data_7PKM # _model_server_result.job_id 5uOCzCwS5517dg0RcOXWUA _model_server_result.datetime_utc '2024-11-12 20:36:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7pkm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 7PKM # _exptl.entry_id 7PKM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.35 _cell.angle_gamma 90 _cell.entry_id 7PKM _cell.length_a 35.531 _cell.length_b 66.81 _cell.length_c 62.691 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PKM _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 91 A HIS 78 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc2 A NE2 HIS 250 A HIS 237 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc3 A OD1 ASP 254 A ASP 241 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc4 B ZN ZN . A ZN 501 1_555 C N29 6G8 . A 6G8 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc5 B ZN ZN . A ZN 501 1_555 C O27 6G8 . A 6G8 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7PKM _atom_sites.fract_transf_matrix[1][1] 0.028144 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000172 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014968 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015952 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 501 501 ZN ZN . C 3 6G8 A 1 502 1 6G8 815 . D 4 HOH A 1 601 22 HOH HOH . D 4 HOH A 2 602 26 HOH HOH . D 4 HOH A 3 603 141 HOH HOH . D 4 HOH A 4 604 69 HOH HOH . D 4 HOH A 5 605 202 HOH HOH . D 4 HOH A 6 606 246 HOH HOH . D 4 HOH A 7 607 220 HOH HOH . D 4 HOH A 8 608 287 HOH HOH . D 4 HOH A 9 609 181 HOH HOH . D 4 HOH A 10 610 227 HOH HOH . D 4 HOH A 11 611 140 HOH HOH . D 4 HOH A 12 612 144 HOH HOH . D 4 HOH A 13 613 82 HOH HOH . D 4 HOH A 14 614 58 HOH HOH . D 4 HOH A 15 615 119 HOH HOH . D 4 HOH A 16 616 193 HOH HOH . D 4 HOH A 17 617 108 HOH HOH . D 4 HOH A 18 618 107 HOH HOH . D 4 HOH A 19 619 1 HOH HOH . D 4 HOH A 20 620 271 HOH HOH . D 4 HOH A 21 621 182 HOH HOH . D 4 HOH A 22 622 147 HOH HOH . D 4 HOH A 23 623 206 HOH HOH . D 4 HOH A 24 624 240 HOH HOH . D 4 HOH A 25 625 111 HOH HOH . D 4 HOH A 26 626 167 HOH HOH . D 4 HOH A 27 627 50 HOH HOH . D 4 HOH A 28 628 106 HOH HOH . D 4 HOH A 29 629 109 HOH HOH . D 4 HOH A 30 630 32 HOH HOH . D 4 HOH A 31 631 137 HOH HOH . D 4 HOH A 32 632 76 HOH HOH . D 4 HOH A 33 633 164 HOH HOH . D 4 HOH A 34 634 153 HOH HOH . D 4 HOH A 35 635 123 HOH HOH . D 4 HOH A 36 636 136 HOH HOH . D 4 HOH A 37 637 15 HOH HOH . D 4 HOH A 38 638 6 HOH HOH . D 4 HOH A 39 639 93 HOH HOH . D 4 HOH A 40 640 63 HOH HOH . D 4 HOH A 41 641 67 HOH HOH . D 4 HOH A 42 642 276 HOH HOH . D 4 HOH A 43 643 83 HOH HOH . D 4 HOH A 44 644 97 HOH HOH . D 4 HOH A 45 645 110 HOH HOH . D 4 HOH A 46 646 81 HOH HOH . D 4 HOH A 47 647 234 HOH HOH . D 4 HOH A 48 648 79 HOH HOH . D 4 HOH A 49 649 87 HOH HOH . D 4 HOH A 50 650 56 HOH HOH . D 4 HOH A 51 651 21 HOH HOH . D 4 HOH A 52 652 10 HOH HOH . D 4 HOH A 53 653 72 HOH HOH . D 4 HOH A 54 654 51 HOH HOH . D 4 HOH A 55 655 31 HOH HOH . D 4 HOH A 56 656 23 HOH HOH . D 4 HOH A 57 657 286 HOH HOH . D 4 HOH A 58 658 28 HOH HOH . D 4 HOH A 59 659 209 HOH HOH . D 4 HOH A 60 660 207 HOH HOH . D 4 HOH A 61 661 46 HOH HOH . D 4 HOH A 62 662 156 HOH HOH . D 4 HOH A 63 663 274 HOH HOH . D 4 HOH A 64 664 52 HOH HOH . D 4 HOH A 65 665 5 HOH HOH . D 4 HOH A 66 666 272 HOH HOH . D 4 HOH A 67 667 84 HOH HOH . D 4 HOH A 68 668 125 HOH HOH . D 4 HOH A 69 669 284 HOH HOH . D 4 HOH A 70 670 34 HOH HOH . D 4 HOH A 71 671 105 HOH HOH . D 4 HOH A 72 672 260 HOH HOH . D 4 HOH A 73 673 152 HOH HOH . D 4 HOH A 74 674 17 HOH HOH . D 4 HOH A 75 675 222 HOH HOH . D 4 HOH A 76 676 89 HOH HOH . D 4 HOH A 77 677 172 HOH HOH . D 4 HOH A 78 678 12 HOH HOH . D 4 HOH A 79 679 126 HOH HOH . D 4 HOH A 80 680 157 HOH HOH . D 4 HOH A 81 681 39 HOH HOH . D 4 HOH A 82 682 41 HOH HOH . D 4 HOH A 83 683 223 HOH HOH . D 4 HOH A 84 684 54 HOH HOH . D 4 HOH A 85 685 30 HOH HOH . D 4 HOH A 86 686 183 HOH HOH . D 4 HOH A 87 687 121 HOH HOH . D 4 HOH A 88 688 205 HOH HOH . D 4 HOH A 89 689 2 HOH HOH . D 4 HOH A 90 690 122 HOH HOH . D 4 HOH A 91 691 25 HOH HOH . D 4 HOH A 92 692 35 HOH HOH . D 4 HOH A 93 693 114 HOH HOH . D 4 HOH A 94 694 262 HOH HOH . D 4 HOH A 95 695 243 HOH HOH . D 4 HOH A 96 696 278 HOH HOH . D 4 HOH A 97 697 47 HOH HOH . D 4 HOH A 98 698 174 HOH HOH . D 4 HOH A 99 699 165 HOH HOH . D 4 HOH A 100 700 283 HOH HOH . D 4 HOH A 101 701 149 HOH HOH . D 4 HOH A 102 702 277 HOH HOH . D 4 HOH A 103 703 275 HOH HOH . D 4 HOH A 104 704 64 HOH HOH . D 4 HOH A 105 705 73 HOH HOH . D 4 HOH A 106 706 85 HOH HOH . D 4 HOH A 107 707 161 HOH HOH . D 4 HOH A 108 708 100 HOH HOH . D 4 HOH A 109 709 90 HOH HOH . D 4 HOH A 110 710 184 HOH HOH . D 4 HOH A 111 711 112 HOH HOH . D 4 HOH A 112 712 150 HOH HOH . D 4 HOH A 113 713 120 HOH HOH . D 4 HOH A 114 714 233 HOH HOH . D 4 HOH A 115 715 4 HOH HOH . D 4 HOH A 116 716 16 HOH HOH . D 4 HOH A 117 717 197 HOH HOH . D 4 HOH A 118 718 40 HOH HOH . D 4 HOH A 119 719 128 HOH HOH . D 4 HOH A 120 720 281 HOH HOH . D 4 HOH A 121 721 139 HOH HOH . D 4 HOH A 122 722 242 HOH HOH . D 4 HOH A 123 723 95 HOH HOH . D 4 HOH A 124 724 37 HOH HOH . D 4 HOH A 125 725 96 HOH HOH . D 4 HOH A 126 726 116 HOH HOH . D 4 HOH A 127 727 71 HOH HOH . D 4 HOH A 128 728 68 HOH HOH . D 4 HOH A 129 729 285 HOH HOH . D 4 HOH A 130 730 42 HOH HOH . D 4 HOH A 131 731 27 HOH HOH . D 4 HOH A 132 732 148 HOH HOH . D 4 HOH A 133 733 43 HOH HOH . D 4 HOH A 134 734 217 HOH HOH . D 4 HOH A 135 735 57 HOH HOH . D 4 HOH A 136 736 154 HOH HOH . D 4 HOH A 137 737 59 HOH HOH . D 4 HOH A 138 738 130 HOH HOH . D 4 HOH A 139 739 48 HOH HOH . D 4 HOH A 140 740 168 HOH HOH . D 4 HOH A 141 741 66 HOH HOH . D 4 HOH A 142 742 228 HOH HOH . D 4 HOH A 143 743 256 HOH HOH . D 4 HOH A 144 744 55 HOH HOH . D 4 HOH A 145 745 20 HOH HOH . D 4 HOH A 146 746 104 HOH HOH . D 4 HOH A 147 747 91 HOH HOH . D 4 HOH A 148 748 248 HOH HOH . D 4 HOH A 149 749 231 HOH HOH . D 4 HOH A 150 750 185 HOH HOH . D 4 HOH A 151 751 158 HOH HOH . D 4 HOH A 152 752 24 HOH HOH . D 4 HOH A 153 753 101 HOH HOH . D 4 HOH A 154 754 190 HOH HOH . D 4 HOH A 155 755 29 HOH HOH . D 4 HOH A 156 756 8 HOH HOH . D 4 HOH A 157 757 13 HOH HOH . D 4 HOH A 158 758 9 HOH HOH . D 4 HOH A 159 759 45 HOH HOH . D 4 HOH A 160 760 33 HOH HOH . D 4 HOH A 161 761 44 HOH HOH . D 4 HOH A 162 762 166 HOH HOH . D 4 HOH A 163 763 145 HOH HOH . D 4 HOH A 164 764 131 HOH HOH . D 4 HOH A 165 765 160 HOH HOH . D 4 HOH A 166 766 135 HOH HOH . D 4 HOH A 167 767 99 HOH HOH . D 4 HOH A 168 768 170 HOH HOH . D 4 HOH A 169 769 74 HOH HOH . D 4 HOH A 170 770 225 HOH HOH . D 4 HOH A 171 771 146 HOH HOH . D 4 HOH A 172 772 232 HOH HOH . D 4 HOH A 173 773 244 HOH HOH . D 4 HOH A 174 774 155 HOH HOH . D 4 HOH A 175 775 263 HOH HOH . D 4 HOH A 176 776 201 HOH HOH . D 4 HOH A 177 777 258 HOH HOH . D 4 HOH A 178 778 115 HOH HOH . D 4 HOH A 179 779 238 HOH HOH . D 4 HOH A 180 780 249 HOH HOH . D 4 HOH A 181 781 282 HOH HOH . D 4 HOH A 182 782 113 HOH HOH . D 4 HOH A 183 783 143 HOH HOH . D 4 HOH A 184 784 60 HOH HOH . D 4 HOH A 185 785 221 HOH HOH . D 4 HOH A 186 786 103 HOH HOH . D 4 HOH A 187 787 237 HOH HOH . D 4 HOH A 188 788 196 HOH HOH . D 4 HOH A 189 789 189 HOH HOH . D 4 HOH A 190 790 3 HOH HOH . D 4 HOH A 191 791 191 HOH HOH . D 4 HOH A 192 792 224 HOH HOH . D 4 HOH A 193 793 273 HOH HOH . D 4 HOH A 194 794 19 HOH HOH . D 4 HOH A 195 795 70 HOH HOH . D 4 HOH A 196 796 151 HOH HOH . D 4 HOH A 197 797 204 HOH HOH . D 4 HOH A 198 798 142 HOH HOH . D 4 HOH A 199 799 255 HOH HOH . D 4 HOH A 200 800 171 HOH HOH . D 4 HOH A 201 801 173 HOH HOH . D 4 HOH A 202 802 80 HOH HOH . D 4 HOH A 203 803 179 HOH HOH . D 4 HOH A 204 804 159 HOH HOH . D 4 HOH A 205 805 163 HOH HOH . D 4 HOH A 206 806 216 HOH HOH . D 4 HOH A 207 807 195 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -5.479 _atom_site.Cartn_y 15.658 _atom_site.Cartn_z -11.911 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 20.2 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #