 B N ARG 6 P ARG 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? metalc ? metalc1 A OE2 GLU 108 R GLU 100 1_555 G CA CA . R CA 401 1_555 ? A ? ? ? ? ? ? ? ? ? ? 3.016 ? metalc ? metalc2 A OE2 GLU 108 R GLU 100 1_555 G CA CA . R CA 401 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.899 ? metalc ? metalc3 A OD1 ASP 134 R ASP 126 1_555 G CA CA . R CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.868 ? metalc ? metalc4 A OD2 ASP 134 R ASP 126 1_555 G CA CA . R CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.068 ? metalc ? metalc5 G CA CA . R CA 401 1_555 B O DPN 5 P DPN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7PIU _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 7 CA R 1 401 1 CA CA . H 8 HOH R 1 501 27 HOH HOH . H 8 HOH R 2 502 30 HOH HOH . H 8 HOH R 3 503 29 HOH HOH . H 8 HOH R 4 504 72 HOH HOH . I 8 HOH P 1 101 62 HOH HOH . I 8 HOH P 2 102 63 HOH HOH . J 8 HOH A 1 401 65 HOH HOH . J 8 HOH A 2 402 32 HOH HOH . J 8 HOH A 3 403 73 HOH HOH . J 8 HOH A 4 404 87 HOH HOH . J 8 HOH A 5 405 28 HOH HOH . J 8 HOH A 6 406 33 HOH HOH . J 8 HOH A 7 407 5 HOH HOH . J 8 HOH A 8 408 37 HOH HOH . J 8 HOH A 9 409 39 HOH HOH . J 8 HOH A 10 410 78 HOH HOH . J 8 HOH A 11 411 38 HOH HOH . J 8 HOH A 12 412 70 HOH HOH . J 8 HOH A 13 413 34 HOH HOH . J 8 HOH A 14 414 3 HOH HOH . J 8 HOH A 15 415 85 HOH HOH . J 8 HOH A 16 416 79 HOH HOH . J 8 HOH A 17 417 71 HOH HOH . J 8 HOH A 18 418 35 HOH HOH . J 8 HOH A 19 419 64 HOH HOH . J 8 HOH A 20 420 2 HOH HOH . J 8 HOH A 21 421 23 HOH HOH . K 8 HOH B 1 401 60 HOH HOH . K 8 HOH B 2 402 6 HOH HOH . K 8 HOH B 3 403 83 HOH HOH . K 8 HOH B 4 404 44 HOH HOH . K 8 HOH B 5 405 52 HOH HOH . K 8 HOH B 6 406 55 HOH HOH . K 8 HOH B 7 407 51 HOH HOH . K 8 HOH B 8 408 59 HOH HOH . K 8 HOH B 9 409 36 HOH HOH . K 8 HOH B 10 410 81 HOH HOH . K 8 HOH B 11 411 56 HOH HOH . K 8 HOH B 12 412 16 HOH HOH . K 8 HOH B 13 413 77 HOH HOH . K 8 HOH B 14 414 88 HOH HOH . K 8 HOH B 15 415 13 HOH HOH . K 8 HOH B 16 416 17 HOH HOH . K 8 HOH B 17 417 25 HOH HOH . K 8 HOH B 18 418 49 HOH HOH . K 8 HOH B 19 419 24 HOH HOH . K 8 HOH B 20 420 20 HOH HOH . K 8 HOH B 21 421 75 HOH HOH . K 8 HOH B 22 422 31 HOH HOH . K 8 HOH B 23 423 9 HOH HOH . K 8 HOH B 24 424 57 HOH HOH . K 8 HOH B 25 425 15 HOH HOH . K 8 HOH B 26 426 50 HOH HOH . K 8 HOH B 27 427 53 HOH HOH . K 8 HOH B 28 428 43 HOH HOH . K 8 HOH B 29 429 58 HOH HOH . K 8 HOH B 30 430 82 HOH HOH . K 8 HOH B 31 431 41 HOH HOH . K 8 HOH B 32 432 86 HOH HOH . K 8 HOH B 33 433 47 HOH HOH . K 8 HOH B 34 434 84 HOH HOH . K 8 HOH B 35 435 8 HOH HOH . K 8 HOH B 36 436 48 HOH HOH . K 8 HOH B 37 437 42 HOH HOH . K 8 HOH B 38 438 67 HOH HOH . K 8 HOH B 39 439 66 HOH HOH . K 8 HOH B 40 440 46 HOH HOH . K 8 HOH B 41 441 10 HOH HOH . K 8 HOH B 42 442 45 HOH HOH . K 8 HOH B 43 443 14 HOH HOH . K 8 HOH B 44 444 11 HOH HOH . K 8 HOH B 45 445 80 HOH HOH . K 8 HOH B 46 446 7 HOH HOH . K 8 HOH B 47 447 40 HOH HOH . K 8 HOH B 48 448 74 HOH HOH . K 8 HOH B 49 449 54 HOH HOH . K 8 HOH B 50 450 1 HOH HOH . L 8 HOH G 1 101 68 HOH HOH . L 8 HOH G 2 102 12 HOH HOH . L 8 HOH G 3 103 4 HOH HOH . L 8 HOH G 4 104 18 HOH HOH . L 8 HOH G 5 105 69 HOH HOH . M 8 HOH N 1 201 22 HOH HOH . M 8 HOH N 2 202 26 HOH HOH . M 8 HOH N 3 203 21 HOH HOH . M 8 HOH N 4 204 61 HOH HOH . M 8 HOH N 5 205 76 HOH HOH . M 8 HOH N 6 206 19 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 7 _atom_site.Cartn_x 108.352 _atom_site.Cartn_y 104.617 _atom_site.Cartn_z 147.9 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 34.82 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 401 _atom_site.auth_asym_id R _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #