data_7PPX
#
_model_server_result.job_id            ZKABDCi9w7vMvZLLxyluCA 
_model_server_result.datetime_utc      '2024-10-18 16:24:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ppx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":1209}' 
#
_entry.id    7PPX 
#
_exptl.entry_id    7PPX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7PPX 
_cell.length_a            79.205 
_cell.length_b            79.205 
_cell.length_c            137.91 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7PPX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 E N N 
? 5 F N N 
? 5 G N N 
? 5 H N N 
? 5 I N N 
? 5 J N N 
? 5 K N N 
? 5 L N N 
? 5 M N N 
? 5 N N N 
? 5 O N N 
? 5 P N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 91 n n 
C1 C2 EDO sing 92 n n 
C1 H11 EDO sing 93 n n 
C1 H12 EDO sing 94 n n 
O1 HO1 EDO sing 95 n n 
C2 O2 EDO sing 96 n n 
C2 H21 EDO sing 97 n n 
C2 H22 EDO sing 98 n n 
O2 HO2 EDO sing 99 n n 
#
_atom_sites.entry_id                     7PPX 
_atom_sites.fract_transf_matrix[1][1]    0.012625 
_atom_sites.fract_transf_matrix[1][2]    0.007289 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014579 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007251 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 AAA 1 1201 1 SO4 SO4 . 
C 3 CL AAA 1 1202 1109 CL CL . 
D 4 7ZX AAA 1 1203 1701 7ZX DRG . 
E 5 EDO AAA 1 1204 1 EDO EDO . 
F 5 EDO AAA 1 1205 2 EDO EDO . 
G 5 EDO AAA 1 1206 3 EDO EDO . 
H 5 EDO AAA 1 1207 4 EDO EDO . 
I 5 EDO AAA 1 1208 5 EDO EDO . 
J 5 EDO AAA 1 1209 6 EDO EDO . 
K 5 EDO AAA 1 1210 7 EDO EDO . 
L 5 EDO AAA 1 1211 8 EDO EDO . 
M 5 EDO AAA 1 1212 9 EDO EDO . 
N 5 EDO AAA 1 1213 10 EDO EDO . 
O 5 EDO AAA 1 1214 11 EDO EDO . 
P 5 EDO AAA 1 1215 12 EDO EDO . 
Q 2 SO4 AAA 1 1216 1 SO4 SO4 . 
R 6 HOH AAA 1 1301 241 HOH HOH . 
R 6 HOH AAA 2 1302 213 HOH HOH . 
R 6 HOH AAA 3 1303 149 HOH HOH . 
R 6 HOH AAA 4 1304 176 HOH HOH . 
R 6 HOH AAA 5 1305 166 HOH HOH . 
R 6 HOH AAA 6 1306 63 HOH HOH . 
R 6 HOH AAA 7 1307 150 HOH HOH . 
R 6 HOH AAA 8 1308 215 HOH HOH . 
R 6 HOH AAA 9 1309 175 HOH HOH . 
R 6 HOH AAA 10 1310 49 HOH HOH . 
R 6 HOH AAA 11 1311 73 HOH HOH . 
R 6 HOH AAA 12 1312 226 HOH HOH . 
R 6 HOH AAA 13 1313 185 HOH HOH . 
R 6 HOH AAA 14 1314 159 HOH HOH . 
R 6 HOH AAA 15 1315 207 HOH HOH . 
R 6 HOH AAA 16 1316 54 HOH HOH . 
R 6 HOH AAA 17 1317 104 HOH HOH . 
R 6 HOH AAA 18 1318 100 HOH HOH . 
R 6 HOH AAA 19 1319 239 HOH HOH . 
R 6 HOH AAA 20 1320 23 HOH HOH . 
R 6 HOH AAA 21 1321 17 HOH HOH . 
R 6 HOH AAA 22 1322 124 HOH HOH . 
R 6 HOH AAA 23 1323 31 HOH HOH . 
R 6 HOH AAA 24 1324 57 HOH HOH . 
R 6 HOH AAA 25 1325 157 HOH HOH . 
R 6 HOH AAA 26 1326 59 HOH HOH . 
R 6 HOH AAA 27 1327 15 HOH HOH . 
R 6 HOH AAA 28 1328 24 HOH HOH . 
R 6 HOH AAA 29 1329 193 HOH HOH . 
R 6 HOH AAA 30 1330 135 HOH HOH . 
R 6 HOH AAA 31 1331 158 HOH HOH . 
R 6 HOH AAA 32 1332 97 HOH HOH . 
R 6 HOH AAA 33 1333 42 HOH HOH . 
R 6 HOH AAA 34 1334 14 HOH HOH . 
R 6 HOH AAA 35 1335 245 HOH HOH . 
R 6 HOH AAA 36 1336 51 HOH HOH . 
R 6 HOH AAA 37 1337 77 HOH HOH . 
R 6 HOH AAA 38 1338 122 HOH HOH . 
R 6 HOH AAA 39 1339 164 HOH HOH . 
R 6 HOH AAA 40 1340 18 HOH HOH . 
R 6 HOH AAA 41 1341 244 HOH HOH . 
R 6 HOH AAA 42 1342 32 HOH HOH . 
R 6 HOH AAA 43 1343 234 HOH HOH . 
R 6 HOH AAA 44 1344 12 HOH HOH . 
R 6 HOH AAA 45 1345 1 HOH HOH . 
R 6 HOH AAA 46 1346 39 HOH HOH . 
R 6 HOH AAA 47 1347 55 HOH HOH . 
R 6 HOH AAA 48 1348 114 HOH HOH . 
R 6 HOH AAA 49 1349 246 HOH HOH . 
R 6 HOH AAA 50 1350 37 HOH HOH . 
R 6 HOH AAA 51 1351 139 HOH HOH . 
R 6 HOH AAA 52 1352 58 HOH HOH . 
R 6 HOH AAA 53 1353 8 HOH HOH . 
R 6 HOH AAA 54 1354 170 HOH HOH . 
R 6 HOH AAA 55 1355 161 HOH HOH . 
R 6 HOH AAA 56 1356 69 HOH HOH . 
R 6 HOH AAA 57 1357 2 HOH HOH . 
R 6 HOH AAA 58 1358 72 HOH HOH . 
R 6 HOH AAA 59 1359 13 HOH HOH . 
R 6 HOH AAA 60 1360 48 HOH HOH . 
R 6 HOH AAA 61 1361 33 HOH HOH . 
R 6 HOH AAA 62 1362 173 HOH HOH . 
R 6 HOH AAA 63 1363 61 HOH HOH . 
R 6 HOH AAA 64 1364 26 HOH HOH . 
R 6 HOH AAA 65 1365 110 HOH HOH . 
R 6 HOH AAA 66 1366 36 HOH HOH . 
R 6 HOH AAA 67 1367 107 HOH HOH . 
R 6 HOH AAA 68 1368 89 HOH HOH . 
R 6 HOH AAA 69 1369 11 HOH HOH . 
R 6 HOH AAA 70 1370 113 HOH HOH . 
R 6 HOH AAA 71 1371 43 HOH HOH . 
R 6 HOH AAA 72 1372 40 HOH HOH . 
R 6 HOH AAA 73 1373 128 HOH HOH . 
R 6 HOH AAA 74 1374 174 HOH HOH . 
R 6 HOH AAA 75 1375 222 HOH HOH . 
R 6 HOH AAA 76 1376 90 HOH HOH . 
R 6 HOH AAA 77 1377 98 HOH HOH . 
R 6 HOH AAA 78 1378 35 HOH HOH . 
R 6 HOH AAA 79 1379 199 HOH HOH . 
R 6 HOH AAA 80 1380 169 HOH HOH . 
R 6 HOH AAA 81 1381 19 HOH HOH . 
R 6 HOH AAA 82 1382 197 HOH HOH . 
R 6 HOH AAA 83 1383 83 HOH HOH . 
R 6 HOH AAA 84 1384 211 HOH HOH . 
R 6 HOH AAA 85 1385 29 HOH HOH . 
R 6 HOH AAA 86 1386 41 HOH HOH . 
R 6 HOH AAA 87 1387 147 HOH HOH . 
R 6 HOH AAA 88 1388 129 HOH HOH . 
R 6 HOH AAA 89 1389 87 HOH HOH . 
R 6 HOH AAA 90 1390 93 HOH HOH . 
R 6 HOH AAA 91 1391 20 HOH HOH . 
R 6 HOH AAA 92 1392 80 HOH HOH . 
R 6 HOH AAA 93 1393 3 HOH HOH . 
R 6 HOH AAA 94 1394 121 HOH HOH . 
R 6 HOH AAA 95 1395 21 HOH HOH . 
R 6 HOH AAA 96 1396 4 HOH HOH . 
R 6 HOH AAA 97 1397 78 HOH HOH . 
R 6 HOH AAA 98 1398 38 HOH HOH . 
R 6 HOH AAA 99 1399 50 HOH HOH . 
R 6 HOH AAA 100 1400 34 HOH HOH . 
R 6 HOH AAA 101 1401 53 HOH HOH . 
R 6 HOH AAA 102 1402 203 HOH HOH . 
R 6 HOH AAA 103 1403 66 HOH HOH . 
R 6 HOH AAA 104 1404 64 HOH HOH . 
R 6 HOH AAA 105 1405 145 HOH HOH . 
R 6 HOH AAA 106 1406 123 HOH HOH . 
R 6 HOH AAA 107 1407 132 HOH HOH . 
R 6 HOH AAA 108 1408 52 HOH HOH . 
R 6 HOH AAA 109 1409 79 HOH HOH . 
R 6 HOH AAA 110 1410 236 HOH HOH . 
R 6 HOH AAA 111 1411 235 HOH HOH . 
R 6 HOH AAA 112 1412 127 HOH HOH . 
R 6 HOH AAA 113 1413 117 HOH HOH . 
R 6 HOH AAA 114 1414 240 HOH HOH . 
R 6 HOH AAA 115 1415 182 HOH HOH . 
R 6 HOH AAA 116 1416 105 HOH HOH . 
R 6 HOH AAA 117 1417 242 HOH HOH . 
R 6 HOH AAA 118 1418 74 HOH HOH . 
R 6 HOH AAA 119 1419 231 HOH HOH . 
R 6 HOH AAA 120 1420 243 HOH HOH . 
R 6 HOH AAA 121 1421 216 HOH HOH . 
R 6 HOH AAA 122 1422 108 HOH HOH . 
R 6 HOH AAA 123 1423 188 HOH HOH . 
R 6 HOH AAA 124 1424 155 HOH HOH . 
R 6 HOH AAA 125 1425 86 HOH HOH . 
R 6 HOH AAA 126 1426 238 HOH HOH . 
R 6 HOH AAA 127 1427 225 HOH HOH . 
R 6 HOH AAA 128 1428 172 HOH HOH . 
R 6 HOH AAA 129 1429 106 HOH HOH . 
R 6 HOH AAA 130 1430 85 HOH HOH . 
R 6 HOH AAA 131 1431 16 HOH HOH . 
R 6 HOH AAA 132 1432 227 HOH HOH . 
R 6 HOH AAA 133 1433 28 HOH HOH . 
R 6 HOH AAA 134 1434 237 HOH HOH . 
R 6 HOH AAA 135 1435 30 HOH HOH . 
R 6 HOH AAA 136 1436 82 HOH HOH . 
R 6 HOH AAA 137 1437 112 HOH HOH . 
R 6 HOH AAA 138 1438 184 HOH HOH . 
R 6 HOH AAA 139 1439 27 HOH HOH . 
R 6 HOH AAA 140 1440 168 HOH HOH . 
R 6 HOH AAA 141 1441 219 HOH HOH . 
R 6 HOH AAA 142 1442 143 HOH HOH . 
R 6 HOH AAA 143 1443 198 HOH HOH . 
R 6 HOH AAA 144 1444 99 HOH HOH . 
R 6 HOH AAA 145 1445 62 HOH HOH . 
R 6 HOH AAA 146 1446 247 HOH HOH . 
R 6 HOH AAA 147 1447 186 HOH HOH . 
R 6 HOH AAA 148 1448 141 HOH HOH . 
R 6 HOH AAA 149 1449 5 HOH HOH . 
R 6 HOH AAA 150 1450 136 HOH HOH . 
R 6 HOH AAA 151 1451 154 HOH HOH . 
R 6 HOH AAA 152 1452 248 HOH HOH . 
R 6 HOH AAA 153 1453 230 HOH HOH . 
R 6 HOH AAA 154 1454 165 HOH HOH . 
R 6 HOH AAA 155 1455 46 HOH HOH . 
R 6 HOH AAA 156 1456 60 HOH HOH . 
R 6 HOH AAA 157 1457 45 HOH HOH . 
R 6 HOH AAA 158 1458 205 HOH HOH . 
R 6 HOH AAA 159 1459 163 HOH HOH . 
R 6 HOH AAA 160 1460 232 HOH HOH . 
R 6 HOH AAA 161 1461 44 HOH HOH . 
R 6 HOH AAA 162 1462 148 HOH HOH . 
R 6 HOH AAA 163 1463 116 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . J 5 -15.186 29.366 3.459 1 44.6 ? C1 EDO 1209 AAA 1 
HETATM 2 O O1 EDO . . . J 5 -15.751 28.455 2.521 1 45.82 ? O1 EDO 1209 AAA 1 
HETATM 3 C C2 EDO . . . J 5 -13.981 28.89 4.184 1 53.39 ? C2 EDO 1209 AAA 1 
HETATM 4 O O2 EDO . . . J 5 -13.9 27.481 4.276 1 61.7 ? O2 EDO 1209 AAA 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           322 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#