data_7PN6 # _model_server_result.job_id E6yb1-xrnYkPpRznsL2OSg _model_server_result.datetime_utc '2024-11-06 12:38:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7pn6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":409}' # _entry.id 7PN6 # _exptl.entry_id 7PN6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.46 _cell.angle_gamma 90 _cell.entry_id 7PN6 _cell.length_a 51.205 _cell.length_b 57.908 _cell.length_c 61.121 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PN6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id J _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 278 A CYS 278 1_555 A SG CYS 319 A CYS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? covale ? covale1 A ND2 ASN 11 A ASN 11 1_555 E C1 NAG . A NAG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale2 A ND2 ASN 141 A ASN 141 1_555 G C1 NAG . A NAG 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale3 A ND2 ASN 161 A ASN 161 1_555 H C1 NAG . A NAG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.472 ? covale ? covale4 A ND2 ASN 182 A ASN 182 1_555 I C1 NAG . A NAG 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.427 ? covale ? covale5 A ND2 ASN 286 A ASN 286 1_555 F C1 NAG . A NAG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.431 ? metalc ? metalc1 A SG CYS 36 A CYS 36 1_555 K FE HEM . A HEM 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc2 A OE2 GLU 122 A GLU 122 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc3 A O GLY 123 A GLY 123 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc4 A OG SER 126 A SER 126 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? metalc ? metalc5 C MG MG . A MG 402 1_555 K O2A HEM . A HEM 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc6 C MG MG . A MG 402 1_555 L O HOH . A HOH 554 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc7 C MG MG . A MG 402 1_555 L O HOH . A HOH 593 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 415 n n P O2 PO4 sing 416 n n P O3 PO4 sing 417 n n P O4 PO4 sing 418 n n # _atom_sites.entry_id 7PN6 _atom_sites.fract_transf_matrix[1][1] 0.019529 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006901 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017269 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017352 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MYR A 1 401 401 MYR MYR . C 3 MG A 1 402 1001 MG MG . D 4 CL A 1 403 1002 CL CL . E 5 NAG A 1 404 1003 NAG NAG . F 5 NAG A 1 405 1004 NAG NAG . G 5 NAG A 1 406 1005 NAG NAG . H 5 NAG A 1 407 1006 NAG NAG . I 5 NAG A 1 408 1007 NAG NAG . J 6 PO4 A 1 409 1008 PO4 PO4 . K 7 HEM A 1 410 1010 HEM HEM . L 8 HOH A 1 501 205 HOH HOH . L 8 HOH A 2 502 123 HOH HOH . L 8 HOH A 3 503 151 HOH HOH . L 8 HOH A 4 504 188 HOH HOH . L 8 HOH A 5 505 172 HOH HOH . L 8 HOH A 6 506 41 HOH HOH . L 8 HOH A 7 507 189 HOH HOH . L 8 HOH A 8 508 220 HOH HOH . L 8 HOH A 9 509 121 HOH HOH . L 8 HOH A 10 510 90 HOH HOH . L 8 HOH A 11 511 81 HOH HOH . L 8 HOH A 12 512 26 HOH HOH . L 8 HOH A 13 513 11 HOH HOH . L 8 HOH A 14 514 136 HOH HOH . L 8 HOH A 15 515 54 HOH HOH . L 8 HOH A 16 516 62 HOH HOH . L 8 HOH A 17 517 126 HOH HOH . L 8 HOH A 18 518 99 HOH HOH . L 8 HOH A 19 519 164 HOH HOH . L 8 HOH A 20 520 167 HOH HOH . L 8 HOH A 21 521 116 HOH HOH . L 8 HOH A 22 522 79 HOH HOH . L 8 HOH A 23 523 33 HOH HOH . L 8 HOH A 24 524 162 HOH HOH . L 8 HOH A 25 525 128 HOH HOH . L 8 HOH A 26 526 142 HOH HOH . L 8 HOH A 27 527 209 HOH HOH . L 8 HOH A 28 528 148 HOH HOH . L 8 HOH A 29 529 31 HOH HOH . L 8 HOH A 30 530 169 HOH HOH . L 8 HOH A 31 531 15 HOH HOH . L 8 HOH A 32 532 131 HOH HOH . L 8 HOH A 33 533 120 HOH HOH . L 8 HOH A 34 534 51 HOH HOH . L 8 HOH A 35 535 181 HOH HOH . L 8 HOH A 36 536 187 HOH HOH . L 8 HOH A 37 537 43 HOH HOH . L 8 HOH A 38 538 150 HOH HOH . L 8 HOH A 39 539 25 HOH HOH . L 8 HOH A 40 540 22 HOH HOH . L 8 HOH A 41 541 206 HOH HOH . L 8 HOH A 42 542 112 HOH HOH . L 8 HOH A 43 543 215 HOH HOH . L 8 HOH A 44 544 58 HOH HOH . L 8 HOH A 45 545 61 HOH HOH . L 8 HOH A 46 546 158 HOH HOH . L 8 HOH A 47 547 140 HOH HOH . L 8 HOH A 48 548 171 HOH HOH . L 8 HOH A 49 549 208 HOH HOH . L 8 HOH A 50 550 168 HOH HOH . L 8 HOH A 51 551 86 HOH HOH . L 8 HOH A 52 552 27 HOH HOH . L 8 HOH A 53 553 53 HOH HOH . L 8 HOH A 54 554 9 HOH HOH . L 8 HOH A 55 555 176 HOH HOH . L 8 HOH A 56 556 93 HOH HOH . L 8 HOH A 57 557 60 HOH HOH . L 8 HOH A 58 558 39 HOH HOH . L 8 HOH A 59 559 212 HOH HOH . L 8 HOH A 60 560 213 HOH HOH . L 8 HOH A 61 561 139 HOH HOH . L 8 HOH A 62 562 77 HOH HOH . L 8 HOH A 63 563 216 HOH HOH . L 8 HOH A 64 564 96 HOH HOH . L 8 HOH A 65 565 114 HOH HOH . L 8 HOH A 66 566 66 HOH HOH . L 8 HOH A 67 567 111 HOH HOH . L 8 HOH A 68 568 29 HOH HOH . L 8 HOH A 69 569 44 HOH HOH . L 8 HOH A 70 570 8 HOH HOH . L 8 HOH A 71 571 65 HOH HOH . L 8 HOH A 72 572 146 HOH HOH . L 8 HOH A 73 573 194 HOH HOH . L 8 HOH A 74 574 152 HOH HOH . L 8 HOH A 75 575 37 HOH HOH . L 8 HOH A 76 576 78 HOH HOH . L 8 HOH A 77 577 143 HOH HOH . L 8 HOH A 78 578 72 HOH HOH . L 8 HOH A 79 579 21 HOH HOH . L 8 HOH A 80 580 3 HOH HOH . L 8 HOH A 81 581 23 HOH HOH . L 8 HOH A 82 582 18 HOH HOH . L 8 HOH A 83 583 35 HOH HOH . L 8 HOH A 84 584 16 HOH HOH . L 8 HOH A 85 585 69 HOH HOH . L 8 HOH A 86 586 70 HOH HOH . L 8 HOH A 87 587 97 HOH HOH . L 8 HOH A 88 588 59 HOH HOH . L 8 HOH A 89 589 118 HOH HOH . L 8 HOH A 90 590 1 HOH HOH . L 8 HOH A 91 591 32 HOH HOH . L 8 HOH A 92 592 30 HOH HOH . L 8 HOH A 93 593 10 HOH HOH . L 8 HOH A 94 594 83 HOH HOH . L 8 HOH A 95 595 135 HOH HOH . L 8 HOH A 96 596 40 HOH HOH . L 8 HOH A 97 597 5 HOH HOH . L 8 HOH A 98 598 2 HOH HOH . L 8 HOH A 99 599 119 HOH HOH . L 8 HOH A 100 600 71 HOH HOH . L 8 HOH A 101 601 149 HOH HOH . L 8 HOH A 102 602 175 HOH HOH . L 8 HOH A 103 603 153 HOH HOH . L 8 HOH A 104 604 17 HOH HOH . L 8 HOH A 105 605 20 HOH HOH . L 8 HOH A 106 606 47 HOH HOH . L 8 HOH A 107 607 190 HOH HOH . L 8 HOH A 108 608 80 HOH HOH . L 8 HOH A 109 609 115 HOH HOH . L 8 HOH A 110 610 108 HOH HOH . L 8 HOH A 111 611 129 HOH HOH . L 8 HOH A 112 612 182 HOH HOH . L 8 HOH A 113 613 13 HOH HOH . L 8 HOH A 114 614 28 HOH HOH . L 8 HOH A 115 615 160 HOH HOH . L 8 HOH A 116 616 74 HOH HOH . L 8 HOH A 117 617 101 HOH HOH . L 8 HOH A 118 618 52 HOH HOH . L 8 HOH A 119 619 197 HOH HOH . L 8 HOH A 120 620 147 HOH HOH . L 8 HOH A 121 621 201 HOH HOH . L 8 HOH A 122 622 7 HOH HOH . L 8 HOH A 123 623 4 HOH HOH . L 8 HOH A 124 624 89 HOH HOH . L 8 HOH A 125 625 6 HOH HOH . L 8 HOH A 126 626 14 HOH HOH . L 8 HOH A 127 627 48 HOH HOH . L 8 HOH A 128 628 36 HOH HOH . L 8 HOH A 129 629 165 HOH HOH . L 8 HOH A 130 630 24 HOH HOH . L 8 HOH A 131 631 102 HOH HOH . L 8 HOH A 132 632 161 HOH HOH . L 8 HOH A 133 633 67 HOH HOH . L 8 HOH A 134 634 137 HOH HOH . L 8 HOH A 135 635 217 HOH HOH . L 8 HOH A 136 636 104 HOH HOH . L 8 HOH A 137 637 87 HOH HOH . L 8 HOH A 138 638 179 HOH HOH . L 8 HOH A 139 639 218 HOH HOH . L 8 HOH A 140 640 19 HOH HOH . L 8 HOH A 141 641 198 HOH HOH . L 8 HOH A 142 642 55 HOH HOH . L 8 HOH A 143 643 156 HOH HOH . L 8 HOH A 144 644 46 HOH HOH . L 8 HOH A 145 645 210 HOH HOH . L 8 HOH A 146 646 75 HOH HOH . L 8 HOH A 147 647 144 HOH HOH . L 8 HOH A 148 648 82 HOH HOH . L 8 HOH A 149 649 56 HOH HOH . L 8 HOH A 150 650 84 HOH HOH . L 8 HOH A 151 651 92 HOH HOH . L 8 HOH A 152 652 73 HOH HOH . L 8 HOH A 153 653 109 HOH HOH . L 8 HOH A 154 654 127 HOH HOH . L 8 HOH A 155 655 91 HOH HOH . L 8 HOH A 156 656 76 HOH HOH . L 8 HOH A 157 657 122 HOH HOH . L 8 HOH A 158 658 105 HOH HOH . L 8 HOH A 159 659 45 HOH HOH . L 8 HOH A 160 660 117 HOH HOH . L 8 HOH A 161 661 95 HOH HOH . L 8 HOH A 162 662 107 HOH HOH . L 8 HOH A 163 663 42 HOH HOH . L 8 HOH A 164 664 12 HOH HOH . L 8 HOH A 165 665 50 HOH HOH . L 8 HOH A 166 666 155 HOH HOH . L 8 HOH A 167 667 141 HOH HOH . L 8 HOH A 168 668 57 HOH HOH . L 8 HOH A 169 669 174 HOH HOH . L 8 HOH A 170 670 100 HOH HOH . L 8 HOH A 171 671 132 HOH HOH . L 8 HOH A 172 672 166 HOH HOH . L 8 HOH A 173 673 223 HOH HOH . L 8 HOH A 174 674 133 HOH HOH . L 8 HOH A 175 675 154 HOH HOH . L 8 HOH A 176 676 159 HOH HOH . L 8 HOH A 177 677 113 HOH HOH . L 8 HOH A 178 678 138 HOH HOH . L 8 HOH A 179 679 110 HOH HOH . L 8 HOH A 180 680 103 HOH HOH . L 8 HOH A 181 681 49 HOH HOH . L 8 HOH A 182 682 199 HOH HOH . L 8 HOH A 183 683 38 HOH HOH . L 8 HOH A 184 684 63 HOH HOH . L 8 HOH A 185 685 85 HOH HOH . L 8 HOH A 186 686 163 HOH HOH . L 8 HOH A 187 687 170 HOH HOH . L 8 HOH A 188 688 180 HOH HOH . L 8 HOH A 189 689 184 HOH HOH . L 8 HOH A 190 690 193 HOH HOH . L 8 HOH A 191 691 125 HOH HOH . L 8 HOH A 192 692 192 HOH HOH . L 8 HOH A 193 693 68 HOH HOH . L 8 HOH A 194 694 177 HOH HOH . L 8 HOH A 195 695 124 HOH HOH . L 8 HOH A 196 696 145 HOH HOH . L 8 HOH A 197 697 64 HOH HOH . L 8 HOH A 198 698 185 HOH HOH . L 8 HOH A 199 699 203 HOH HOH . L 8 HOH A 200 700 200 HOH HOH . L 8 HOH A 201 701 183 HOH HOH . L 8 HOH A 202 702 134 HOH HOH . L 8 HOH A 203 703 157 HOH HOH . L 8 HOH A 204 704 221 HOH HOH . L 8 HOH A 205 705 222 HOH HOH . L 8 HOH A 206 706 204 HOH HOH . L 8 HOH A 207 707 196 HOH HOH . L 8 HOH A 208 708 195 HOH HOH . L 8 HOH A 209 709 173 HOH HOH . L 8 HOH A 210 710 207 HOH HOH . L 8 HOH A 211 711 186 HOH HOH . L 8 HOH A 212 712 214 HOH HOH . L 8 HOH A 213 713 202 HOH HOH . L 8 HOH A 214 714 88 HOH HOH . L 8 HOH A 215 715 178 HOH HOH . L 8 HOH A 216 716 211 HOH HOH . L 8 HOH A 217 717 130 HOH HOH . L 8 HOH A 218 718 94 HOH HOH . L 8 HOH A 219 719 34 HOH HOH . L 8 HOH A 220 720 191 HOH HOH . L 8 HOH A 221 721 98 HOH HOH . L 8 HOH A 222 722 219 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . J 6 12.354 -19.793 20.719 0.8 24.56 ? P PO4 409 A 1 HETATM 2 O O1 PO4 . . . J 6 12.946 -18.687 19.842 0.8 22.24 ? O1 PO4 409 A 1 HETATM 3 O O2 PO4 . . . J 6 10.907 -19.518 21.087 0.8 20.84 ? O2 PO4 409 A 1 HETATM 4 O O3 PO4 . . . J 6 12.409 -21.129 19.995 0.8 28.77 ? O3 PO4 409 A 1 HETATM 5 O O4 PO4 . . . J 6 13.186 -19.863 22.011 0.8 26.68 ? O4 PO4 409 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 5 #