data_7PN8 # _model_server_result.job_id ufFLkTmjTus_m7SC8q0lCA _model_server_result.datetime_utc '2024-11-28 10:26:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7pn8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 7PN8 # _exptl.entry_id 7PN8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.08 _cell.angle_gamma 90 _cell.entry_id 7PN8 _cell.length_a 51.172 _cell.length_b 57.996 _cell.length_c 60.863 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PN8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 278 A CYS 278 1_555 A SG CYS 319 A CYS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? covale ? covale1 A ND2 ASN 11 A ASN 11 1_555 F C1 NAG . A NAG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale2 A ND2 ASN 141 A ASN 141 1_555 H C1 NAG . A NAG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale3 A ND2 ASN 161 A ASN 161 1_555 I C1 NAG . A NAG 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.458 ? covale ? covale4 A ND2 ASN 182 A ASN 182 1_555 J C1 NAG . A NAG 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.427 ? covale ? covale5 A ND2 ASN 286 A ASN 286 1_555 G C1 NAG . A NAG 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? metalc ? metalc1 A SG CYS 36 A CYS 36 1_555 C FE HEM . A HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc2 A OE2 GLU 122 A GLU 122 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc3 A O GLY 123 A GLY 123 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc4 A OG SER 126 A SER 126 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc5 C O1A HEM . A HEM 402 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? metalc ? metalc6 C FE HEM . A HEM 402 1_555 M O HOH . A HOH 591 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc7 D MG MG . A MG 403 1_555 M O HOH . A HOH 573 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc8 D MG MG . A MG 403 1_555 M O HOH . A HOH 646 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 428 n n P O2 PO4 sing 429 n n P O3 PO4 sing 430 n n P O4 PO4 sing 431 n n # _atom_sites.entry_id 7PN8 _atom_sites.fract_transf_matrix[1][1] 0.019542 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007142 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017243 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017493 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 401 1 PO4 PO4 . C 3 HEM A 1 402 1000 HEM HEM . D 4 MG A 1 403 1001 MG MG . E 5 CL A 1 404 1002 CL CL . F 6 NAG A 1 405 1003 NAG NAG . G 6 NAG A 1 406 1004 NAG NAG . H 6 NAG A 1 407 1005 NAG NAG . I 6 NAG A 1 408 1006 NAG NAG . J 6 NAG A 1 409 1007 NAG NAG . K 7 C14 A 1 410 1008 C14 C14 . L 8 GOL A 1 411 1009 GOL GOL . M 9 HOH A 1 501 219 HOH HOH . M 9 HOH A 2 502 205 HOH HOH . M 9 HOH A 3 503 229 HOH HOH . M 9 HOH A 4 504 151 HOH HOH . M 9 HOH A 5 505 227 HOH HOH . M 9 HOH A 6 506 131 HOH HOH . M 9 HOH A 7 507 144 HOH HOH . M 9 HOH A 8 508 111 HOH HOH . M 9 HOH A 9 509 176 HOH HOH . M 9 HOH A 10 510 37 HOH HOH . M 9 HOH A 11 511 202 HOH HOH . M 9 HOH A 12 512 85 HOH HOH . M 9 HOH A 13 513 153 HOH HOH . M 9 HOH A 14 514 199 HOH HOH . M 9 HOH A 15 515 18 HOH HOH . M 9 HOH A 16 516 100 HOH HOH . M 9 HOH A 17 517 28 HOH HOH . M 9 HOH A 18 518 119 HOH HOH . M 9 HOH A 19 519 23 HOH HOH . M 9 HOH A 20 520 200 HOH HOH . M 9 HOH A 21 521 175 HOH HOH . M 9 HOH A 22 522 65 HOH HOH . M 9 HOH A 23 523 45 HOH HOH . M 9 HOH A 24 524 130 HOH HOH . M 9 HOH A 25 525 60 HOH HOH . M 9 HOH A 26 526 129 HOH HOH . M 9 HOH A 27 527 55 HOH HOH . M 9 HOH A 28 528 161 HOH HOH . M 9 HOH A 29 529 36 HOH HOH . M 9 HOH A 30 530 148 HOH HOH . M 9 HOH A 31 531 49 HOH HOH . M 9 HOH A 32 532 240 HOH HOH . M 9 HOH A 33 533 137 HOH HOH . M 9 HOH A 34 534 170 HOH HOH . M 9 HOH A 35 535 75 HOH HOH . M 9 HOH A 36 536 112 HOH HOH . M 9 HOH A 37 537 234 HOH HOH . M 9 HOH A 38 538 48 HOH HOH . M 9 HOH A 39 539 123 HOH HOH . M 9 HOH A 40 540 243 HOH HOH . M 9 HOH A 41 541 142 HOH HOH . M 9 HOH A 42 542 194 HOH HOH . M 9 HOH A 43 543 126 HOH HOH . M 9 HOH A 44 544 128 HOH HOH . M 9 HOH A 45 545 67 HOH HOH . M 9 HOH A 46 546 208 HOH HOH . M 9 HOH A 47 547 149 HOH HOH . M 9 HOH A 48 548 158 HOH HOH . M 9 HOH A 49 549 201 HOH HOH . M 9 HOH A 50 550 177 HOH HOH . M 9 HOH A 51 551 125 HOH HOH . M 9 HOH A 52 552 70 HOH HOH . M 9 HOH A 53 553 163 HOH HOH . M 9 HOH A 54 554 33 HOH HOH . M 9 HOH A 55 555 35 HOH HOH . M 9 HOH A 56 556 17 HOH HOH . M 9 HOH A 57 557 181 HOH HOH . M 9 HOH A 58 558 16 HOH HOH . M 9 HOH A 59 559 1 HOH HOH . M 9 HOH A 60 560 25 HOH HOH . M 9 HOH A 61 561 168 HOH HOH . M 9 HOH A 62 562 239 HOH HOH . M 9 HOH A 63 563 117 HOH HOH . M 9 HOH A 64 564 173 HOH HOH . M 9 HOH A 65 565 184 HOH HOH . M 9 HOH A 66 566 53 HOH HOH . M 9 HOH A 67 567 39 HOH HOH . M 9 HOH A 68 568 87 HOH HOH . M 9 HOH A 69 569 183 HOH HOH . M 9 HOH A 70 570 41 HOH HOH . M 9 HOH A 71 571 98 HOH HOH . M 9 HOH A 72 572 11 HOH HOH . M 9 HOH A 73 573 22 HOH HOH . M 9 HOH A 74 574 91 HOH HOH . M 9 HOH A 75 575 20 HOH HOH . M 9 HOH A 76 576 157 HOH HOH . M 9 HOH A 77 577 150 HOH HOH . M 9 HOH A 78 578 134 HOH HOH . M 9 HOH A 79 579 89 HOH HOH . M 9 HOH A 80 580 192 HOH HOH . M 9 HOH A 81 581 26 HOH HOH . M 9 HOH A 82 582 180 HOH HOH . M 9 HOH A 83 583 96 HOH HOH . M 9 HOH A 84 584 62 HOH HOH . M 9 HOH A 85 585 145 HOH HOH . M 9 HOH A 86 586 4 HOH HOH . M 9 HOH A 87 587 42 HOH HOH . M 9 HOH A 88 588 7 HOH HOH . M 9 HOH A 89 589 52 HOH HOH . M 9 HOH A 90 590 241 HOH HOH . M 9 HOH A 91 591 244 HOH HOH . M 9 HOH A 92 592 51 HOH HOH . M 9 HOH A 93 593 92 HOH HOH . M 9 HOH A 94 594 155 HOH HOH . M 9 HOH A 95 595 3 HOH HOH . M 9 HOH A 96 596 120 HOH HOH . M 9 HOH A 97 597 9 HOH HOH . M 9 HOH A 98 598 164 HOH HOH . M 9 HOH A 99 599 159 HOH HOH . M 9 HOH A 100 600 12 HOH HOH . M 9 HOH A 101 601 172 HOH HOH . M 9 HOH A 102 602 24 HOH HOH . M 9 HOH A 103 603 215 HOH HOH . M 9 HOH A 104 604 5 HOH HOH . M 9 HOH A 105 605 58 HOH HOH . M 9 HOH A 106 606 8 HOH HOH . M 9 HOH A 107 607 114 HOH HOH . M 9 HOH A 108 608 209 HOH HOH . M 9 HOH A 109 609 44 HOH HOH . M 9 HOH A 110 610 6 HOH HOH . M 9 HOH A 111 611 2 HOH HOH . M 9 HOH A 112 612 105 HOH HOH . M 9 HOH A 113 613 154 HOH HOH . M 9 HOH A 114 614 81 HOH HOH . M 9 HOH A 115 615 61 HOH HOH . M 9 HOH A 116 616 101 HOH HOH . M 9 HOH A 117 617 204 HOH HOH . M 9 HOH A 118 618 179 HOH HOH . M 9 HOH A 119 619 29 HOH HOH . M 9 HOH A 120 620 43 HOH HOH . M 9 HOH A 121 621 69 HOH HOH . M 9 HOH A 122 622 56 HOH HOH . M 9 HOH A 123 623 27 HOH HOH . M 9 HOH A 124 624 138 HOH HOH . M 9 HOH A 125 625 143 HOH HOH . M 9 HOH A 126 626 72 HOH HOH . M 9 HOH A 127 627 206 HOH HOH . M 9 HOH A 128 628 225 HOH HOH . M 9 HOH A 129 629 31 HOH HOH . M 9 HOH A 130 630 132 HOH HOH . M 9 HOH A 131 631 223 HOH HOH . M 9 HOH A 132 632 230 HOH HOH . M 9 HOH A 133 633 47 HOH HOH . M 9 HOH A 134 634 116 HOH HOH . M 9 HOH A 135 635 79 HOH HOH . M 9 HOH A 136 636 212 HOH HOH . M 9 HOH A 137 637 214 HOH HOH . M 9 HOH A 138 638 14 HOH HOH . M 9 HOH A 139 639 21 HOH HOH . M 9 HOH A 140 640 15 HOH HOH . M 9 HOH A 141 641 34 HOH HOH . M 9 HOH A 142 642 84 HOH HOH . M 9 HOH A 143 643 166 HOH HOH . M 9 HOH A 144 644 140 HOH HOH . M 9 HOH A 145 645 73 HOH HOH . M 9 HOH A 146 646 10 HOH HOH . M 9 HOH A 147 647 57 HOH HOH . M 9 HOH A 148 648 211 HOH HOH . M 9 HOH A 149 649 68 HOH HOH . M 9 HOH A 150 650 83 HOH HOH . M 9 HOH A 151 651 77 HOH HOH . M 9 HOH A 152 652 97 HOH HOH . M 9 HOH A 153 653 122 HOH HOH . M 9 HOH A 154 654 203 HOH HOH . M 9 HOH A 155 655 32 HOH HOH . M 9 HOH A 156 656 171 HOH HOH . M 9 HOH A 157 657 186 HOH HOH . M 9 HOH A 158 658 182 HOH HOH . M 9 HOH A 159 659 141 HOH HOH . M 9 HOH A 160 660 189 HOH HOH . M 9 HOH A 161 661 13 HOH HOH . M 9 HOH A 162 662 113 HOH HOH . M 9 HOH A 163 663 165 HOH HOH . M 9 HOH A 164 664 124 HOH HOH . M 9 HOH A 165 665 110 HOH HOH . M 9 HOH A 166 666 38 HOH HOH . M 9 HOH A 167 667 226 HOH HOH . M 9 HOH A 168 668 136 HOH HOH . M 9 HOH A 169 669 103 HOH HOH . M 9 HOH A 170 670 63 HOH HOH . M 9 HOH A 171 671 76 HOH HOH . M 9 HOH A 172 672 102 HOH HOH . M 9 HOH A 173 673 107 HOH HOH . M 9 HOH A 174 674 66 HOH HOH . M 9 HOH A 175 675 71 HOH HOH . M 9 HOH A 176 676 109 HOH HOH . M 9 HOH A 177 677 147 HOH HOH . M 9 HOH A 178 678 95 HOH HOH . M 9 HOH A 179 679 156 HOH HOH . M 9 HOH A 180 680 115 HOH HOH . M 9 HOH A 181 681 121 HOH HOH . M 9 HOH A 182 682 106 HOH HOH . M 9 HOH A 183 683 152 HOH HOH . M 9 HOH A 184 684 64 HOH HOH . M 9 HOH A 185 685 190 HOH HOH . M 9 HOH A 186 686 99 HOH HOH . M 9 HOH A 187 687 94 HOH HOH . M 9 HOH A 188 688 78 HOH HOH . M 9 HOH A 189 689 50 HOH HOH . M 9 HOH A 190 690 30 HOH HOH . M 9 HOH A 191 691 146 HOH HOH . M 9 HOH A 192 692 59 HOH HOH . M 9 HOH A 193 693 46 HOH HOH . M 9 HOH A 194 694 82 HOH HOH . M 9 HOH A 195 695 74 HOH HOH . M 9 HOH A 196 696 191 HOH HOH . M 9 HOH A 197 697 216 HOH HOH . M 9 HOH A 198 698 174 HOH HOH . M 9 HOH A 199 699 86 HOH HOH . M 9 HOH A 200 700 127 HOH HOH . M 9 HOH A 201 701 40 HOH HOH . M 9 HOH A 202 702 188 HOH HOH . M 9 HOH A 203 703 80 HOH HOH . M 9 HOH A 204 704 236 HOH HOH . M 9 HOH A 205 705 222 HOH HOH . M 9 HOH A 206 706 108 HOH HOH . M 9 HOH A 207 707 104 HOH HOH . M 9 HOH A 208 708 90 HOH HOH . M 9 HOH A 209 709 228 HOH HOH . M 9 HOH A 210 710 88 HOH HOH . M 9 HOH A 211 711 187 HOH HOH . M 9 HOH A 212 712 135 HOH HOH . M 9 HOH A 213 713 220 HOH HOH . M 9 HOH A 214 714 233 HOH HOH . M 9 HOH A 215 715 232 HOH HOH . M 9 HOH A 216 716 237 HOH HOH . M 9 HOH A 217 717 197 HOH HOH . M 9 HOH A 218 718 167 HOH HOH . M 9 HOH A 219 719 207 HOH HOH . M 9 HOH A 220 720 242 HOH HOH . M 9 HOH A 221 721 224 HOH HOH . M 9 HOH A 222 722 133 HOH HOH . M 9 HOH A 223 723 160 HOH HOH . M 9 HOH A 224 724 221 HOH HOH . M 9 HOH A 225 725 196 HOH HOH . M 9 HOH A 226 726 198 HOH HOH . M 9 HOH A 227 727 118 HOH HOH . M 9 HOH A 228 728 185 HOH HOH . M 9 HOH A 229 729 162 HOH HOH . M 9 HOH A 230 730 218 HOH HOH . M 9 HOH A 231 731 169 HOH HOH . M 9 HOH A 232 732 139 HOH HOH . M 9 HOH A 233 733 19 HOH HOH . M 9 HOH A 234 734 54 HOH HOH . M 9 HOH A 235 735 210 HOH HOH . M 9 HOH A 236 736 213 HOH HOH . M 9 HOH A 237 737 193 HOH HOH . M 9 HOH A 238 738 235 HOH HOH . M 9 HOH A 239 739 93 HOH HOH . M 9 HOH A 240 740 231 HOH HOH . M 9 HOH A 241 741 217 HOH HOH . M 9 HOH A 242 742 178 HOH HOH . M 9 HOH A 243 743 195 HOH HOH . M 9 HOH A 244 744 238 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . B 2 11.955 -19.967 20.402 1 35.25 ? P PO4 401 A 1 HETATM 2 O O1 PO4 . . . B 2 11.855 -21.23 19.55 1 39.47 ? O1 PO4 401 A 1 HETATM 3 O O2 PO4 . . . B 2 10.555 -19.564 20.856 1 29.75 ? O2 PO4 401 A 1 HETATM 4 O O3 PO4 . . . B 2 12.607 -18.844 19.575 1 32.04 ? O3 PO4 401 A 1 HETATM 5 O O4 PO4 . . . B 2 12.825 -20.252 21.636 1 38.42 ? O4 PO4 401 A 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 387 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #