data_7PN7 # _model_server_result.job_id Tbnk1qu7_V3D7c_tYx03RQ _model_server_result.datetime_utc '2024-11-14 17:11:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7pn7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 7PN7 # _exptl.entry_id 7PN7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.83 _cell.angle_gamma 90 _cell.entry_id 7PN7 _cell.length_a 51.246 _cell.length_b 57.897 _cell.length_c 60.965 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PN7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 278 A CYS 278 1_555 A SG CYS 319 A CYS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? covale ? covale1 A ND2 ASN 11 A ASN 11 1_555 F C1 NAG . A NAG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? covale ? covale2 A ND2 ASN 141 A ASN 141 1_555 H C1 NAG . A NAG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale3 A ND2 ASN 161 A ASN 161 1_555 I C1 NAG . A NAG 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? covale ? covale4 A ND2 ASN 182 A ASN 182 1_555 J C1 NAG . A NAG 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? covale ? covale5 A ND2 ASN 286 A ASN 286 1_555 G C1 NAG . A NAG 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.425 ? metalc ? metalc1 A SG CYS 36 A CYS 36 1_555 C FE HEM . A HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc2 A OE2 GLU 122 A GLU 122 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc3 A O GLY 123 A GLY 123 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc4 A OG SER 126 A SER 126 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc5 C O1A HEM . A HEM 402 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc6 D MG MG . A MG 403 1_555 L O HOH . A HOH 575 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? metalc ? metalc7 D MG MG . A MG 403 1_555 L O HOH . A HOH 629 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7PN7 _atom_sites.fract_transf_matrix[1][1] 0.019514 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007038 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017272 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017437 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 401 1 PO4 PO4 . C 3 HEM A 1 402 1000 HEM HEM . D 4 MG A 1 403 1001 MG MG . E 5 CL A 1 404 1002 CL CL . F 6 NAG A 1 405 1003 NAG NAG . G 6 NAG A 1 406 1004 NAG NAG . H 6 NAG A 1 407 1005 NAG NAG . I 6 NAG A 1 408 1006 NAG NAG . J 6 NAG A 1 409 1007 NAG NAG . K 7 PAM A 1 410 1008 PAM PAM . L 8 HOH A 1 501 161 HOH HOH . L 8 HOH A 2 502 180 HOH HOH . L 8 HOH A 3 503 159 HOH HOH . L 8 HOH A 4 504 157 HOH HOH . L 8 HOH A 5 505 197 HOH HOH . L 8 HOH A 6 506 122 HOH HOH . L 8 HOH A 7 507 24 HOH HOH . L 8 HOH A 8 508 143 HOH HOH . L 8 HOH A 9 509 80 HOH HOH . L 8 HOH A 10 510 128 HOH HOH . L 8 HOH A 11 511 69 HOH HOH . L 8 HOH A 12 512 145 HOH HOH . L 8 HOH A 13 513 57 HOH HOH . L 8 HOH A 14 514 14 HOH HOH . L 8 HOH A 15 515 87 HOH HOH . L 8 HOH A 16 516 186 HOH HOH . L 8 HOH A 17 517 86 HOH HOH . L 8 HOH A 18 518 140 HOH HOH . L 8 HOH A 19 519 115 HOH HOH . L 8 HOH A 20 520 162 HOH HOH . L 8 HOH A 21 521 138 HOH HOH . L 8 HOH A 22 522 187 HOH HOH . L 8 HOH A 23 523 171 HOH HOH . L 8 HOH A 24 524 124 HOH HOH . L 8 HOH A 25 525 34 HOH HOH . L 8 HOH A 26 526 63 HOH HOH . L 8 HOH A 27 527 15 HOH HOH . L 8 HOH A 28 528 151 HOH HOH . L 8 HOH A 29 529 121 HOH HOH . L 8 HOH A 30 530 139 HOH HOH . L 8 HOH A 31 531 35 HOH HOH . L 8 HOH A 32 532 45 HOH HOH . L 8 HOH A 33 533 154 HOH HOH . L 8 HOH A 34 534 60 HOH HOH . L 8 HOH A 35 535 84 HOH HOH . L 8 HOH A 36 536 172 HOH HOH . L 8 HOH A 37 537 85 HOH HOH . L 8 HOH A 38 538 131 HOH HOH . L 8 HOH A 39 539 110 HOH HOH . L 8 HOH A 40 540 37 HOH HOH . L 8 HOH A 41 541 169 HOH HOH . L 8 HOH A 42 542 168 HOH HOH . L 8 HOH A 43 543 125 HOH HOH . L 8 HOH A 44 544 70 HOH HOH . L 8 HOH A 45 545 126 HOH HOH . L 8 HOH A 46 546 98 HOH HOH . L 8 HOH A 47 547 93 HOH HOH . L 8 HOH A 48 548 114 HOH HOH . L 8 HOH A 49 549 94 HOH HOH . L 8 HOH A 50 550 27 HOH HOH . L 8 HOH A 51 551 65 HOH HOH . L 8 HOH A 52 552 68 HOH HOH . L 8 HOH A 53 553 2 HOH HOH . L 8 HOH A 54 554 109 HOH HOH . L 8 HOH A 55 555 147 HOH HOH . L 8 HOH A 56 556 165 HOH HOH . L 8 HOH A 57 557 146 HOH HOH . L 8 HOH A 58 558 52 HOH HOH . L 8 HOH A 59 559 25 HOH HOH . L 8 HOH A 60 560 11 HOH HOH . L 8 HOH A 61 561 6 HOH HOH . L 8 HOH A 62 562 129 HOH HOH . L 8 HOH A 63 563 177 HOH HOH . L 8 HOH A 64 564 21 HOH HOH . L 8 HOH A 65 565 50 HOH HOH . L 8 HOH A 66 566 9 HOH HOH . L 8 HOH A 67 567 133 HOH HOH . L 8 HOH A 68 568 181 HOH HOH . L 8 HOH A 69 569 23 HOH HOH . L 8 HOH A 70 570 183 HOH HOH . L 8 HOH A 71 571 58 HOH HOH . L 8 HOH A 72 572 119 HOH HOH . L 8 HOH A 73 573 142 HOH HOH . L 8 HOH A 74 574 18 HOH HOH . L 8 HOH A 75 575 17 HOH HOH . L 8 HOH A 76 576 141 HOH HOH . L 8 HOH A 77 577 22 HOH HOH . L 8 HOH A 78 578 36 HOH HOH . L 8 HOH A 79 579 101 HOH HOH . L 8 HOH A 80 580 5 HOH HOH . L 8 HOH A 81 581 185 HOH HOH . L 8 HOH A 82 582 118 HOH HOH . L 8 HOH A 83 583 8 HOH HOH . L 8 HOH A 84 584 164 HOH HOH . L 8 HOH A 85 585 108 HOH HOH . L 8 HOH A 86 586 90 HOH HOH . L 8 HOH A 87 587 54 HOH HOH . L 8 HOH A 88 588 38 HOH HOH . L 8 HOH A 89 589 135 HOH HOH . L 8 HOH A 90 590 61 HOH HOH . L 8 HOH A 91 591 97 HOH HOH . L 8 HOH A 92 592 20 HOH HOH . L 8 HOH A 93 593 102 HOH HOH . L 8 HOH A 94 594 46 HOH HOH . L 8 HOH A 95 595 150 HOH HOH . L 8 HOH A 96 596 26 HOH HOH . L 8 HOH A 97 597 53 HOH HOH . L 8 HOH A 98 598 28 HOH HOH . L 8 HOH A 99 599 19 HOH HOH . L 8 HOH A 100 600 3 HOH HOH . L 8 HOH A 101 601 103 HOH HOH . L 8 HOH A 102 602 137 HOH HOH . L 8 HOH A 103 603 12 HOH HOH . L 8 HOH A 104 604 4 HOH HOH . L 8 HOH A 105 605 107 HOH HOH . L 8 HOH A 106 606 149 HOH HOH . L 8 HOH A 107 607 39 HOH HOH . L 8 HOH A 108 608 123 HOH HOH . L 8 HOH A 109 609 40 HOH HOH . L 8 HOH A 110 610 156 HOH HOH . L 8 HOH A 111 611 7 HOH HOH . L 8 HOH A 112 612 72 HOH HOH . L 8 HOH A 113 613 1 HOH HOH . L 8 HOH A 114 614 48 HOH HOH . L 8 HOH A 115 615 78 HOH HOH . L 8 HOH A 116 616 31 HOH HOH . L 8 HOH A 117 617 160 HOH HOH . L 8 HOH A 118 618 64 HOH HOH . L 8 HOH A 119 619 74 HOH HOH . L 8 HOH A 120 620 33 HOH HOH . L 8 HOH A 121 621 13 HOH HOH . L 8 HOH A 122 622 198 HOH HOH . L 8 HOH A 123 623 82 HOH HOH . L 8 HOH A 124 624 51 HOH HOH . L 8 HOH A 125 625 95 HOH HOH . L 8 HOH A 126 626 29 HOH HOH . L 8 HOH A 127 627 83 HOH HOH . L 8 HOH A 128 628 75 HOH HOH . L 8 HOH A 129 629 10 HOH HOH . L 8 HOH A 130 630 44 HOH HOH . L 8 HOH A 131 631 47 HOH HOH . L 8 HOH A 132 632 67 HOH HOH . L 8 HOH A 133 633 116 HOH HOH . L 8 HOH A 134 634 43 HOH HOH . L 8 HOH A 135 635 41 HOH HOH . L 8 HOH A 136 636 56 HOH HOH . L 8 HOH A 137 637 130 HOH HOH . L 8 HOH A 138 638 111 HOH HOH . L 8 HOH A 139 639 105 HOH HOH . L 8 HOH A 140 640 117 HOH HOH . L 8 HOH A 141 641 92 HOH HOH . L 8 HOH A 142 642 134 HOH HOH . L 8 HOH A 143 643 136 HOH HOH . L 8 HOH A 144 644 88 HOH HOH . L 8 HOH A 145 645 91 HOH HOH . L 8 HOH A 146 646 89 HOH HOH . L 8 HOH A 147 647 127 HOH HOH . L 8 HOH A 148 648 59 HOH HOH . L 8 HOH A 149 649 71 HOH HOH . L 8 HOH A 150 650 66 HOH HOH . L 8 HOH A 151 651 104 HOH HOH . L 8 HOH A 152 652 76 HOH HOH . L 8 HOH A 153 653 79 HOH HOH . L 8 HOH A 154 654 81 HOH HOH . L 8 HOH A 155 655 32 HOH HOH . L 8 HOH A 156 656 96 HOH HOH . L 8 HOH A 157 657 132 HOH HOH . L 8 HOH A 158 658 113 HOH HOH . L 8 HOH A 159 659 182 HOH HOH . L 8 HOH A 160 660 179 HOH HOH . L 8 HOH A 161 661 77 HOH HOH . L 8 HOH A 162 662 42 HOH HOH . L 8 HOH A 163 663 73 HOH HOH . L 8 HOH A 164 664 100 HOH HOH . L 8 HOH A 165 665 62 HOH HOH . L 8 HOH A 166 666 189 HOH HOH . L 8 HOH A 167 667 152 HOH HOH . L 8 HOH A 168 668 120 HOH HOH . L 8 HOH A 169 669 184 HOH HOH . L 8 HOH A 170 670 176 HOH HOH . L 8 HOH A 171 671 173 HOH HOH . L 8 HOH A 172 672 30 HOH HOH . L 8 HOH A 173 673 153 HOH HOH . L 8 HOH A 174 674 106 HOH HOH . L 8 HOH A 175 675 99 HOH HOH . L 8 HOH A 176 676 148 HOH HOH . L 8 HOH A 177 677 144 HOH HOH . L 8 HOH A 178 678 166 HOH HOH . L 8 HOH A 179 679 196 HOH HOH . L 8 HOH A 180 680 191 HOH HOH . L 8 HOH A 181 681 163 HOH HOH . L 8 HOH A 182 682 178 HOH HOH . L 8 HOH A 183 683 112 HOH HOH . L 8 HOH A 184 684 192 HOH HOH . L 8 HOH A 185 685 155 HOH HOH . L 8 HOH A 186 686 193 HOH HOH . L 8 HOH A 187 687 16 HOH HOH . L 8 HOH A 188 688 175 HOH HOH . L 8 HOH A 189 689 158 HOH HOH . L 8 HOH A 190 690 170 HOH HOH . L 8 HOH A 191 691 49 HOH HOH . L 8 HOH A 192 692 174 HOH HOH . L 8 HOH A 193 693 167 HOH HOH . L 8 HOH A 194 694 188 HOH HOH . L 8 HOH A 195 695 55 HOH HOH . L 8 HOH A 196 696 195 HOH HOH . L 8 HOH A 197 697 194 HOH HOH . L 8 HOH A 198 698 190 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 6.188 _atom_site.Cartn_y -5.434 _atom_site.Cartn_z 4.922 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 9.84 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 230 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #