data_7PNH # _model_server_result.job_id ObTwgJQOmCXRrfOUUImYlQ _model_server_result.datetime_utc '2024-11-01 06:23:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7pnh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":212}' # _entry.id 7PNH # _exptl.entry_id 7PNH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7PNH _cell.length_a 77.2 _cell.length_b 77.2 _cell.length_c 38.53 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PNH _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id M _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 AAA CYS 6 1_555 A SG CYS 127 AAA CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 30 AAA CYS 30 1_555 A SG CYS 115 AAA CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? disulf ? disulf3 A SG CYS 64 AAA CYS 64 1_555 A SG CYS 80 AAA CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf4 A SG CYS 76 AAA CYS 76 1_555 A SG CYS 94 AAA CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc1 A ND1 HIS 15 AAA HIS 15 1_555 K PT PT . AAA PT 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc2 K PT PT . AAA PT 210 1_555 O O HOH . AAA HOH 332 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? metalc ? metalc3 K PT PT . AAA PT 210 1_555 O O HOH . AAA HOH 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc4 M N1 IMD . AAA IMD 212 1_555 N PT PT . AAA PT 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 195 n y N1 C5 IMD sing 196 n y N1 HN1 IMD sing 197 n n C2 N3 IMD doub 198 n y C2 H2 IMD sing 199 n n N3 C4 IMD sing 200 n y N3 HN3 IMD sing 201 n n C4 C5 IMD doub 202 n y C4 H4 IMD sing 203 n n C5 H5 IMD sing 204 n n # _atom_sites.entry_id 7PNH _atom_sites.fract_transf_matrix[1][1] 0.012953 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012953 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025954 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL AAA 1 201 1 GOL GOL . C 3 NO3 AAA 1 202 1 NO3 NO3 . D 3 NO3 AAA 1 203 2 NO3 NO3 . E 3 NO3 AAA 1 204 3 NO3 NO3 . F 3 NO3 AAA 1 205 4 NO3 NO3 . G 3 NO3 AAA 1 206 5 NO3 NO3 . H 3 NO3 AAA 1 207 7 NO3 NO3 . I 3 NO3 AAA 1 208 9 NO3 NO3 . J 3 NO3 AAA 1 209 10 NO3 NO3 . K 4 PT AAA 1 210 1 PT PT . L 5 DMS AAA 1 211 1 DMS DMS . M 6 IMD AAA 1 212 1 IMD IMD . N 4 PT AAA 1 213 1 PT PT . O 7 HOH AAA 1 301 92 HOH HOH . O 7 HOH AAA 2 302 114 HOH HOH . O 7 HOH AAA 3 303 185 HOH HOH . O 7 HOH AAA 4 304 161 HOH HOH . O 7 HOH AAA 5 305 81 HOH HOH . O 7 HOH AAA 6 306 30 HOH HOH . O 7 HOH AAA 7 307 182 HOH HOH . O 7 HOH AAA 8 308 86 HOH HOH . O 7 HOH AAA 9 309 106 HOH HOH . O 7 HOH AAA 10 310 186 HOH HOH . O 7 HOH AAA 11 311 146 HOH HOH . O 7 HOH AAA 12 312 57 HOH HOH . O 7 HOH AAA 13 313 44 HOH HOH . O 7 HOH AAA 14 314 46 HOH HOH . O 7 HOH AAA 15 315 125 HOH HOH . O 7 HOH AAA 16 316 33 HOH HOH . O 7 HOH AAA 17 317 10 HOH HOH . O 7 HOH AAA 18 318 173 HOH HOH . O 7 HOH AAA 19 319 21 HOH HOH . O 7 HOH AAA 20 320 159 HOH HOH . O 7 HOH AAA 21 321 73 HOH HOH . O 7 HOH AAA 22 322 178 HOH HOH . O 7 HOH AAA 23 323 109 HOH HOH . O 7 HOH AAA 24 324 111 HOH HOH . O 7 HOH AAA 25 325 7 HOH HOH . O 7 HOH AAA 26 326 72 HOH HOH . O 7 HOH AAA 27 327 98 HOH HOH . O 7 HOH AAA 28 328 142 HOH HOH . O 7 HOH AAA 29 329 102 HOH HOH . O 7 HOH AAA 30 330 97 HOH HOH . O 7 HOH AAA 31 331 83 HOH HOH . O 7 HOH AAA 32 332 138 HOH HOH . O 7 HOH AAA 33 333 9 HOH HOH . O 7 HOH AAA 34 334 56 HOH HOH . O 7 HOH AAA 35 335 12 HOH HOH . O 7 HOH AAA 36 336 25 HOH HOH . O 7 HOH AAA 37 337 13 HOH HOH . O 7 HOH AAA 38 338 18 HOH HOH . O 7 HOH AAA 39 339 110 HOH HOH . O 7 HOH AAA 40 340 11 HOH HOH . O 7 HOH AAA 41 341 87 HOH HOH . O 7 HOH AAA 42 342 2 HOH HOH . O 7 HOH AAA 43 343 107 HOH HOH . O 7 HOH AAA 44 344 41 HOH HOH . O 7 HOH AAA 45 345 4 HOH HOH . O 7 HOH AAA 46 346 150 HOH HOH . O 7 HOH AAA 47 347 29 HOH HOH . O 7 HOH AAA 48 348 177 HOH HOH . O 7 HOH AAA 49 349 34 HOH HOH . O 7 HOH AAA 50 350 88 HOH HOH . O 7 HOH AAA 51 351 15 HOH HOH . O 7 HOH AAA 52 352 147 HOH HOH . O 7 HOH AAA 53 353 141 HOH HOH . O 7 HOH AAA 54 354 32 HOH HOH . O 7 HOH AAA 55 355 14 HOH HOH . O 7 HOH AAA 56 356 38 HOH HOH . O 7 HOH AAA 57 357 99 HOH HOH . O 7 HOH AAA 58 358 27 HOH HOH . O 7 HOH AAA 59 359 63 HOH HOH . O 7 HOH AAA 60 360 39 HOH HOH . O 7 HOH AAA 61 361 174 HOH HOH . O 7 HOH AAA 62 362 133 HOH HOH . O 7 HOH AAA 63 363 61 HOH HOH . O 7 HOH AAA 64 364 22 HOH HOH . O 7 HOH AAA 65 365 84 HOH HOH . O 7 HOH AAA 66 366 55 HOH HOH . O 7 HOH AAA 67 367 95 HOH HOH . O 7 HOH AAA 68 368 116 HOH HOH . O 7 HOH AAA 69 369 1 HOH HOH . O 7 HOH AAA 70 370 35 HOH HOH . O 7 HOH AAA 71 371 155 HOH HOH . O 7 HOH AAA 72 372 94 HOH HOH . O 7 HOH AAA 73 373 59 HOH HOH . O 7 HOH AAA 74 374 37 HOH HOH . O 7 HOH AAA 75 375 54 HOH HOH . O 7 HOH AAA 76 376 74 HOH HOH . O 7 HOH AAA 77 377 135 HOH HOH . O 7 HOH AAA 78 378 101 HOH HOH . O 7 HOH AAA 79 379 19 HOH HOH . O 7 HOH AAA 80 380 184 HOH HOH . O 7 HOH AAA 81 381 52 HOH HOH . O 7 HOH AAA 82 382 130 HOH HOH . O 7 HOH AAA 83 383 134 HOH HOH . O 7 HOH AAA 84 384 43 HOH HOH . O 7 HOH AAA 85 385 24 HOH HOH . O 7 HOH AAA 86 386 20 HOH HOH . O 7 HOH AAA 87 387 108 HOH HOH . O 7 HOH AAA 88 388 93 HOH HOH . O 7 HOH AAA 89 389 188 HOH HOH . O 7 HOH AAA 90 390 126 HOH HOH . O 7 HOH AAA 91 391 45 HOH HOH . O 7 HOH AAA 92 392 112 HOH HOH . O 7 HOH AAA 93 393 8 HOH HOH . O 7 HOH AAA 94 394 187 HOH HOH . O 7 HOH AAA 95 395 122 HOH HOH . O 7 HOH AAA 96 396 26 HOH HOH . O 7 HOH AAA 97 397 16 HOH HOH . O 7 HOH AAA 98 398 53 HOH HOH . O 7 HOH AAA 99 399 42 HOH HOH . O 7 HOH AAA 100 400 5 HOH HOH . O 7 HOH AAA 101 401 136 HOH HOH . O 7 HOH AAA 102 402 69 HOH HOH . O 7 HOH AAA 103 403 158 HOH HOH . O 7 HOH AAA 104 404 189 HOH HOH . O 7 HOH AAA 105 405 124 HOH HOH . O 7 HOH AAA 106 406 50 HOH HOH . O 7 HOH AAA 107 407 166 HOH HOH . O 7 HOH AAA 108 408 172 HOH HOH . O 7 HOH AAA 109 409 75 HOH HOH . O 7 HOH AAA 110 410 85 HOH HOH . O 7 HOH AAA 111 411 117 HOH HOH . O 7 HOH AAA 112 412 148 HOH HOH . O 7 HOH AAA 113 413 129 HOH HOH . O 7 HOH AAA 114 414 156 HOH HOH . O 7 HOH AAA 115 415 36 HOH HOH . O 7 HOH AAA 116 416 167 HOH HOH . O 7 HOH AAA 117 417 105 HOH HOH . O 7 HOH AAA 118 418 100 HOH HOH . O 7 HOH AAA 119 419 49 HOH HOH . O 7 HOH AAA 120 420 162 HOH HOH . O 7 HOH AAA 121 421 164 HOH HOH . O 7 HOH AAA 122 422 51 HOH HOH . O 7 HOH AAA 123 423 149 HOH HOH . O 7 HOH AAA 124 424 23 HOH HOH . O 7 HOH AAA 125 425 179 HOH HOH . O 7 HOH AAA 126 426 132 HOH HOH . O 7 HOH AAA 127 427 31 HOH HOH . O 7 HOH AAA 128 428 89 HOH HOH . O 7 HOH AAA 129 429 181 HOH HOH . O 7 HOH AAA 130 430 17 HOH HOH . O 7 HOH AAA 131 431 28 HOH HOH . O 7 HOH AAA 132 432 121 HOH HOH . O 7 HOH AAA 133 433 66 HOH HOH . O 7 HOH AAA 134 434 48 HOH HOH . O 7 HOH AAA 135 435 180 HOH HOH . O 7 HOH AAA 136 436 163 HOH HOH . O 7 HOH AAA 137 437 104 HOH HOH . O 7 HOH AAA 138 438 128 HOH HOH . O 7 HOH AAA 139 439 143 HOH HOH . O 7 HOH AAA 140 440 175 HOH HOH . O 7 HOH AAA 141 441 145 HOH HOH . O 7 HOH AAA 142 442 169 HOH HOH . O 7 HOH AAA 143 443 176 HOH HOH . O 7 HOH AAA 144 444 115 HOH HOH . O 7 HOH AAA 145 445 3 HOH HOH . O 7 HOH AAA 146 446 190 HOH HOH . O 7 HOH AAA 147 447 144 HOH HOH . O 7 HOH AAA 148 448 58 HOH HOH . O 7 HOH AAA 149 449 157 HOH HOH . O 7 HOH AAA 150 450 153 HOH HOH . O 7 HOH AAA 151 451 170 HOH HOH . O 7 HOH AAA 152 452 65 HOH HOH . O 7 HOH AAA 153 453 64 HOH HOH . O 7 HOH AAA 154 454 183 HOH HOH . O 7 HOH AAA 155 455 62 HOH HOH . O 7 HOH AAA 156 456 118 HOH HOH . O 7 HOH AAA 157 457 60 HOH HOH . O 7 HOH AAA 158 458 171 HOH HOH . O 7 HOH AAA 159 459 154 HOH HOH . O 7 HOH AAA 160 460 123 HOH HOH . O 7 HOH AAA 161 461 137 HOH HOH . O 7 HOH AAA 162 462 152 HOH HOH . O 7 HOH AAA 163 463 71 HOH HOH . O 7 HOH AAA 164 464 77 HOH HOH . O 7 HOH AAA 165 465 76 HOH HOH . O 7 HOH AAA 166 466 165 HOH HOH . O 7 HOH AAA 167 467 168 HOH HOH . O 7 HOH AAA 168 468 96 HOH HOH . O 7 HOH AAA 169 469 160 HOH HOH . O 7 HOH AAA 170 470 70 HOH HOH . O 7 HOH AAA 171 471 139 HOH HOH . O 7 HOH AAA 172 472 119 HOH HOH . O 7 HOH AAA 173 473 80 HOH HOH . O 7 HOH AAA 174 474 120 HOH HOH . O 7 HOH AAA 175 475 140 HOH HOH . O 7 HOH AAA 176 476 78 HOH HOH . O 7 HOH AAA 177 477 79 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . M 6 -2.402 -23.529 15.68 0.2 23.62 ? N1 IMD 212 AAA 1 HETATM 2 C C2 IMD . . . M 6 -3.056 -24.526 15.071 0.2 22.9 ? C2 IMD 212 AAA 1 HETATM 3 N N3 IMD . . . M 6 -2.936 -24.363 13.771 0.2 22.88 ? N3 IMD 212 AAA 1 HETATM 4 C C4 IMD . . . M 6 -2.185 -23.247 13.535 0.2 19.55 ? C4 IMD 212 AAA 1 HETATM 5 C C5 IMD . . . M 6 -1.88 -22.704 14.721 0.2 17.32 ? C5 IMD 212 AAA 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 5 #