data_7PJ3 # _model_server_result.job_id mOQfEeJHn4V_YZc8eaEJLA _model_server_result.datetime_utc '2024-10-18 15:29:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7pj3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":701}' # _entry.id 7PJ3 # _exptl.entry_id 7PJ3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.278 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PENTAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7PJ3 _cell.length_a 47.276 _cell.length_b 92.614 _cell.length_c 124.392 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PJ3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 16 AAA ASP 421 1_555 F CA CA . AAA CA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc2 A OD2 ASP 18 AAA ASP 423 1_555 F CA CA . AAA CA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.579 ? metalc ? metalc3 A OE1 GLU 20 AAA GLU 425 1_555 F CA CA . AAA CA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc4 A OD2 ASP 98 AAA ASP 503 1_555 F CA CA . AAA CA 705 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc5 A O GLY 115 AAA GLY 520 1_555 F CA CA . AAA CA 705 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? # _chem_comp.formula 'C10 H22 O6' _chem_comp.formula_weight 238.278 _chem_comp.id 1PE _chem_comp.mon_nstd_flag . _chem_comp.name 'PENTAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms PEG400 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OH2 C12 1PE sing 1 n n OH2 HO2 1PE sing 2 n n C12 C22 1PE sing 3 n n C12 H121 1PE sing 4 n n C12 H122 1PE sing 5 n n C22 OH3 1PE sing 6 n n C22 H221 1PE sing 7 n n C22 H222 1PE sing 8 n n OH3 C23 1PE sing 9 n n C13 C23 1PE sing 10 n n C13 OH4 1PE sing 11 n n C13 H131 1PE sing 12 n n C13 H132 1PE sing 13 n n C23 H231 1PE sing 14 n n C23 H232 1PE sing 15 n n OH4 C24 1PE sing 16 n n C14 C24 1PE sing 17 n n C14 OH5 1PE sing 18 n n C14 H141 1PE sing 19 n n C14 H142 1PE sing 20 n n C24 H241 1PE sing 21 n n C24 H242 1PE sing 22 n n OH5 C25 1PE sing 23 n n C15 C25 1PE sing 24 n n C15 OH6 1PE sing 25 n n C15 H151 1PE sing 26 n n C15 H152 1PE sing 27 n n C25 H251 1PE sing 28 n n C25 H252 1PE sing 29 n n OH6 C26 1PE sing 30 n n C16 C26 1PE sing 31 n n C16 OH7 1PE sing 32 n n C16 H161 1PE sing 33 n n C16 H162 1PE sing 34 n n C26 H261 1PE sing 35 n n C26 H262 1PE sing 36 n n OH7 HO7 1PE sing 37 n n # _atom_sites.entry_id 7PJ3 _atom_sites.fract_transf_matrix[1][1] 0.021152 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010798 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008039 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1PE AAA 1 701 701 1PE 1PE . C 3 PGE AAA 1 702 703 PGE PGE . D 4 PEG AAA 1 703 704 PEG PEG . E 4 PEG AAA 1 704 705 PEG PEG . F 5 CA AAA 1 705 1 CA CA . G 6 HOH AAA 1 801 132 HOH HOH . G 6 HOH AAA 2 802 86 HOH HOH . G 6 HOH AAA 3 803 125 HOH HOH . G 6 HOH AAA 4 804 113 HOH HOH . G 6 HOH AAA 5 805 136 HOH HOH . G 6 HOH AAA 6 806 127 HOH HOH . G 6 HOH AAA 7 807 151 HOH HOH . G 6 HOH AAA 8 808 160 HOH HOH . G 6 HOH AAA 9 809 79 HOH HOH . G 6 HOH AAA 10 810 43 HOH HOH . G 6 HOH AAA 11 811 45 HOH HOH . G 6 HOH AAA 12 812 57 HOH HOH . G 6 HOH AAA 13 813 148 HOH HOH . G 6 HOH AAA 14 814 16 HOH HOH . G 6 HOH AAA 15 815 158 HOH HOH . G 6 HOH AAA 16 816 20 HOH HOH . G 6 HOH AAA 17 817 105 HOH HOH . G 6 HOH AAA 18 818 61 HOH HOH . G 6 HOH AAA 19 819 52 HOH HOH . G 6 HOH AAA 20 820 164 HOH HOH . G 6 HOH AAA 21 821 94 HOH HOH . G 6 HOH AAA 22 822 161 HOH HOH . G 6 HOH AAA 23 823 81 HOH HOH . G 6 HOH AAA 24 824 82 HOH HOH . G 6 HOH AAA 25 825 55 HOH HOH . G 6 HOH AAA 26 826 141 HOH HOH . G 6 HOH AAA 27 827 154 HOH HOH . G 6 HOH AAA 28 828 87 HOH HOH . G 6 HOH AAA 29 829 25 HOH HOH . G 6 HOH AAA 30 830 145 HOH HOH . G 6 HOH AAA 31 831 69 HOH HOH . G 6 HOH AAA 32 832 21 HOH HOH . G 6 HOH AAA 33 833 183 HOH HOH . G 6 HOH AAA 34 834 144 HOH HOH . G 6 HOH AAA 35 835 103 HOH HOH . G 6 HOH AAA 36 836 108 HOH HOH . G 6 HOH AAA 37 837 118 HOH HOH . G 6 HOH AAA 38 838 33 HOH HOH . G 6 HOH AAA 39 839 36 HOH HOH . G 6 HOH AAA 40 840 142 HOH HOH . G 6 HOH AAA 41 841 56 HOH HOH . G 6 HOH AAA 42 842 48 HOH HOH . G 6 HOH AAA 43 843 22 HOH HOH . G 6 HOH AAA 44 844 73 HOH HOH . G 6 HOH AAA 45 845 9 HOH HOH . G 6 HOH AAA 46 846 106 HOH HOH . G 6 HOH AAA 47 847 101 HOH HOH . G 6 HOH AAA 48 848 134 HOH HOH . G 6 HOH AAA 49 849 46 HOH HOH . G 6 HOH AAA 50 850 5 HOH HOH . G 6 HOH AAA 51 851 178 HOH HOH . G 6 HOH AAA 52 852 112 HOH HOH . G 6 HOH AAA 53 853 76 HOH HOH . G 6 HOH AAA 54 854 98 HOH HOH . G 6 HOH AAA 55 855 67 HOH HOH . G 6 HOH AAA 56 856 179 HOH HOH . G 6 HOH AAA 57 857 12 HOH HOH . G 6 HOH AAA 58 858 131 HOH HOH . G 6 HOH AAA 59 859 27 HOH HOH . G 6 HOH AAA 60 860 40 HOH HOH . G 6 HOH AAA 61 861 116 HOH HOH . G 6 HOH AAA 62 862 149 HOH HOH . G 6 HOH AAA 63 863 80 HOH HOH . G 6 HOH AAA 64 864 62 HOH HOH . G 6 HOH AAA 65 865 3 HOH HOH . G 6 HOH AAA 66 866 71 HOH HOH . G 6 HOH AAA 67 867 171 HOH HOH . G 6 HOH AAA 68 868 6 HOH HOH . G 6 HOH AAA 69 869 176 HOH HOH . G 6 HOH AAA 70 870 38 HOH HOH . G 6 HOH AAA 71 871 13 HOH HOH . G 6 HOH AAA 72 872 14 HOH HOH . G 6 HOH AAA 73 873 163 HOH HOH . G 6 HOH AAA 74 874 115 HOH HOH . G 6 HOH AAA 75 875 177 HOH HOH . G 6 HOH AAA 76 876 162 HOH HOH . G 6 HOH AAA 77 877 140 HOH HOH . G 6 HOH AAA 78 878 23 HOH HOH . G 6 HOH AAA 79 879 78 HOH HOH . G 6 HOH AAA 80 880 188 HOH HOH . G 6 HOH AAA 81 881 30 HOH HOH . G 6 HOH AAA 82 882 37 HOH HOH . G 6 HOH AAA 83 883 49 HOH HOH . G 6 HOH AAA 84 884 114 HOH HOH . G 6 HOH AAA 85 885 168 HOH HOH . G 6 HOH AAA 86 886 53 HOH HOH . G 6 HOH AAA 87 887 47 HOH HOH . G 6 HOH AAA 88 888 24 HOH HOH . G 6 HOH AAA 89 889 85 HOH HOH . G 6 HOH AAA 90 890 110 HOH HOH . G 6 HOH AAA 91 891 97 HOH HOH . G 6 HOH AAA 92 892 42 HOH HOH . G 6 HOH AAA 93 893 10 HOH HOH . G 6 HOH AAA 94 894 92 HOH HOH . G 6 HOH AAA 95 895 39 HOH HOH . G 6 HOH AAA 96 896 18 HOH HOH . G 6 HOH AAA 97 897 15 HOH HOH . G 6 HOH AAA 98 898 1 HOH HOH . G 6 HOH AAA 99 899 83 HOH HOH . G 6 HOH AAA 100 900 34 HOH HOH . G 6 HOH AAA 101 901 109 HOH HOH . G 6 HOH AAA 102 902 169 HOH HOH . G 6 HOH AAA 103 903 96 HOH HOH . G 6 HOH AAA 104 904 72 HOH HOH . G 6 HOH AAA 105 905 173 HOH HOH . G 6 HOH AAA 106 906 68 HOH HOH . G 6 HOH AAA 107 907 170 HOH HOH . G 6 HOH AAA 108 908 41 HOH HOH . G 6 HOH AAA 109 909 64 HOH HOH . G 6 HOH AAA 110 910 32 HOH HOH . G 6 HOH AAA 111 911 75 HOH HOH . G 6 HOH AAA 112 912 93 HOH HOH . G 6 HOH AAA 113 913 29 HOH HOH . G 6 HOH AAA 114 914 152 HOH HOH . G 6 HOH AAA 115 915 175 HOH HOH . G 6 HOH AAA 116 916 99 HOH HOH . G 6 HOH AAA 117 917 88 HOH HOH . G 6 HOH AAA 118 918 60 HOH HOH . G 6 HOH AAA 119 919 189 HOH HOH . G 6 HOH AAA 120 920 153 HOH HOH . G 6 HOH AAA 121 921 119 HOH HOH . G 6 HOH AAA 122 922 126 HOH HOH . G 6 HOH AAA 123 923 28 HOH HOH . G 6 HOH AAA 124 924 19 HOH HOH . G 6 HOH AAA 125 925 58 HOH HOH . G 6 HOH AAA 126 926 17 HOH HOH . G 6 HOH AAA 127 927 63 HOH HOH . G 6 HOH AAA 128 928 181 HOH HOH . G 6 HOH AAA 129 929 121 HOH HOH . G 6 HOH AAA 130 930 84 HOH HOH . G 6 HOH AAA 131 931 2 HOH HOH . G 6 HOH AAA 132 932 31 HOH HOH . G 6 HOH AAA 133 933 35 HOH HOH . G 6 HOH AAA 134 934 59 HOH HOH . G 6 HOH AAA 135 935 90 HOH HOH . G 6 HOH AAA 136 936 150 HOH HOH . G 6 HOH AAA 137 937 167 HOH HOH . G 6 HOH AAA 138 938 130 HOH HOH . G 6 HOH AAA 139 939 157 HOH HOH . G 6 HOH AAA 140 940 44 HOH HOH . G 6 HOH AAA 141 941 50 HOH HOH . G 6 HOH AAA 142 942 11 HOH HOH . G 6 HOH AAA 143 943 146 HOH HOH . G 6 HOH AAA 144 944 137 HOH HOH . G 6 HOH AAA 145 945 74 HOH HOH . G 6 HOH AAA 146 946 185 HOH HOH . G 6 HOH AAA 147 947 4 HOH HOH . G 6 HOH AAA 148 948 184 HOH HOH . G 6 HOH AAA 149 949 91 HOH HOH . G 6 HOH AAA 150 950 95 HOH HOH . G 6 HOH AAA 151 951 102 HOH HOH . G 6 HOH AAA 152 952 138 HOH HOH . G 6 HOH AAA 153 953 128 HOH HOH . G 6 HOH AAA 154 954 111 HOH HOH . G 6 HOH AAA 155 955 107 HOH HOH . G 6 HOH AAA 156 956 129 HOH HOH . G 6 HOH AAA 157 957 187 HOH HOH . G 6 HOH AAA 158 958 51 HOH HOH . G 6 HOH AAA 159 959 104 HOH HOH . G 6 HOH AAA 160 960 156 HOH HOH . G 6 HOH AAA 161 961 26 HOH HOH . G 6 HOH AAA 162 962 70 HOH HOH . G 6 HOH AAA 163 963 155 HOH HOH . G 6 HOH AAA 164 964 139 HOH HOH . G 6 HOH AAA 165 965 124 HOH HOH . G 6 HOH AAA 166 966 89 HOH HOH . G 6 HOH AAA 167 967 147 HOH HOH . G 6 HOH AAA 168 968 117 HOH HOH . G 6 HOH AAA 169 969 159 HOH HOH . G 6 HOH AAA 170 970 122 HOH HOH . G 6 HOH AAA 171 971 172 HOH HOH . G 6 HOH AAA 172 972 123 HOH HOH . G 6 HOH AAA 173 973 66 HOH HOH . G 6 HOH AAA 174 974 182 HOH HOH . G 6 HOH AAA 175 975 166 HOH HOH . G 6 HOH AAA 176 976 135 HOH HOH . G 6 HOH AAA 177 977 180 HOH HOH . G 6 HOH AAA 178 978 143 HOH HOH . G 6 HOH AAA 179 979 165 HOH HOH . G 6 HOH AAA 180 980 186 HOH HOH . G 6 HOH AAA 181 981 174 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OH2 1PE . . . B 2 -7.362 26.94 -6.459 1 39.78 0 OH2 1PE 701 AAA 1 HETATM 2 C C12 1PE . . . B 2 -7.888 26.563 -5.213 1 45.39 0 C12 1PE 701 AAA 1 HETATM 3 C C22 1PE . . . B 2 -9.38 26.571 -5.153 1 37.36 0 C22 1PE 701 AAA 1 HETATM 4 O OH3 1PE . . . B 2 -9.953 27.721 -5.787 1 30.35 0 OH3 1PE 701 AAA 1 HETATM 5 C C13 1PE . . . B 2 -11.683 28.564 -7.226 1 23.36 0 C13 1PE 701 AAA 1 HETATM 6 C C23 1PE . . . B 2 -10.95 27.362 -6.745 1 24.7 0 C23 1PE 701 AAA 1 HETATM 7 O OH4 1PE . . . B 2 -10.856 29.353 -8.069 1 23.9 0 OH4 1PE 701 AAA 1 HETATM 8 C C14 1PE . . . B 2 -10.592 31.296 -9.431 1 25.14 0 C14 1PE 701 AAA 1 HETATM 9 C C24 1PE . . . B 2 -11.515 30.53 -8.534 1 25.3 0 C24 1PE 701 AAA 1 HETATM 10 O OH5 1PE . . . B 2 -9.451 31.699 -8.68 1 24.76 0 OH5 1PE 701 AAA 1 HETATM 11 C C15 1PE . . . B 2 -7.418 32.989 -8.684 1 28.3 0 C15 1PE 701 AAA 1 HETATM 12 C C25 1PE . . . B 2 -8.671 32.649 -9.398 1 27.08 0 C25 1PE 701 AAA 1 HETATM 13 O OH6 1PE . . . B 2 -6.747 31.785 -8.377 1 31.33 0 OH6 1PE 701 AAA 1 HETATM 14 C C16 1PE . . . B 2 -4.898 30.676 -7.392 1 31.16 0 C16 1PE 701 AAA 1 HETATM 15 C C26 1PE . . . B 2 -5.539 32.006 -7.667 1 34.53 0 C26 1PE 701 AAA 1 HETATM 16 O OH7 1PE . . . B 2 -5.526 29.978 -6.323 1 38.73 0 OH7 1PE 701 AAA 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 16 #