data_7PLZ # _model_server_result.job_id Z8EbG45KWItwOd11RgJQOw _model_server_result.datetime_utc '2024-11-12 21:10:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7plz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":405}' # _entry.id 7PLZ # _exptl.entry_id 7PLZ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 709.67 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Jasplakinolide _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7PLZ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PLZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details heptameric _pdbx_struct_assembly.oligomeric_count 7 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 K N N ? 7 L N N ? 7 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C GLU 74 C GLU 72 1_555 B N HIC 75 C HIC 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 B C HIC 75 C HIC 73 1_555 B N GLY 76 C GLY 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 E C GLU 74 F GLU 72 1_555 E N HIC 75 F HIC 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 E C HIC 75 F HIC 73 1_555 E N GLY 76 F GLY 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale5 G C GLU 74 G GLU 72 1_555 G N HIC 75 G HIC 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 G C HIC 75 G HIC 73 1_555 G N GLY 76 G GLY 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? metalc ? metalc1 H O2B ADP . C ADP 401 1_555 J MG MG . C MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.978 ? metalc ? metalc2 I O3 PO4 . C PO4 402 1_555 J MG MG . C MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.712 ? metalc ? metalc3 M O3B ADP . F ADP 401 1_555 O MG MG . F MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? metalc ? metalc4 N O3 PO4 . F PO4 402 1_555 O MG MG . F MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc5 Q O2B ADP . G ADP 402 1_555 S MG MG . G MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.994 ? metalc ? metalc6 Q O3B ADP . G ADP 402 1_555 S MG MG . G MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? # _chem_comp.formula 'C36 H45 Br N4 O6' _chem_comp.formula_weight 709.67 _chem_comp.id 9UE _chem_comp.mon_nstd_flag . _chem_comp.name Jasplakinolide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7PLZ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code H 4 ADP C 1 401 401 ADP ADP . I 5 PO4 C 1 402 402 PO4 PO4 . J 6 MG C 1 403 403 MG MG . K 7 9UE C 1 404 404 9UE 9UE . L 7 9UE C 1 405 404 9UE 9UE . M 4 ADP F 1 401 401 ADP ADP . N 5 PO4 F 1 402 402 PO4 PO4 . O 6 MG F 1 403 403 MG MG . P 7 9UE G 1 401 404 9UE 9UE . Q 4 ADP G 1 402 401 ADP ADP . R 5 PO4 G 1 403 402 PO4 PO4 . S 6 MG G 1 404 403 MG MG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C35 9UE . . . L 7 181.393 189.766 204.654 1 40.82 ? C35 9UE 405 C 1 HETATM 2 C C34 9UE . . . L 7 174.059 189.511 203.747 1 40.82 ? C34 9UE 405 C 1 HETATM 3 C C33 9UE . . . L 7 173.061 190.376 204.144 1 40.82 ? C33 9UE 405 C 1 HETATM 4 C C32 9UE . . . L 7 173.206 191.113 205.302 1 40.82 ? C32 9UE 405 C 1 HETATM 5 C C31 9UE . . . L 7 174.357 190.98 206.058 1 40.82 ? C31 9UE 405 C 1 HETATM 6 C C30 9UE . . . L 7 175.35 190.11 205.648 1 40.82 ? C30 9UE 405 C 1 HETATM 7 C C29 9UE . . . L 7 175.223 189.365 204.484 1 40.82 ? C29 9UE 405 C 1 HETATM 8 C C28 9UE . . . L 7 173.32 182.26 204.899 1 40.82 ? C28 9UE 405 C 1 HETATM 9 C C27 9UE . . . L 7 172.599 182.716 206.932 1 40.82 ? C27 9UE 405 C 1 HETATM 10 C C26 9UE . . . L 7 172.031 182.68 208.193 1 40.82 ? C26 9UE 405 C 1 HETATM 11 C C25 9UE . . . L 7 172.135 183.807 208.989 1 40.82 ? C25 9UE 405 C 1 HETATM 12 C C24 9UE . . . L 7 172.79 184.937 208.528 1 40.82 ? C24 9UE 405 C 1 HETATM 13 O O2 9UE . . . L 7 176.79 186.01 202.75 1 40.82 ? O2 9UE 405 C 1 HETATM 14 C C1 9UE . . . L 7 180.824 185.92 204.454 1 40.82 ? C1 9UE 405 C 1 HETATM 15 O O1 9UE . . . L 7 178.367 190.356 205.693 1 40.82 ? O1 9UE 405 C 1 HETATM 16 C C2 9UE . . . L 7 181.473 187.271 204.784 1 40.82 ? C2 9UE 405 C 1 HETATM 17 C C3 9UE . . . L 7 180.643 188.476 204.433 1 40.82 ? C3 9UE 405 C 1 HETATM 18 O O3 9UE . . . L 7 178.101 183.687 205.913 1 40.82 ? O3 9UE 405 C 1 HETATM 19 C C4 9UE . . . L 7 178.541 189.347 205.065 1 40.82 ? C4 9UE 405 C 1 HETATM 20 C C5 9UE . . . L 7 177.734 188.936 203.872 1 40.82 ? C5 9UE 405 C 1 HETATM 21 O O4 9UE . . . L 7 181.37 180.604 204.551 1 40.82 ? O4 9UE 405 C 1 HETATM 22 C C6 9UE . . . L 7 176.275 188.387 203.982 1 40.82 ? C6 9UE 405 C 1 HETATM 23 C C23 9UE . . . L 7 173.355 184.965 207.268 1 40.82 ? C23 9UE 405 C 1 HETATM 24 C C22 9UE . . . L 7 173.267 183.848 206.452 1 40.82 ? C22 9UE 405 C 1 HETATM 25 C C21 9UE . . . L 7 173.707 183.552 205.13 1 40.82 ? C21 9UE 405 C 1 HETATM 26 C C20 9UE . . . L 7 174.488 184.51 204.283 1 40.82 ? C20 9UE 405 C 1 HETATM 27 C C19 9UE . . . L 7 176.432 182.835 202.834 1 40.82 ? C19 9UE 405 C 1 HETATM 28 C C18 9UE . . . L 7 178.052 180.586 204.819 1 40.82 ? C18 9UE 405 C 1 HETATM 29 C C17 9UE . . . L 7 183.449 180.814 206.136 1 40.82 ? C17 9UE 405 C 1 HETATM 30 N N3 9UE . . . L 7 172.637 181.746 205.953 1 40.82 ? N3 9UE 405 C 1 HETATM 31 C C16 9UE . . . L 7 183.412 183.919 204.569 1 40.82 ? C16 9UE 405 C 1 HETATM 32 C C15 9UE . . . L 7 181.272 184.886 205.462 1 40.82 ? C15 9UE 405 C 1 HETATM 33 N N2 9UE . . . L 7 179.911 182.029 205.522 1 40.82 ? N2 9UE 405 C 1 HETATM 34 C C14 9UE . . . L 7 182.282 184.019 205.557 1 40.82 ? C14 9UE 405 C 1 HETATM 35 C C13 9UE . . . L 7 182.394 183.091 206.742 1 40.82 ? C13 9UE 405 C 1 HETATM 36 C C12 9UE . . . L 7 182.167 181.588 206.501 1 40.82 ? C12 9UE 405 C 1 HETATM 37 N N1 9UE . . . L 7 176.816 183.45 204.104 1 40.82 ? N1 9UE 405 C 1 HETATM 38 C C11 9UE . . . L 7 181.09 181.388 205.448 1 40.82 ? C11 9UE 405 C 1 HETATM 39 C C10 9UE . . . L 7 178.801 181.9 204.58 1 40.82 ? C10 9UE 405 C 1 HETATM 40 C C9 9UE . . . L 7 177.878 183.093 204.88 1 40.82 ? C9 9UE 405 C 1 HETATM 41 C C8 9UE . . . L 7 176.009 184.621 204.523 1 40.82 ? C8 9UE 405 C 1 HETATM 42 C C7 9UE . . . L 7 176.343 185.97 203.891 1 40.82 ? C7 9UE 405 C 1 HETATM 43 O O5 9UE . . . L 7 172.204 191.957 205.67 1 40.82 ? O5 9UE 405 C 1 HETATM 44 BR BR 9UE . . . L 7 173.541 181.194 203.388 1 40.82 ? BR 9UE 405 C 1 HETATM 45 N N 9UE . . . L 7 176.06 187.073 204.598 1 40.82 ? N 9UE 405 C 1 HETATM 46 O O 9UE . . . L 7 179.488 188.448 205.333 1 40.82 ? O 9UE 405 C 1 HETATM 47 C C 9UE . . . L 7 180.943 185.533 202.975 1 40.82 ? C 9UE 405 C 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 47 #