data_7PJ6 # _model_server_result.job_id pGXiiCsnZUmrcioXwCJUPQ _model_server_result.datetime_utc '2025-01-10 07:05:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7pj6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":704}' # _entry.id 7PJ6 # _exptl.entry_id 7PJ6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7PJ6 _cell.length_a 47.291 _cell.length_b 92.543 _cell.length_c 124.795 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PJ6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 AMU NAG C1 O1 . O4 HO4 . sing 2 ? 2 3 2 NAG AMU C1 O1 . O4 HO4 . sing 3 ? 2 4 3 AMU NAG C1 O1 . O4 HO4 . sing 4 ? 2 5 4 NAG AMU C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B NAG 1 AbA 1 NAG AbA 710 NAG 2 n B AMU 2 AbA 2 AMU AcA 709 AMU 2 n B NAG 3 AbA 3 NAG AdA 708 NAG 2 n B AMU 4 AbA 4 AMU AeA 707 AMU 2 n B NAG 5 AbA 5 NAG AfA 706 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B O4 NAG . AbA NAG 1 1_555 B C1 AMU . AbA AMU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.417 ? covale ? covale2 B O4 AMU . AbA AMU 2 1_555 B C1 NAG . AbA NAG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.47 ? covale ? covale3 B O4 NAG . AbA NAG 3 1_555 B C1 AMU . AbA AMU 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale4 B O4 AMU . AbA AMU 4 1_555 B C1 NAG . AbA NAG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.419 ? metalc ? metalc1 A OD2 ASP 16 AAA ASP 421 1_555 F CA CA . AAA CA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc2 A OD2 ASP 18 AAA ASP 423 1_555 F CA CA . AAA CA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.576 ? metalc ? metalc3 A OE1 GLU 20 AAA GLU 425 1_555 F CA CA . AAA CA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? metalc ? metalc4 A OD2 ASP 98 AAA ASP 503 1_555 F CA CA . AAA CA 704 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc5 A O GLY 115 AAA GLY 520 1_555 F CA CA . AAA CA 704 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7PJ6 _atom_sites.fract_transf_matrix[1][1] 0.021146 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010806 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008013 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 1PE AAA 1 701 701 1PE 1PE . D 4 PGE AAA 1 702 711 PGE PGE . E 5 PEG AAA 1 703 712 PEG PEG . F 6 CA AAA 1 704 1 CA CA . G 7 HOH AAA 1 801 164 HOH HOH . G 7 HOH AAA 2 802 153 HOH HOH . G 7 HOH AAA 3 803 209 HOH HOH . G 7 HOH AAA 4 804 19 HOH HOH . G 7 HOH AAA 5 805 148 HOH HOH . G 7 HOH AAA 6 806 147 HOH HOH . G 7 HOH AAA 7 807 190 HOH HOH . G 7 HOH AAA 8 808 126 HOH HOH . G 7 HOH AAA 9 809 231 HOH HOH . G 7 HOH AAA 10 810 172 HOH HOH . G 7 HOH AAA 11 811 112 HOH HOH . G 7 HOH AAA 12 812 134 HOH HOH . G 7 HOH AAA 13 813 76 HOH HOH . G 7 HOH AAA 14 814 59 HOH HOH . G 7 HOH AAA 15 815 69 HOH HOH . G 7 HOH AAA 16 816 211 HOH HOH . G 7 HOH AAA 17 817 212 HOH HOH . G 7 HOH AAA 18 818 12 HOH HOH . G 7 HOH AAA 19 819 42 HOH HOH . G 7 HOH AAA 20 820 183 HOH HOH . G 7 HOH AAA 21 821 218 HOH HOH . G 7 HOH AAA 22 822 122 HOH HOH . G 7 HOH AAA 23 823 58 HOH HOH . G 7 HOH AAA 24 824 131 HOH HOH . G 7 HOH AAA 25 825 11 HOH HOH . G 7 HOH AAA 26 826 162 HOH HOH . G 7 HOH AAA 27 827 61 HOH HOH . G 7 HOH AAA 28 828 98 HOH HOH . G 7 HOH AAA 29 829 155 HOH HOH . G 7 HOH AAA 30 830 32 HOH HOH . G 7 HOH AAA 31 831 135 HOH HOH . G 7 HOH AAA 32 832 7 HOH HOH . G 7 HOH AAA 33 833 186 HOH HOH . G 7 HOH AAA 34 834 119 HOH HOH . G 7 HOH AAA 35 835 184 HOH HOH . G 7 HOH AAA 36 836 159 HOH HOH . G 7 HOH AAA 37 837 13 HOH HOH . G 7 HOH AAA 38 838 67 HOH HOH . G 7 HOH AAA 39 839 208 HOH HOH . G 7 HOH AAA 40 840 220 HOH HOH . G 7 HOH AAA 41 841 71 HOH HOH . G 7 HOH AAA 42 842 34 HOH HOH . G 7 HOH AAA 43 843 60 HOH HOH . G 7 HOH AAA 44 844 123 HOH HOH . G 7 HOH AAA 45 845 203 HOH HOH . G 7 HOH AAA 46 846 105 HOH HOH . G 7 HOH AAA 47 847 169 HOH HOH . G 7 HOH AAA 48 848 88 HOH HOH . G 7 HOH AAA 49 849 194 HOH HOH . G 7 HOH AAA 50 850 207 HOH HOH . G 7 HOH AAA 51 851 167 HOH HOH . G 7 HOH AAA 52 852 75 HOH HOH . G 7 HOH AAA 53 853 114 HOH HOH . G 7 HOH AAA 54 854 141 HOH HOH . G 7 HOH AAA 55 855 178 HOH HOH . G 7 HOH AAA 56 856 36 HOH HOH . G 7 HOH AAA 57 857 41 HOH HOH . G 7 HOH AAA 58 858 121 HOH HOH . G 7 HOH AAA 59 859 24 HOH HOH . G 7 HOH AAA 60 860 56 HOH HOH . G 7 HOH AAA 61 861 15 HOH HOH . G 7 HOH AAA 62 862 115 HOH HOH . G 7 HOH AAA 63 863 234 HOH HOH . G 7 HOH AAA 64 864 72 HOH HOH . G 7 HOH AAA 65 865 52 HOH HOH . G 7 HOH AAA 66 866 2 HOH HOH . G 7 HOH AAA 67 867 120 HOH HOH . G 7 HOH AAA 68 868 33 HOH HOH . G 7 HOH AAA 69 869 68 HOH HOH . G 7 HOH AAA 70 870 81 HOH HOH . G 7 HOH AAA 71 871 77 HOH HOH . G 7 HOH AAA 72 872 29 HOH HOH . G 7 HOH AAA 73 873 4 HOH HOH . G 7 HOH AAA 74 874 63 HOH HOH . G 7 HOH AAA 75 875 54 HOH HOH . G 7 HOH AAA 76 876 187 HOH HOH . G 7 HOH AAA 77 877 8 HOH HOH . G 7 HOH AAA 78 878 35 HOH HOH . G 7 HOH AAA 79 879 132 HOH HOH . G 7 HOH AAA 80 880 25 HOH HOH . G 7 HOH AAA 81 881 44 HOH HOH . G 7 HOH AAA 82 882 111 HOH HOH . G 7 HOH AAA 83 883 66 HOH HOH . G 7 HOH AAA 84 884 9 HOH HOH . G 7 HOH AAA 85 885 49 HOH HOH . G 7 HOH AAA 86 886 43 HOH HOH . G 7 HOH AAA 87 887 101 HOH HOH . G 7 HOH AAA 88 888 14 HOH HOH . G 7 HOH AAA 89 889 38 HOH HOH . G 7 HOH AAA 90 890 80 HOH HOH . G 7 HOH AAA 91 891 180 HOH HOH . G 7 HOH AAA 92 892 16 HOH HOH . G 7 HOH AAA 93 893 89 HOH HOH . G 7 HOH AAA 94 894 118 HOH HOH . G 7 HOH AAA 95 895 108 HOH HOH . G 7 HOH AAA 96 896 214 HOH HOH . G 7 HOH AAA 97 897 222 HOH HOH . G 7 HOH AAA 98 898 84 HOH HOH . G 7 HOH AAA 99 899 51 HOH HOH . G 7 HOH AAA 100 900 156 HOH HOH . G 7 HOH AAA 101 901 95 HOH HOH . G 7 HOH AAA 102 902 104 HOH HOH . G 7 HOH AAA 103 903 92 HOH HOH . G 7 HOH AAA 104 904 149 HOH HOH . G 7 HOH AAA 105 905 97 HOH HOH . G 7 HOH AAA 106 906 216 HOH HOH . G 7 HOH AAA 107 907 27 HOH HOH . G 7 HOH AAA 108 908 228 HOH HOH . G 7 HOH AAA 109 909 78 HOH HOH . G 7 HOH AAA 110 910 30 HOH HOH . G 7 HOH AAA 111 911 82 HOH HOH . G 7 HOH AAA 112 912 107 HOH HOH . G 7 HOH AAA 113 913 99 HOH HOH . G 7 HOH AAA 114 914 181 HOH HOH . G 7 HOH AAA 115 915 53 HOH HOH . G 7 HOH AAA 116 916 37 HOH HOH . G 7 HOH AAA 117 917 65 HOH HOH . G 7 HOH AAA 118 918 225 HOH HOH . G 7 HOH AAA 119 919 157 HOH HOH . G 7 HOH AAA 120 920 5 HOH HOH . G 7 HOH AAA 121 921 23 HOH HOH . G 7 HOH AAA 122 922 219 HOH HOH . G 7 HOH AAA 123 923 87 HOH HOH . G 7 HOH AAA 124 924 171 HOH HOH . G 7 HOH AAA 125 925 215 HOH HOH . G 7 HOH AAA 126 926 188 HOH HOH . G 7 HOH AAA 127 927 50 HOH HOH . G 7 HOH AAA 128 928 163 HOH HOH . G 7 HOH AAA 129 929 26 HOH HOH . G 7 HOH AAA 130 930 173 HOH HOH . G 7 HOH AAA 131 931 94 HOH HOH . G 7 HOH AAA 132 932 117 HOH HOH . G 7 HOH AAA 133 933 227 HOH HOH . G 7 HOH AAA 134 934 85 HOH HOH . G 7 HOH AAA 135 935 17 HOH HOH . G 7 HOH AAA 136 936 198 HOH HOH . G 7 HOH AAA 137 937 48 HOH HOH . G 7 HOH AAA 138 938 129 HOH HOH . G 7 HOH AAA 139 939 39 HOH HOH . G 7 HOH AAA 140 940 205 HOH HOH . G 7 HOH AAA 141 941 193 HOH HOH . G 7 HOH AAA 142 942 204 HOH HOH . G 7 HOH AAA 143 943 20 HOH HOH . G 7 HOH AAA 144 944 47 HOH HOH . G 7 HOH AAA 145 945 22 HOH HOH . G 7 HOH AAA 146 946 226 HOH HOH . G 7 HOH AAA 147 947 90 HOH HOH . G 7 HOH AAA 148 948 210 HOH HOH . G 7 HOH AAA 149 949 154 HOH HOH . G 7 HOH AAA 150 950 57 HOH HOH . G 7 HOH AAA 151 951 79 HOH HOH . G 7 HOH AAA 152 952 213 HOH HOH . G 7 HOH AAA 153 953 6 HOH HOH . G 7 HOH AAA 154 954 93 HOH HOH . G 7 HOH AAA 155 955 229 HOH HOH . G 7 HOH AAA 156 956 28 HOH HOH . G 7 HOH AAA 157 957 102 HOH HOH . G 7 HOH AAA 158 958 70 HOH HOH . G 7 HOH AAA 159 959 176 HOH HOH . G 7 HOH AAA 160 960 18 HOH HOH . G 7 HOH AAA 161 961 40 HOH HOH . G 7 HOH AAA 162 962 86 HOH HOH . G 7 HOH AAA 163 963 174 HOH HOH . G 7 HOH AAA 164 964 199 HOH HOH . G 7 HOH AAA 165 965 232 HOH HOH . G 7 HOH AAA 166 966 113 HOH HOH . G 7 HOH AAA 167 967 182 HOH HOH . G 7 HOH AAA 168 968 64 HOH HOH . G 7 HOH AAA 169 969 46 HOH HOH . G 7 HOH AAA 170 970 125 HOH HOH . G 7 HOH AAA 171 971 177 HOH HOH . G 7 HOH AAA 172 972 74 HOH HOH . G 7 HOH AAA 173 973 45 HOH HOH . G 7 HOH AAA 174 974 200 HOH HOH . G 7 HOH AAA 175 975 233 HOH HOH . G 7 HOH AAA 176 976 160 HOH HOH . G 7 HOH AAA 177 977 224 HOH HOH . G 7 HOH AAA 178 978 133 HOH HOH . G 7 HOH AAA 179 979 21 HOH HOH . G 7 HOH AAA 180 980 55 HOH HOH . G 7 HOH AAA 181 981 110 HOH HOH . G 7 HOH AAA 182 982 116 HOH HOH . G 7 HOH AAA 183 983 103 HOH HOH . G 7 HOH AAA 184 984 91 HOH HOH . G 7 HOH AAA 185 985 185 HOH HOH . G 7 HOH AAA 186 986 221 HOH HOH . G 7 HOH AAA 187 987 152 HOH HOH . G 7 HOH AAA 188 988 124 HOH HOH . G 7 HOH AAA 189 989 127 HOH HOH . G 7 HOH AAA 190 990 73 HOH HOH . G 7 HOH AAA 191 991 62 HOH HOH . G 7 HOH AAA 192 992 128 HOH HOH . G 7 HOH AAA 193 993 189 HOH HOH . G 7 HOH AAA 194 994 206 HOH HOH . G 7 HOH AAA 195 995 217 HOH HOH . G 7 HOH AAA 196 996 150 HOH HOH . G 7 HOH AAA 197 997 139 HOH HOH . G 7 HOH AAA 198 998 144 HOH HOH . G 7 HOH AAA 199 999 96 HOH HOH . G 7 HOH AAA 200 1000 109 HOH HOH . G 7 HOH AAA 201 1001 197 HOH HOH . G 7 HOH AAA 202 1002 166 HOH HOH . G 7 HOH AAA 203 1003 146 HOH HOH . G 7 HOH AAA 204 1004 196 HOH HOH . G 7 HOH AAA 205 1005 138 HOH HOH . G 7 HOH AAA 206 1006 175 HOH HOH . G 7 HOH AAA 207 1007 158 HOH HOH . G 7 HOH AAA 208 1008 130 HOH HOH . G 7 HOH AAA 209 1009 168 HOH HOH . G 7 HOH AAA 210 1010 179 HOH HOH . G 7 HOH AAA 211 1011 192 HOH HOH . G 7 HOH AAA 212 1012 201 HOH HOH . G 7 HOH AAA 213 1013 165 HOH HOH . G 7 HOH AAA 214 1014 151 HOH HOH . G 7 HOH AAA 215 1015 191 HOH HOH . G 7 HOH AAA 216 1016 170 HOH HOH . G 7 HOH AAA 217 1017 195 HOH HOH . G 7 HOH AAA 218 1018 230 HOH HOH . G 7 HOH AAA 219 1019 106 HOH HOH . G 7 HOH AAA 220 1020 161 HOH HOH . G 7 HOH AAA 221 1021 100 HOH HOH . G 7 HOH AAA 222 1022 140 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 6 _atom_site.Cartn_x -17.658 _atom_site.Cartn_y 14.389 _atom_site.Cartn_z 34.263 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 27.93 _atom_site.pdbx_formal_charge 0 _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 704 _atom_site.auth_asym_id AAA _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 359 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #