data_7PM1
#
_model_server_result.job_id            9ylVCHfIPFv5em1SGZKsUg 
_model_server_result.datetime_utc      '2024-11-12 21:10:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7pm1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":404}' 
#
_entry.id    7PM1 
#
_exptl.entry_id    7PM1 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              709.67 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            Jasplakinolide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7PM1 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7PM1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      7 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 C C GLU 74 C GLU 72 1_555 C N HIC 75 C HIC 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale2 C C HIC 75 C HIC 73 1_555 C N GLY 76 C GLY 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
metalc ? metalc1 C OE1 GLN 139 C GLN 137 1_555 F MG MG . C MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.997 ? 
metalc ? metalc2 D O3B ADP . C ADP 401 1_555 F MG MG . C MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? 
metalc ? metalc3 E O3 PO4 . C PO4 402 1_555 F MG MG . C MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.952 ? 
#
_chem_comp.formula           'C36 H45 Br N4 O6' 
_chem_comp.formula_weight    709.67 
_chem_comp.id                9UE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              Jasplakinolide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7PM1 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 ADP C 1 401 401 ADP ADP . 
E 5 PO4 C 1 402 402 PO4 PO4 . 
F 6 MG C 1 403 403 MG MG . 
G 7 9UE C 1 404 404 9UE 9UE . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C35 9UE . . . G 7 110.044 196.089 148.138 1 104.6 ? C35 9UE 404 C 1 
HETATM 2 C C34 9UE . . . G 7 117.358 195.089 147.561 1 104.6 ? C34 9UE 404 C 1 
HETATM 3 C C33 9UE . . . G 7 118.138 193.999 147.891 1 104.6 ? C33 9UE 404 C 1 
HETATM 4 C C32 9UE . . . G 7 117.751 193.157 148.918 1 104.6 ? C32 9UE 404 C 1 
HETATM 5 C C31 9UE . . . G 7 116.579 193.413 149.61 1 104.6 ? C31 9UE 404 C 1 
HETATM 6 C C30 9UE . . . G 7 115.809 194.507 149.27 1 104.6 ? C30 9UE 404 C 1 
HETATM 7 C C29 9UE . . . G 7 116.179 195.364 148.242 1 104.6 ? C29 9UE 404 C 1 
HETATM 8 C C28 9UE . . . G 7 119.106 202.183 149.566 1 104.6 ? C28 9UE 404 C 1 
HETATM 9 C C27 9UE . . . G 7 119.457 201.565 151.66 1 104.6 ? C27 9UE 404 C 1 
HETATM 10 C C26 9UE . . . G 7 119.834 201.491 152.99 1 104.6 ? C26 9UE 404 C 1 
HETATM 11 C C25 9UE . . . G 7 119.482 200.361 153.708 1 104.6 ? C25 9UE 404 C 1 
HETATM 12 C C24 9UE . . . G 7 118.77 199.335 153.105 1 104.6 ? C24 9UE 404 C 1 
HETATM 13 O O2 9UE . . . G 7 115.391 199.072 146.759 1 104.6 ? O2 9UE 404 C 1 
HETATM 14 C C1 9UE . . . G 7 111.287 199.8 148.065 1 104.6 ? C1 9UE 404 C 1 
HETATM 15 O O1 9UE . . . G 7 112.842 194.92 149.236 1 104.6 ? O1 9UE 404 C 1 
HETATM 16 C C2 9UE . . . G 7 110.403 198.566 148.308 1 104.6 ? C2 9UE 404 C 1 
HETATM 17 C C3 9UE . . . G 7 111.026 197.227 147.994 1 104.6 ? C3 9UE 404 C 1 
HETATM 18 O O3 9UE . . . G 7 114.201 201.414 149.934 1 104.6 ? O3 9UE 404 C 1 
HETATM 19 C C4 9UE . . . G 7 112.896 195.982 148.678 1 104.6 ? C4 9UE 404 C 1 
HETATM 20 C C5 9UE . . . G 7 113.84 196.321 147.562 1 104.6 ? C5 9UE 404 C 1 
HETATM 21 O O4 9UE . . . G 7 111.665 205.141 148.453 1 104.6 ? O4 9UE 404 C 1 
HETATM 22 C C6 9UE . . . G 7 115.361 196.582 147.825 1 104.6 ? C6 9UE 404 C 1 
HETATM 23 C C23 9UE . . . G 7 118.397 199.418 151.774 1 104.6 ? C23 9UE 404 C 1 
HETATM 24 C C22 9UE . . . G 7 118.736 200.54 151.029 1 104.6 ? C22 9UE 404 C 1 
HETATM 25 C C21 9UE . . . G 7 118.535 200.938 149.67 1 104.6 ? C21 9UE 404 C 1 
HETATM 26 C C20 9UE . . . G 7 117.778 200.123 148.657 1 104.6 ? C20 9UE 404 C 1 
HETATM 27 C C19 9UE . . . G 7 116.293 202.122 147.071 1 104.6 ? C19 9UE 404 C 1 
HETATM 28 C C18 9UE . . . G 7 114.88 204.543 149.013 1 104.6 ? C18 9UE 404 C 1 
HETATM 29 C C17 9UE . . . G 7 109.469 205.252 149.901 1 104.6 ? C17 9UE 404 C 1 
HETATM 30 N N3 9UE . . . G 7 119.68 202.565 150.737 1 104.6 ? N3 9UE 404 C 1 
HETATM 31 C C16 9UE . . . G 7 109.052 202.269 148.112 1 104.6 ? C16 9UE 404 C 1 
HETATM 32 C C15 9UE . . . G 7 110.924 200.869 149.075 1 104.6 ? C15 9UE 404 C 1 
HETATM 33 N N2 9UE . . . G 7 112.747 203.421 149.469 1 104.6 ? N2 9UE 404 C 1 
HETATM 34 C C14 9UE . . . G 7 110.069 201.896 149.156 1 104.6 ? C14 9UE 404 C 1 
HETATM 35 C C13 9UE . . . G 7 110.026 202.76 150.396 1 104.6 ? C13 9UE 404 C 1 
HETATM 36 C C12 9UE . . . G 7 110.533 204.211 150.276 1 104.6 ? C12 9UE 404 C 1 
HETATM 37 N N1 9UE . . . G 7 115.68 201.521 148.26 1 104.6 ? N1 9UE 404 C 1 
HETATM 38 C C11 9UE . . . G 7 111.718 204.277 149.323 1 104.6 ? C11 9UE 404 C 1 
HETATM 39 C C10 9UE . . . G 7 113.956 203.373 148.651 1 104.6 ? C10 9UE 404 C 1 
HETATM 40 C C9 9UE . . . G 7 114.621 202.017 148.965 1 104.6 ? C9 9UE 404 C 1 
HETATM 41 C C8 9UE . . . G 7 116.234 200.211 148.677 1 104.6 ? C8 9UE 404 C 1 
HETATM 42 C C7 9UE . . . G 7 115.736 198.968 147.932 1 104.6 ? C7 9UE 404 C 1 
HETATM 43 O O5 9UE . . . G 7 118.538 192.089 149.226 1 104.6 ? O5 9UE 404 C 1 
HETATM 44 BR BR 9UE . . . G 7 119.249 203.326 148.098 1 104.6 ? BR 9UE 404 C 1 
HETATM 45 N N 9UE . . . G 7 115.754 197.788 148.571 1 104.6 ? N 9UE 404 C 1 
HETATM 46 O O 9UE . . . G 7 112.102 197.014 148.968 1 104.6 ? O 9UE 404 C 1 
HETATM 47 C C 9UE . . . G 7 111.299 200.25 146.598 1 104.6 ? C 9UE 404 C 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           267 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           47 
#