data_7PNH
#
_model_server_result.job_id            kB73_l8ws2Jbc0KSCA7jOw 
_model_server_result.datetime_utc      '2024-11-01 06:33:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7pnh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":207}' 
#
_entry.id    7PNH 
#
_exptl.entry_id    7PNH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.005 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NITRATE ION' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7PNH 
_cell.length_a            77.2 
_cell.length_b            77.2 
_cell.length_c            38.53 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7PNH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 AAA CYS 6 1_555 A SG CYS 127 AAA CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf2 A SG CYS 30 AAA CYS 30 1_555 A SG CYS 115 AAA CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? 
disulf ? disulf3 A SG CYS 64 AAA CYS 64 1_555 A SG CYS 80 AAA CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? 
disulf ? disulf4 A SG CYS 76 AAA CYS 76 1_555 A SG CYS 94 AAA CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
metalc ? metalc1 A ND1 HIS 15 AAA HIS 15 1_555 K PT PT . AAA PT 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? 
metalc ? metalc2 K PT PT . AAA PT 210 1_555 O O HOH . AAA HOH 332 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? 
metalc ? metalc3 K PT PT . AAA PT 210 1_555 O O HOH . AAA HOH 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? 
metalc ? metalc4 M N1 IMD . AAA IMD 212 1_555 N PT PT . AAA PT 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? 
#
_chem_comp.formula           'N O3 -1' 
_chem_comp.formula_weight    62.005 
_chem_comp.id                NO3 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NITRATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N O1 NO3 doub 269 n n 
N O2 NO3 sing 270 n n 
N O3 NO3 sing 271 n n 
#
_atom_sites.entry_id                     7PNH 
_atom_sites.fract_transf_matrix[1][1]    0.012953 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012953 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.025954 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL AAA 1 201 1 GOL GOL . 
C 3 NO3 AAA 1 202 1 NO3 NO3 . 
D 3 NO3 AAA 1 203 2 NO3 NO3 . 
E 3 NO3 AAA 1 204 3 NO3 NO3 . 
F 3 NO3 AAA 1 205 4 NO3 NO3 . 
G 3 NO3 AAA 1 206 5 NO3 NO3 . 
H 3 NO3 AAA 1 207 7 NO3 NO3 . 
I 3 NO3 AAA 1 208 9 NO3 NO3 . 
J 3 NO3 AAA 1 209 10 NO3 NO3 . 
K 4 PT AAA 1 210 1 PT PT . 
L 5 DMS AAA 1 211 1 DMS DMS . 
M 6 IMD AAA 1 212 1 IMD IMD . 
N 4 PT AAA 1 213 1 PT PT . 
O 7 HOH AAA 1 301 92 HOH HOH . 
O 7 HOH AAA 2 302 114 HOH HOH . 
O 7 HOH AAA 3 303 185 HOH HOH . 
O 7 HOH AAA 4 304 161 HOH HOH . 
O 7 HOH AAA 5 305 81 HOH HOH . 
O 7 HOH AAA 6 306 30 HOH HOH . 
O 7 HOH AAA 7 307 182 HOH HOH . 
O 7 HOH AAA 8 308 86 HOH HOH . 
O 7 HOH AAA 9 309 106 HOH HOH . 
O 7 HOH AAA 10 310 186 HOH HOH . 
O 7 HOH AAA 11 311 146 HOH HOH . 
O 7 HOH AAA 12 312 57 HOH HOH . 
O 7 HOH AAA 13 313 44 HOH HOH . 
O 7 HOH AAA 14 314 46 HOH HOH . 
O 7 HOH AAA 15 315 125 HOH HOH . 
O 7 HOH AAA 16 316 33 HOH HOH . 
O 7 HOH AAA 17 317 10 HOH HOH . 
O 7 HOH AAA 18 318 173 HOH HOH . 
O 7 HOH AAA 19 319 21 HOH HOH . 
O 7 HOH AAA 20 320 159 HOH HOH . 
O 7 HOH AAA 21 321 73 HOH HOH . 
O 7 HOH AAA 22 322 178 HOH HOH . 
O 7 HOH AAA 23 323 109 HOH HOH . 
O 7 HOH AAA 24 324 111 HOH HOH . 
O 7 HOH AAA 25 325 7 HOH HOH . 
O 7 HOH AAA 26 326 72 HOH HOH . 
O 7 HOH AAA 27 327 98 HOH HOH . 
O 7 HOH AAA 28 328 142 HOH HOH . 
O 7 HOH AAA 29 329 102 HOH HOH . 
O 7 HOH AAA 30 330 97 HOH HOH . 
O 7 HOH AAA 31 331 83 HOH HOH . 
O 7 HOH AAA 32 332 138 HOH HOH . 
O 7 HOH AAA 33 333 9 HOH HOH . 
O 7 HOH AAA 34 334 56 HOH HOH . 
O 7 HOH AAA 35 335 12 HOH HOH . 
O 7 HOH AAA 36 336 25 HOH HOH . 
O 7 HOH AAA 37 337 13 HOH HOH . 
O 7 HOH AAA 38 338 18 HOH HOH . 
O 7 HOH AAA 39 339 110 HOH HOH . 
O 7 HOH AAA 40 340 11 HOH HOH . 
O 7 HOH AAA 41 341 87 HOH HOH . 
O 7 HOH AAA 42 342 2 HOH HOH . 
O 7 HOH AAA 43 343 107 HOH HOH . 
O 7 HOH AAA 44 344 41 HOH HOH . 
O 7 HOH AAA 45 345 4 HOH HOH . 
O 7 HOH AAA 46 346 150 HOH HOH . 
O 7 HOH AAA 47 347 29 HOH HOH . 
O 7 HOH AAA 48 348 177 HOH HOH . 
O 7 HOH AAA 49 349 34 HOH HOH . 
O 7 HOH AAA 50 350 88 HOH HOH . 
O 7 HOH AAA 51 351 15 HOH HOH . 
O 7 HOH AAA 52 352 147 HOH HOH . 
O 7 HOH AAA 53 353 141 HOH HOH . 
O 7 HOH AAA 54 354 32 HOH HOH . 
O 7 HOH AAA 55 355 14 HOH HOH . 
O 7 HOH AAA 56 356 38 HOH HOH . 
O 7 HOH AAA 57 357 99 HOH HOH . 
O 7 HOH AAA 58 358 27 HOH HOH . 
O 7 HOH AAA 59 359 63 HOH HOH . 
O 7 HOH AAA 60 360 39 HOH HOH . 
O 7 HOH AAA 61 361 174 HOH HOH . 
O 7 HOH AAA 62 362 133 HOH HOH . 
O 7 HOH AAA 63 363 61 HOH HOH . 
O 7 HOH AAA 64 364 22 HOH HOH . 
O 7 HOH AAA 65 365 84 HOH HOH . 
O 7 HOH AAA 66 366 55 HOH HOH . 
O 7 HOH AAA 67 367 95 HOH HOH . 
O 7 HOH AAA 68 368 116 HOH HOH . 
O 7 HOH AAA 69 369 1 HOH HOH . 
O 7 HOH AAA 70 370 35 HOH HOH . 
O 7 HOH AAA 71 371 155 HOH HOH . 
O 7 HOH AAA 72 372 94 HOH HOH . 
O 7 HOH AAA 73 373 59 HOH HOH . 
O 7 HOH AAA 74 374 37 HOH HOH . 
O 7 HOH AAA 75 375 54 HOH HOH . 
O 7 HOH AAA 76 376 74 HOH HOH . 
O 7 HOH AAA 77 377 135 HOH HOH . 
O 7 HOH AAA 78 378 101 HOH HOH . 
O 7 HOH AAA 79 379 19 HOH HOH . 
O 7 HOH AAA 80 380 184 HOH HOH . 
O 7 HOH AAA 81 381 52 HOH HOH . 
O 7 HOH AAA 82 382 130 HOH HOH . 
O 7 HOH AAA 83 383 134 HOH HOH . 
O 7 HOH AAA 84 384 43 HOH HOH . 
O 7 HOH AAA 85 385 24 HOH HOH . 
O 7 HOH AAA 86 386 20 HOH HOH . 
O 7 HOH AAA 87 387 108 HOH HOH . 
O 7 HOH AAA 88 388 93 HOH HOH . 
O 7 HOH AAA 89 389 188 HOH HOH . 
O 7 HOH AAA 90 390 126 HOH HOH . 
O 7 HOH AAA 91 391 45 HOH HOH . 
O 7 HOH AAA 92 392 112 HOH HOH . 
O 7 HOH AAA 93 393 8 HOH HOH . 
O 7 HOH AAA 94 394 187 HOH HOH . 
O 7 HOH AAA 95 395 122 HOH HOH . 
O 7 HOH AAA 96 396 26 HOH HOH . 
O 7 HOH AAA 97 397 16 HOH HOH . 
O 7 HOH AAA 98 398 53 HOH HOH . 
O 7 HOH AAA 99 399 42 HOH HOH . 
O 7 HOH AAA 100 400 5 HOH HOH . 
O 7 HOH AAA 101 401 136 HOH HOH . 
O 7 HOH AAA 102 402 69 HOH HOH . 
O 7 HOH AAA 103 403 158 HOH HOH . 
O 7 HOH AAA 104 404 189 HOH HOH . 
O 7 HOH AAA 105 405 124 HOH HOH . 
O 7 HOH AAA 106 406 50 HOH HOH . 
O 7 HOH AAA 107 407 166 HOH HOH . 
O 7 HOH AAA 108 408 172 HOH HOH . 
O 7 HOH AAA 109 409 75 HOH HOH . 
O 7 HOH AAA 110 410 85 HOH HOH . 
O 7 HOH AAA 111 411 117 HOH HOH . 
O 7 HOH AAA 112 412 148 HOH HOH . 
O 7 HOH AAA 113 413 129 HOH HOH . 
O 7 HOH AAA 114 414 156 HOH HOH . 
O 7 HOH AAA 115 415 36 HOH HOH . 
O 7 HOH AAA 116 416 167 HOH HOH . 
O 7 HOH AAA 117 417 105 HOH HOH . 
O 7 HOH AAA 118 418 100 HOH HOH . 
O 7 HOH AAA 119 419 49 HOH HOH . 
O 7 HOH AAA 120 420 162 HOH HOH . 
O 7 HOH AAA 121 421 164 HOH HOH . 
O 7 HOH AAA 122 422 51 HOH HOH . 
O 7 HOH AAA 123 423 149 HOH HOH . 
O 7 HOH AAA 124 424 23 HOH HOH . 
O 7 HOH AAA 125 425 179 HOH HOH . 
O 7 HOH AAA 126 426 132 HOH HOH . 
O 7 HOH AAA 127 427 31 HOH HOH . 
O 7 HOH AAA 128 428 89 HOH HOH . 
O 7 HOH AAA 129 429 181 HOH HOH . 
O 7 HOH AAA 130 430 17 HOH HOH . 
O 7 HOH AAA 131 431 28 HOH HOH . 
O 7 HOH AAA 132 432 121 HOH HOH . 
O 7 HOH AAA 133 433 66 HOH HOH . 
O 7 HOH AAA 134 434 48 HOH HOH . 
O 7 HOH AAA 135 435 180 HOH HOH . 
O 7 HOH AAA 136 436 163 HOH HOH . 
O 7 HOH AAA 137 437 104 HOH HOH . 
O 7 HOH AAA 138 438 128 HOH HOH . 
O 7 HOH AAA 139 439 143 HOH HOH . 
O 7 HOH AAA 140 440 175 HOH HOH . 
O 7 HOH AAA 141 441 145 HOH HOH . 
O 7 HOH AAA 142 442 169 HOH HOH . 
O 7 HOH AAA 143 443 176 HOH HOH . 
O 7 HOH AAA 144 444 115 HOH HOH . 
O 7 HOH AAA 145 445 3 HOH HOH . 
O 7 HOH AAA 146 446 190 HOH HOH . 
O 7 HOH AAA 147 447 144 HOH HOH . 
O 7 HOH AAA 148 448 58 HOH HOH . 
O 7 HOH AAA 149 449 157 HOH HOH . 
O 7 HOH AAA 150 450 153 HOH HOH . 
O 7 HOH AAA 151 451 170 HOH HOH . 
O 7 HOH AAA 152 452 65 HOH HOH . 
O 7 HOH AAA 153 453 64 HOH HOH . 
O 7 HOH AAA 154 454 183 HOH HOH . 
O 7 HOH AAA 155 455 62 HOH HOH . 
O 7 HOH AAA 156 456 118 HOH HOH . 
O 7 HOH AAA 157 457 60 HOH HOH . 
O 7 HOH AAA 158 458 171 HOH HOH . 
O 7 HOH AAA 159 459 154 HOH HOH . 
O 7 HOH AAA 160 460 123 HOH HOH . 
O 7 HOH AAA 161 461 137 HOH HOH . 
O 7 HOH AAA 162 462 152 HOH HOH . 
O 7 HOH AAA 163 463 71 HOH HOH . 
O 7 HOH AAA 164 464 77 HOH HOH . 
O 7 HOH AAA 165 465 76 HOH HOH . 
O 7 HOH AAA 166 466 165 HOH HOH . 
O 7 HOH AAA 167 467 168 HOH HOH . 
O 7 HOH AAA 168 468 96 HOH HOH . 
O 7 HOH AAA 169 469 160 HOH HOH . 
O 7 HOH AAA 170 470 70 HOH HOH . 
O 7 HOH AAA 171 471 139 HOH HOH . 
O 7 HOH AAA 172 472 119 HOH HOH . 
O 7 HOH AAA 173 473 80 HOH HOH . 
O 7 HOH AAA 174 474 120 HOH HOH . 
O 7 HOH AAA 175 475 140 HOH HOH . 
O 7 HOH AAA 176 476 78 HOH HOH . 
O 7 HOH AAA 177 477 79 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N NO3 . . . H 3 7.928 -10.345 -5.066 1 33.6 ? N NO3 207 AAA 1 
HETATM 2 O O1 NO3 . . . H 3 8.419 -10.335 -3.991 1 50.11 ? O1 NO3 207 AAA 1 
HETATM 3 O O2 NO3 . . . H 3 8.429 -10.381 -6.373 1 47.05 ? O2 NO3 207 AAA 1 
HETATM 4 O O3 NO3 . . . H 3 6.645 -10.026 -5.222 1 28.62 ? O3 NO3 207 AAA 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           247 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           4 
#