data_7POJ # _model_server_result.job_id WcZXvMV1WduyDNZmqv6NRw _model_server_result.datetime_utc '2025-07-07 23:28:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7poj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 7POJ # _exptl.entry_id 7POJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7POJ _cell.length_a 143.351 _cell.length_b 144.108 _cell.length_c 82.129 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7POJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 323 1_555 A SG CYS 73 A CYS 389 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 36 A CYS 352 1_555 A SG CYS 105 A CYS 421 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 A SG CYS 40 A CYS 356 1_555 A SG CYS 107 A CYS 423 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 A SG CYS 72 A CYS 388 1_555 B SG CYS 72 B CYS 388 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf5 B SG CYS 7 B CYS 323 1_555 B SG CYS 73 B CYS 389 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf6 B SG CYS 36 B CYS 352 1_555 B SG CYS 105 B CYS 421 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf7 B SG CYS 40 B CYS 356 1_555 B SG CYS 107 B CYS 423 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? covale ? covale1 C ND2 ASN 110 C ASN 131 1_555 F C1 NAG . C NAG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale2 D ND2 ASN 110 D ASN 131 1_555 G C1 NAG . D NAG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 267 n n O1 HO1 PG4 sing 268 n n C1 C2 PG4 sing 269 n n C1 H11 PG4 sing 270 n n C1 H12 PG4 sing 271 n n C2 O2 PG4 sing 272 n n C2 H21 PG4 sing 273 n n C2 H22 PG4 sing 274 n n O2 C3 PG4 sing 275 n n C3 C4 PG4 sing 276 n n C3 H31 PG4 sing 277 n n C3 H32 PG4 sing 278 n n C4 O3 PG4 sing 279 n n C4 H41 PG4 sing 280 n n C4 H42 PG4 sing 281 n n O3 C5 PG4 sing 282 n n C5 C6 PG4 sing 283 n n C5 H51 PG4 sing 284 n n C5 H52 PG4 sing 285 n n C6 O4 PG4 sing 286 n n C6 H61 PG4 sing 287 n n C6 H62 PG4 sing 288 n n O4 C7 PG4 sing 289 n n C7 C8 PG4 sing 290 n n C7 H71 PG4 sing 291 n n C7 H72 PG4 sing 292 n n C8 O5 PG4 sing 293 n n C8 H81 PG4 sing 294 n n C8 H82 PG4 sing 295 n n O5 HO5 PG4 sing 296 n n # _atom_sites.entry_id 7POJ _atom_sites.fract_transf_matrix[1][1] 0.006976 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006939 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012176 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 PG4 A 1 501 1 PG4 PG4 . F 4 NAG C 1 401 301 NAG NAG . G 4 NAG D 1 401 301 NAG NAG . H 5 HOH A 1 601 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . E 3 55.426 48.225 10.567 1 145.57 ? O1 PG4 501 A 1 HETATM 2 C C1 PG4 . . . E 3 56.23 48.469 9.41 1 144.96 ? C1 PG4 501 A 1 HETATM 3 C C2 PG4 . . . E 3 55.937 47.403 8.353 1 143.82 ? C2 PG4 501 A 1 HETATM 4 O O2 PG4 . . . E 3 54.557 47.447 7.977 1 144.18 ? O2 PG4 501 A 1 HETATM 5 C C3 PG4 . . . E 3 54.281 48.652 7.257 1 143.32 ? C3 PG4 501 A 1 HETATM 6 C C4 PG4 . . . E 3 52.896 48.546 6.608 1 141.91 ? C4 PG4 501 A 1 HETATM 7 O O3 PG4 . . . E 3 52.586 49.732 5.866 1 140 ? O3 PG4 501 A 1 HETATM 8 C C5 PG4 . . . E 3 53.654 50.037 4.96 1 138.41 ? C5 PG4 501 A 1 HETATM 9 C C6 PG4 . . . E 3 53.117 50.761 3.723 1 135.52 ? C6 PG4 501 A 1 HETATM 10 O O4 PG4 . . . E 3 52.177 49.916 3.049 1 134.57 ? O4 PG4 501 A 1 HETATM 11 C C7 PG4 . . . E 3 50.852 50.446 3.148 1 134.08 ? C7 PG4 501 A 1 HETATM 12 C C8 PG4 . . . E 3 50.772 51.772 2.388 1 133.06 ? C8 PG4 501 A 1 HETATM 13 O O5 PG4 . . . E 3 49.447 52.299 2.486 1 132.71 ? O5 PG4 501 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 360 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #