data_7POE # _model_server_result.job_id 7d2NQlXY6mReL_ujpIDYUA _model_server_result.datetime_utc '2024-11-14 15:28:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7poe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 7POE # _exptl.entry_id 7POE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 496.468 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[[4-[4-[(2-carboxyphenyl)carbamoyl]phenoxy]phenyl]carbonylamino]benzoic acid' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7POE _cell.length_a 105.902 _cell.length_b 105.902 _cell.length_c 83.26 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7POE _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall 'P 4w' _symmetry.space_group_name_H-M 'P 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 F N N ? 2 G N N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id O _struct_conn.ptnr1_label_comp_id GLY _struct_conn.ptnr1_label_seq_id 282 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id GLY _struct_conn.ptnr1_auth_seq_id 282 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id J _struct_conn.ptnr2_label_atom_id K _struct_conn.ptnr2_label_comp_id K _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id K _struct_conn.ptnr2_auth_seq_id 405 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.829 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C28 H20 N2 O7' _chem_comp.formula_weight 496.468 _chem_comp.id 7VK _chem_comp.mon_nstd_flag . _chem_comp.name '2-[[4-[4-[(2-carboxyphenyl)carbamoyl]phenoxy]phenyl]carbonylamino]benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 C7 7VK doub 1 n n C9 C10 7VK doub 2 n y C9 C8 7VK sing 3 n y C10 C11 7VK sing 4 n y C7 C8 7VK sing 5 n n C7 N 7VK sing 6 n n C5 C4 7VK doub 7 n y C5 C6 7VK sing 8 n y C4 C3 7VK sing 9 n y C8 C27 7VK doub 10 n y C11 O3 7VK sing 11 n n C11 C26 7VK doub 12 n y O3 C12 7VK sing 13 n n C27 C26 7VK sing 14 n y N C6 7VK sing 15 n n C3 C2 7VK doub 16 n y C6 C1 7VK doub 17 n y C12 C25 7VK doub 18 n y C12 C13 7VK sing 19 n y C25 C24 7VK sing 20 n y C2 C1 7VK sing 21 n y C1 C 7VK sing 22 n n C13 C14 7VK doub 23 n y C24 C15 7VK doub 24 n y C O1 7VK doub 25 n n C O 7VK sing 26 n n O5 C23 7VK doub 27 n n C14 C15 7VK sing 28 n y C15 C16 7VK sing 29 n n O6 C23 7VK sing 30 n n C23 C22 7VK sing 31 n n N1 C16 7VK sing 32 n n N1 C17 7VK sing 33 n n C16 O4 7VK doub 34 n n C22 C17 7VK doub 35 n y C22 C21 7VK sing 36 n y C17 C18 7VK sing 37 n y C21 C20 7VK doub 38 n y C18 C19 7VK doub 39 n y C20 C19 7VK sing 40 n y C3 H1 7VK sing 41 n n C4 H2 7VK sing 42 n n C5 H3 7VK sing 43 n n C2 H 7VK sing 44 n n C9 H5 7VK sing 45 n n N H4 7VK sing 46 n n O H18 7VK sing 47 n n C10 H6 7VK sing 48 n n C13 H7 7VK sing 49 n n C14 H8 7VK sing 50 n n C18 H10 7VK sing 51 n n C19 H11 7VK sing 52 n n C20 H12 7VK sing 53 n n C21 H13 7VK sing 54 n n C24 H14 7VK sing 55 n n C25 H15 7VK sing 56 n n C26 H16 7VK sing 57 n n C27 H17 7VK sing 58 n n N1 H9 7VK sing 59 n n O6 H19 7VK sing 60 n n # _atom_sites.entry_id 7POE _atom_sites.fract_transf_matrix[1][1] 0.009443 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009443 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012011 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 7VK A 1 401 401 7VK AIN . D 2 7VK A 1 402 403 7VK AIN . E 3 GOL A 1 403 601 GOL GOL . F 2 7VK B 1 401 401 7VK AIN . G 2 7VK B 1 402 403 7VK AIN . H 3 GOL B 1 403 601 GOL GOL . I 3 GOL B 1 404 801 GOL GOL . J 4 K B 1 405 1 K K . K 5 HOH A 1 501 7 HOH HOH . K 5 HOH A 2 502 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 7VK . . . D 2 43.964 26.595 8.414 1 103.36 ? O1 7VK 402 A 1 HETATM 2 C C7 7VK . . . D 2 46.52 25.339 6.129 1 102.11 ? C7 7VK 402 A 1 HETATM 3 O O2 7VK . . . D 2 47.34 24.425 6.142 1 91.57 ? O2 7VK 402 A 1 HETATM 4 C C3 7VK . . . D 2 47.729 25.298 11.064 1 115.38 ? C3 7VK 402 A 1 HETATM 5 C C4 7VK . . . D 2 48.574 25.282 9.976 1 108.42 ? C4 7VK 402 A 1 HETATM 6 C C5 7VK . . . D 2 48.092 25.564 8.71 1 100.73 ? C5 7VK 402 A 1 HETATM 7 C C6 7VK . . . D 2 46.742 25.864 8.525 1 111.14 ? C6 7VK 402 A 1 HETATM 8 C C1 7VK . . . D 2 45.877 25.902 9.639 1 118.34 ? C1 7VK 402 A 1 HETATM 9 C C2 7VK . . . D 2 46.388 25.607 10.904 1 114.45 ? C2 7VK 402 A 1 HETATM 10 O O3 7VK . . . D 2 43.76 26.307 1.273 1 93.92 ? O3 7VK 402 A 1 HETATM 11 C C8 7VK . . . D 2 45.789 25.694 4.872 1 94.92 ? C8 7VK 402 A 1 HETATM 12 O O4 7VK . . . D 2 38.128 29.38 1.438 1 89.59 ? O4 7VK 402 A 1 HETATM 13 C C9 7VK . . . D 2 44.594 26.408 4.864 1 101.53 ? C9 7VK 402 A 1 HETATM 14 N N 7VK . . . D 2 46.214 26.071 7.227 1 115.39 ? N 7VK 402 A 1 HETATM 15 C C 7VK . . . D 2 44.42 26.284 9.538 1 107.43 ? C 7VK 402 A 1 HETATM 16 O O 7VK . . . D 2 43.74 26.267 10.597 1 90.81 ? O 7VK 402 A 1 HETATM 17 C C10 7VK . . . D 2 43.916 26.641 3.681 1 102.69 ? C10 7VK 402 A 1 HETATM 18 C C11 7VK . . . D 2 44.43 26.157 2.488 1 99.13 ? C11 7VK 402 A 1 HETATM 19 C C12 7VK . . . D 2 42.601 27.077 1.185 1 98.64 ? C12 7VK 402 A 1 HETATM 20 C C13 7VK . . . D 2 41.399 26.615 1.697 1 91.45 ? C13 7VK 402 A 1 HETATM 21 C C14 7VK . . . D 2 40.249 27.364 1.529 1 93.46 ? C14 7VK 402 A 1 HETATM 22 C C15 7VK . . . D 2 40.283 28.578 0.85 1 101.17 ? C15 7VK 402 A 1 HETATM 23 C C16 7VK . . . D 2 39.03 29.357 0.605 1 92.07 ? C16 7VK 402 A 1 HETATM 24 C C17 7VK . . . D 2 37.919 30.806 -1.093 1 91.33 ? C17 7VK 402 A 1 HETATM 25 C C18 7VK . . . D 2 36.744 31.014 -0.373 1 91.95 ? C18 7VK 402 A 1 HETATM 26 C C19 7VK . . . D 2 35.74 31.809 -0.897 1 85.26 ? C19 7VK 402 A 1 HETATM 27 C C20 7VK . . . D 2 35.893 32.403 -2.131 1 91.03 ? C20 7VK 402 A 1 HETATM 28 C C21 7VK . . . D 2 37.052 32.207 -2.863 1 99.17 ? C21 7VK 402 A 1 HETATM 29 C C22 7VK . . . D 2 38.076 31.405 -2.361 1 93.68 ? C22 7VK 402 A 1 HETATM 30 C C23 7VK . . . D 2 39.307 31.218 -3.215 1 98.25 ? C23 7VK 402 A 1 HETATM 31 C C24 7VK . . . D 2 41.501 29.037 0.36 1 109.18 ? C24 7VK 402 A 1 HETATM 32 C C25 7VK . . . D 2 42.656 28.294 0.525 1 109.02 ? C25 7VK 402 A 1 HETATM 33 C C26 7VK . . . D 2 45.629 25.464 2.477 1 94.3 ? C26 7VK 402 A 1 HETATM 34 C C27 7VK . . . D 2 46.301 25.236 3.663 1 93.13 ? C27 7VK 402 A 1 HETATM 35 N N1 7VK . . . D 2 38.973 30.013 -0.581 1 91.61 ? N1 7VK 402 A 1 HETATM 36 O O5 7VK . . . D 2 40.227 30.49 -2.776 1 95.49 ? O5 7VK 402 A 1 HETATM 37 O O6 7VK . . . D 2 39.336 31.802 -4.329 1 104.94 ? O6 7VK 402 A 1 HETATM 38 H H1 7VK . . . D 2 48.108 25.068 12.058 1 140.01 ? H1 7VK 402 A 1 HETATM 39 H H2 7VK . . . D 2 49.628 25.047 10.117 1 131.66 ? H2 7VK 402 A 1 HETATM 40 H H3 7VK . . . D 2 48.802 25.54 7.885 1 122.43 ? H3 7VK 402 A 1 HETATM 41 H H 7VK . . . D 2 45.723 25.621 11.766 1 138.9 ? H 7VK 402 A 1 HETATM 42 H H5 7VK . . . D 2 44.187 26.789 5.8 1 123.39 ? H5 7VK 402 A 1 HETATM 43 H H4 7VK . . . D 2 45.562 26.849 7.205 1 140.03 ? H4 7VK 402 A 1 HETATM 44 H H6 7VK . . . D 2 42.982 27.201 3.68 1 124.78 ? H6 7VK 402 A 1 HETATM 45 H H7 7VK . . . D 2 41.361 25.665 2.23 1 111.29 ? H7 7VK 402 A 1 HETATM 46 H H8 7VK . . . D 2 39.306 27 1.934 1 113.7 ? H8 7VK 402 A 1 HETATM 47 H H10 7VK . . . D 2 36.568 30.572 0.607 1 111.89 ? H10 7VK 402 A 1 HETATM 48 H H11 7VK . . . D 2 34.826 31.962 -0.325 1 103.87 ? H11 7VK 402 A 1 HETATM 49 H H12 7VK . . . D 2 35.099 33.03 -2.532 1 110.8 ? H12 7VK 402 A 1 HETATM 50 H H13 7VK . . . D 2 37.16 32.682 -3.837 1 120.56 ? H13 7VK 402 A 1 HETATM 51 H H14 7VK . . . D 2 41.557 29.991 -0.162 1 132.57 ? H14 7VK 402 A 1 HETATM 52 H H15 7VK . . . D 2 43.607 28.66 0.14 1 132.38 ? H15 7VK 402 A 1 HETATM 53 H H16 7VK . . . D 2 46.043 25.099 1.538 1 114.72 ? H16 7VK 402 A 1 HETATM 54 H H17 7VK . . . D 2 47.243 24.69 3.635 1 113.31 ? H17 7VK 402 A 1 HETATM 55 H H9 7VK . . . D 2 39.742 29.984 -1.243 1 111.49 ? H9 7VK 402 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 210 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 55 #