data_7PLZ # _model_server_result.job_id wWY76qu-osVYa24-mmqOcQ _model_server_result.datetime_utc '2024-11-12 21:14:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7plz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":401}' # _entry.id 7PLZ # _exptl.entry_id 7PLZ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 709.67 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Jasplakinolide _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7PLZ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PLZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details heptameric _pdbx_struct_assembly.oligomeric_count 7 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 K N N ? 7 L N N ? 7 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C GLU 74 C GLU 72 1_555 B N HIC 75 C HIC 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 B C HIC 75 C HIC 73 1_555 B N GLY 76 C GLY 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 E C GLU 74 F GLU 72 1_555 E N HIC 75 F HIC 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 E C HIC 75 F HIC 73 1_555 E N GLY 76 F GLY 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale5 G C GLU 74 G GLU 72 1_555 G N HIC 75 G HIC 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 G C HIC 75 G HIC 73 1_555 G N GLY 76 G GLY 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? metalc ? metalc1 H O2B ADP . C ADP 401 1_555 J MG MG . C MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.978 ? metalc ? metalc2 I O3 PO4 . C PO4 402 1_555 J MG MG . C MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.712 ? metalc ? metalc3 M O3B ADP . F ADP 401 1_555 O MG MG . F MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? metalc ? metalc4 N O3 PO4 . F PO4 402 1_555 O MG MG . F MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc5 Q O2B ADP . G ADP 402 1_555 S MG MG . G MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.994 ? metalc ? metalc6 Q O3B ADP . G ADP 402 1_555 S MG MG . G MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? # _chem_comp.formula 'C36 H45 Br N4 O6' _chem_comp.formula_weight 709.67 _chem_comp.id 9UE _chem_comp.mon_nstd_flag . _chem_comp.name Jasplakinolide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7PLZ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code H 4 ADP C 1 401 401 ADP ADP . I 5 PO4 C 1 402 402 PO4 PO4 . J 6 MG C 1 403 403 MG MG . K 7 9UE C 1 404 404 9UE 9UE . L 7 9UE C 1 405 404 9UE 9UE . M 4 ADP F 1 401 401 ADP ADP . N 5 PO4 F 1 402 402 PO4 PO4 . O 6 MG F 1 403 403 MG MG . P 7 9UE G 1 401 404 9UE 9UE . Q 4 ADP G 1 402 401 ADP ADP . R 5 PO4 G 1 403 402 PO4 PO4 . S 6 MG G 1 404 403 MG MG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C35 9UE . . . P 7 164.76 161.563 175.934 1 30.7 ? C35 9UE 401 G 1 HETATM 2 C C34 9UE . . . P 7 171.945 159.811 175.328 1 30.7 ? C34 9UE 401 G 1 HETATM 3 C C33 9UE . . . P 7 172.664 158.705 175.735 1 30.7 ? C33 9UE 401 G 1 HETATM 4 C C32 9UE . . . P 7 172.276 158.009 176.864 1 30.7 ? C32 9UE 401 G 1 HETATM 5 C C31 9UE . . . P 7 171.166 158.426 177.577 1 30.7 ? C31 9UE 401 G 1 HETATM 6 C C30 9UE . . . P 7 170.458 159.535 177.158 1 30.7 ? C30 9UE 401 G 1 HETATM 7 C C29 9UE . . . P 7 170.827 160.247 176.025 1 30.7 ? C29 9UE 401 G 1 HETATM 8 C C28 9UE . . . P 7 174.337 166.721 177.012 1 30.7 ? C28 9UE 401 G 1 HETATM 9 C C27 9UE . . . P 7 174.653 166.04 179.081 1 30.7 ? C27 9UE 401 G 1 HETATM 10 C C26 9UE . . . P 7 175.025 165.908 180.403 1 30.7 ? C26 9UE 401 G 1 HETATM 11 C C25 9UE . . . P 7 174.597 164.784 181.082 1 30.7 ? C25 9UE 401 G 1 HETATM 12 C C24 9UE . . . P 7 173.817 163.824 180.459 1 30.7 ? C24 9UE 401 G 1 HETATM 13 O O2 9UE . . . P 7 170.281 163.942 174.368 1 30.7 ? O2 9UE 401 G 1 HETATM 14 C C1 9UE . . . P 7 166.378 165.102 176.054 1 30.7 ? C1 9UE 401 G 1 HETATM 15 O O1 9UE . . . P 7 167.458 160.13 177.084 1 30.7 ? O1 9UE 401 G 1 HETATM 16 C C2 9UE . . . P 7 165.354 163.978 176.275 1 30.7 ? C2 9UE 401 G 1 HETATM 17 C C3 9UE . . . P 7 165.831 162.62 175.83 1 30.7 ? C3 9UE 401 G 1 HETATM 18 O O3 9UE . . . P 7 169.633 166.413 177.656 1 30.7 ? O3 9UE 401 G 1 HETATM 19 C C4 9UE . . . P 7 167.594 161.159 176.486 1 30.7 ? C4 9UE 401 G 1 HETATM 20 C C5 9UE . . . P 7 168.536 161.359 175.341 1 30.7 ? C5 9UE 401 G 1 HETATM 21 O O4 9UE . . . P 7 167.415 170.37 176.576 1 30.7 ? O4 9UE 401 G 1 HETATM 22 C C6 9UE . . . P 7 170.085 161.48 175.522 1 30.7 ? C6 9UE 401 G 1 HETATM 23 C C23 9UE . . . P 7 173.449 163.963 179.137 1 30.7 ? C23 9UE 401 G 1 HETATM 24 C C22 9UE . . . P 7 173.864 165.082 178.435 1 30.7 ? C22 9UE 401 G 1 HETATM 25 C C21 9UE . . . P 7 173.687 165.518 177.094 1 30.7 ? C21 9UE 401 G 1 HETATM 26 C C20 9UE . . . P 7 172.87 164.753 176.098 1 30.7 ? C20 9UE 401 G 1 HETATM 27 C C19 9UE . . . P 7 171.512 166.903 174.622 1 30.7 ? C19 9UE 401 G 1 HETATM 28 C C18 9UE . . . P 7 170.606 169.419 176.772 1 30.7 ? C18 9UE 401 G 1 HETATM 29 C C17 9UE . . . P 7 165.429 170.633 178.255 1 30.7 ? C17 9UE 401 G 1 HETATM 30 N N3 9UE . . . P 7 174.938 167.044 178.183 1 30.7 ? N3 9UE 401 G 1 HETATM 31 C C16 9UE . . . P 7 164.558 167.845 176.329 1 30.7 ? C16 9UE 401 G 1 HETATM 32 C C15 9UE . . . P 7 166.235 166.153 177.133 1 30.7 ? C15 9UE 401 G 1 HETATM 33 N N2 9UE . . . P 7 168.415 168.507 177.375 1 30.7 ? N2 9UE 401 G 1 HETATM 34 C C14 9UE . . . P 7 165.54 167.275 177.315 1 30.7 ? C14 9UE 401 G 1 HETATM 35 C C13 9UE . . . P 7 165.715 168.078 178.577 1 30.7 ? C13 9UE 401 G 1 HETATM 36 C C12 9UE . . . P 7 166.388 169.455 178.447 1 30.7 ? C12 9UE 401 G 1 HETATM 37 N N1 9UE . . . P 7 170.946 166.369 175.86 1 30.7 ? N1 9UE 401 G 1 HETATM 38 C C11 9UE . . . P 7 167.473 169.455 177.388 1 30.7 ? C11 9UE 401 G 1 HETATM 39 C C10 9UE . . . P 7 169.517 168.398 176.433 1 30.7 ? C10 9UE 401 G 1 HETATM 40 C C9 9UE . . . P 7 170.026 166.97 176.654 1 30.7 ? C9 9UE 401 G 1 HETATM 41 C C8 9UE . . . P 7 171.354 164.994 176.22 1 30.7 ? C8 9UE 401 G 1 HETATM 42 C C7 9UE . . . P 7 170.678 163.82 175.521 1 30.7 ? C7 9UE 401 G 1 HETATM 43 O O5 9UE . . . P 7 173.001 156.92 177.243 1 30.7 ? O5 9UE 401 G 1 HETATM 44 BR BR 9UE . . . P 7 174.544 167.886 175.576 1 30.7 ? BR 9UE 401 G 1 HETATM 45 N N 9UE . . . P 7 170.62 162.665 176.193 1 30.7 ? N 9UE 401 G 1 HETATM 46 O O 9UE . . . P 7 166.918 162.278 176.753 1 30.7 ? O 9UE 401 G 1 HETATM 47 C C 9UE . . . P 7 166.397 165.621 174.613 1 30.7 ? C 9UE 401 G 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 37 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 47 #