data_7PQI
#
_model_server_result.job_id            9ErZ7UF3wFZ2E6JetJ2OFA 
_model_server_result.datetime_utc      '2024-12-29 18:33:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7pqi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    7PQI 
#
_exptl.entry_id    7PQI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              612.624 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            NOVOBIOCIN 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7PQI 
_cell.length_a            42.869 
_cell.length_b            42.869 
_cell.length_c            256.192 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7PQI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C31 H36 N2 O11' 
_chem_comp.formula_weight    612.624 
_chem_comp.id                NOV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              NOVOBIOCIN 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '4-Hydroxy-3-[4-hydroxy-3-(3-methylbut-2-enyl)benzamido]-8-methylcoumarin-7-yl 3-O-carbamoyl-5,5-di-C-methyl-alpha-l-lyxofuranoside' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 NOV sing 246 n n 
C1 H11A NOV sing 247 n n 
C1 H12 NOV sing 248 n n 
C1 H13 NOV sing 249 n n 
O1 C27 NOV sing 250 n n 
N1 C12 NOV sing 251 n n 
N1 HN11 NOV sing 252 n n 
N1 HN12 NOV sing 253 n n 
C12 O4 NOV doub 254 n n 
C12 O5 NOV sing 255 n n 
O5 C28 NOV sing 256 n n 
C27 C28 NOV sing 257 n n 
C27 C31 NOV sing 258 n n 
C27 H27 NOV sing 259 n n 
C28 C29 NOV sing 260 n n 
C28 H28 NOV sing 261 n n 
C29 O6 NOV sing 262 n n 
C29 C30 NOV sing 263 n n 
C29 H29 NOV sing 264 n n 
O6 HO6 NOV sing 265 n n 
C30 O7 NOV sing 266 n n 
C30 O8 NOV sing 267 n n 
C30 H30 NOV sing 268 n n 
O7 C31 NOV sing 269 n n 
C31 C23 NOV sing 270 n n 
C31 C26 NOV sing 271 n n 
C23 H231 NOV sing 272 n n 
C23 H232 NOV sing 273 n n 
C23 H233 NOV sing 274 n n 
C26 H261 NOV sing 275 n n 
C26 H262 NOV sing 276 n n 
C26 H263 NOV sing 277 n n 
O8 C3 NOV sing 278 n n 
C3 C4 NOV doub 279 n y 
C3 C11 NOV sing 280 n y 
C4 C2 NOV sing 281 n n 
C4 C5 NOV sing 282 n y 
C2 H21A NOV sing 283 n n 
C2 H22 NOV sing 284 n n 
C2 H23 NOV sing 285 n n 
C5 C9 NOV doub 286 n y 
C5 O10 NOV sing 287 n n 
C9 C10 NOV sing 288 n y 
C9 C8 NOV sing 289 n n 
C10 C11 NOV doub 290 n y 
C10 H10 NOV sing 291 n n 
C11 H11 NOV sing 292 n n 
O10 C6 NOV sing 293 n n 
C6 O11 NOV doub 294 n n 
C6 C7 NOV sing 295 n n 
C7 C8 NOV doub 296 n n 
C7 N2 NOV sing 297 n n 
C8 O9 NOV sing 298 n n 
O9 HO9 NOV sing 299 n n 
N2 C13 NOV sing 300 n n 
N2 HN2 NOV sing 301 n n 
C13 O2 NOV doub 302 n n 
C13 C14 NOV sing 303 n n 
C14 C15 NOV doub 304 n y 
C14 C19 NOV sing 305 n y 
C15 C16 NOV sing 306 n y 
C15 H15 NOV sing 307 n n 
C16 C17 NOV doub 308 n y 
C16 C20 NOV sing 309 n n 
C17 O3 NOV sing 310 n n 
C17 C18 NOV sing 311 n y 
O3 HO3 NOV sing 312 n n 
C18 C19 NOV doub 313 n y 
C18 H18 NOV sing 314 n n 
C19 H19 NOV sing 315 n n 
C20 C21 NOV sing 316 n n 
C20 H201 NOV sing 317 n n 
C20 H202 NOV sing 318 n n 
C21 C22 NOV doub 319 n n 
C21 H21 NOV sing 320 n n 
C22 C24 NOV sing 321 n n 
C22 C25 NOV sing 322 n n 
C24 H241 NOV sing 323 n n 
C24 H242 NOV sing 324 n n 
C24 H243 NOV sing 325 n n 
C25 H251 NOV sing 326 n n 
C25 H252 NOV sing 327 n n 
C25 H253 NOV sing 328 n n 
#
_atom_sites.entry_id                     7PQI 
_atom_sites.fract_transf_matrix[1][1]    0.023327 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023327 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003903 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NOV A 1 301 301 NOV NOV . 
C 3 EDO A 1 302 302 EDO EDO . 
D 3 EDO A 1 303 303 EDO EDO . 
E 3 EDO A 1 304 304 EDO EDO . 
F 3 EDO A 1 305 305 EDO EDO . 
G 3 EDO A 1 306 306 EDO EDO . 
H 4 HOH A 1 401 70 HOH HOH . 
H 4 HOH A 2 402 37 HOH HOH . 
H 4 HOH A 3 403 63 HOH HOH . 
H 4 HOH A 4 404 17 HOH HOH . 
H 4 HOH A 5 405 58 HOH HOH . 
H 4 HOH A 6 406 9 HOH HOH . 
H 4 HOH A 7 407 29 HOH HOH . 
H 4 HOH A 8 408 68 HOH HOH . 
H 4 HOH A 9 409 30 HOH HOH . 
H 4 HOH A 10 410 10 HOH HOH . 
H 4 HOH A 11 411 28 HOH HOH . 
H 4 HOH A 12 412 65 HOH HOH . 
H 4 HOH A 13 413 48 HOH HOH . 
H 4 HOH A 14 414 11 HOH HOH . 
H 4 HOH A 15 415 62 HOH HOH . 
H 4 HOH A 16 416 32 HOH HOH . 
H 4 HOH A 17 417 20 HOH HOH . 
H 4 HOH A 18 418 56 HOH HOH . 
H 4 HOH A 19 419 16 HOH HOH . 
H 4 HOH A 20 420 26 HOH HOH . 
H 4 HOH A 21 421 12 HOH HOH . 
H 4 HOH A 22 422 13 HOH HOH . 
H 4 HOH A 23 423 4 HOH HOH . 
H 4 HOH A 24 424 47 HOH HOH . 
H 4 HOH A 25 425 23 HOH HOH . 
H 4 HOH A 26 426 33 HOH HOH . 
H 4 HOH A 27 427 18 HOH HOH . 
H 4 HOH A 28 428 57 HOH HOH . 
H 4 HOH A 29 429 15 HOH HOH . 
H 4 HOH A 30 430 19 HOH HOH . 
H 4 HOH A 31 431 69 HOH HOH . 
H 4 HOH A 32 432 66 HOH HOH . 
H 4 HOH A 33 433 35 HOH HOH . 
H 4 HOH A 34 434 38 HOH HOH . 
H 4 HOH A 35 435 43 HOH HOH . 
H 4 HOH A 36 436 27 HOH HOH . 
H 4 HOH A 37 437 5 HOH HOH . 
H 4 HOH A 38 438 25 HOH HOH . 
H 4 HOH A 39 439 53 HOH HOH . 
H 4 HOH A 40 440 61 HOH HOH . 
H 4 HOH A 41 441 21 HOH HOH . 
H 4 HOH A 42 442 46 HOH HOH . 
H 4 HOH A 43 443 39 HOH HOH . 
H 4 HOH A 44 444 8 HOH HOH . 
H 4 HOH A 45 445 2 HOH HOH . 
H 4 HOH A 46 446 51 HOH HOH . 
H 4 HOH A 47 447 41 HOH HOH . 
H 4 HOH A 48 448 34 HOH HOH . 
H 4 HOH A 49 449 22 HOH HOH . 
H 4 HOH A 50 450 3 HOH HOH . 
H 4 HOH A 51 451 54 HOH HOH . 
H 4 HOH A 52 452 6 HOH HOH . 
H 4 HOH A 53 453 64 HOH HOH . 
H 4 HOH A 54 454 24 HOH HOH . 
H 4 HOH A 55 455 67 HOH HOH . 
H 4 HOH A 56 456 14 HOH HOH . 
H 4 HOH A 57 457 31 HOH HOH . 
H 4 HOH A 58 458 40 HOH HOH . 
H 4 HOH A 59 459 50 HOH HOH . 
H 4 HOH A 60 460 1 HOH HOH . 
H 4 HOH A 61 461 60 HOH HOH . 
H 4 HOH A 62 462 7 HOH HOH . 
H 4 HOH A 63 463 44 HOH HOH . 
H 4 HOH A 64 464 59 HOH HOH . 
H 4 HOH A 65 465 45 HOH HOH . 
H 4 HOH A 66 466 55 HOH HOH . 
H 4 HOH A 67 467 49 HOH HOH . 
H 4 HOH A 68 468 42 HOH HOH . 
H 4 HOH A 69 469 36 HOH HOH . 
H 4 HOH A 70 470 52 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NOV . . . B 2 15.912 9.444 24.876 1 27.4 ? C1 NOV 301 A 1 
HETATM 2 O O1 NOV . . . B 2 15.938 10.738 25.474 1 25.62 ? O1 NOV 301 A 1 
HETATM 3 N N1 NOV . . . B 2 16.206 12.205 21.048 1 29.81 ? N1 NOV 301 A 1 
HETATM 4 C C12 NOV . . . B 2 15.945 12.862 22.197 1 28.93 ? C12 NOV 301 A 1 
HETATM 5 O O4 NOV . . . B 2 16.317 13.999 22.418 1 28.33 ? O4 NOV 301 A 1 
HETATM 6 O O5 NOV . . . B 2 15.193 12.093 23.036 1 27.77 ? O5 NOV 301 A 1 
HETATM 7 C C27 NOV . . . B 2 14.727 11.473 25.347 1 27.03 ? C27 NOV 301 A 1 
HETATM 8 C C28 NOV . . . B 2 14.92 12.615 24.352 1 26.7 ? C28 NOV 301 A 1 
HETATM 9 C C29 NOV . . . B 2 13.673 13.459 24.263 1 25.92 ? C29 NOV 301 A 1 
HETATM 10 O O6 NOV . . . B 2 12.549 12.706 23.827 1 26.53 ? O6 NOV 301 A 1 
HETATM 11 C C30 NOV . . . B 2 13.392 14.024 25.64 1 26.15 ? C30 NOV 301 A 1 
HETATM 12 O O7 NOV . . . B 2 13.23 12.974 26.588 1 25.24 ? O7 NOV 301 A 1 
HETATM 13 C C31 NOV . . . B 2 14.312 12 26.721 1 25.76 ? C31 NOV 301 A 1 
HETATM 14 C C23 NOV . . . B 2 15.485 12.649 27.444 1 25.13 ? C23 NOV 301 A 1 
HETATM 15 C C26 NOV . . . B 2 13.721 10.896 27.597 1 25.68 ? C26 NOV 301 A 1 
HETATM 16 O O8 NOV . . . B 2 14.518 14.813 25.913 1 26.67 ? O8 NOV 301 A 1 
HETATM 17 C C3 NOV . . . B 2 14.45 15.778 26.895 1 28.34 ? C3 NOV 301 A 1 
HETATM 18 C C4 NOV . . . B 2 15.506 16.688 26.901 1 29.56 ? C4 NOV 301 A 1 
HETATM 19 C C2 NOV . . . B 2 16.583 16.629 25.855 1 29.48 ? C2 NOV 301 A 1 
HETATM 20 C C5 NOV . . . B 2 15.486 17.669 27.888 1 28.74 ? C5 NOV 301 A 1 
HETATM 21 C C9 NOV . . . B 2 14.485 17.749 28.849 1 28.45 ? C9 NOV 301 A 1 
HETATM 22 C C10 NOV . . . B 2 13.456 16.805 28.816 1 28.42 ? C10 NOV 301 A 1 
HETATM 23 C C11 NOV . . . B 2 13.434 15.836 27.864 1 29.51 ? C11 NOV 301 A 1 
HETATM 24 O O10 NOV . . . B 2 16.526 18.571 27.873 1 29.36 ? O10 NOV 301 A 1 
HETATM 25 C C6 NOV . . . B 2 16.607 19.606 28.758 1 30.45 ? C6 NOV 301 A 1 
HETATM 26 O O11 NOV . . . B 2 17.565 20.328 28.636 1 31.2 ? O11 NOV 301 A 1 
HETATM 27 C C7 NOV . . . B 2 15.626 19.731 29.744 1 30.7 ? C7 NOV 301 A 1 
HETATM 28 C C8 NOV . . . B 2 14.569 18.817 29.807 1 30.17 ? C8 NOV 301 A 1 
HETATM 29 O O9 NOV . . . B 2 13.605 18.941 30.743 1 28.93 ? O9 NOV 301 A 1 
HETATM 30 N N2 NOV . . . B 2 15.683 20.781 30.678 1 33.79 ? N2 NOV 301 A 1 
HETATM 31 C C13 NOV . . . B 2 16.649 21.083 31.578 1 35.31 ? C13 NOV 301 A 1 
HETATM 32 O O2 NOV . . . B 2 16.844 22.23 31.962 1 35.84 ? O2 NOV 301 A 1 
HETATM 33 C C14 NOV . . . B 2 17.452 19.949 32.142 1 31.72 ? C14 NOV 301 A 1 
HETATM 34 C C15 NOV . . . B 2 16.848 18.76 32.537 1 32.21 ? C15 NOV 301 A 1 
HETATM 35 C C16 NOV . . . B 2 17.59 17.727 33.092 1 33.59 ? C16 NOV 301 A 1 
HETATM 36 C C17 NOV . . . B 2 18.962 17.916 33.261 1 32.24 ? C17 NOV 301 A 1 
HETATM 37 O O3 NOV . . . B 2 19.719 16.915 33.782 1 31.83 ? O3 NOV 301 A 1 
HETATM 38 C C18 NOV . . . B 2 19.575 19.096 32.872 1 32.22 ? C18 NOV 301 A 1 
HETATM 39 C C19 NOV . . . B 2 18.817 20.108 32.33 1 32.06 ? C19 NOV 301 A 1 
HETATM 40 C C20 NOV . . . B 2 16.92 16.433 33.502 1 35.42 ? C20 NOV 301 A 1 
HETATM 41 C C21 NOV . . . B 2 17.304 15.257 32.647 1 40.36 ? C21 NOV 301 A 1 
HETATM 42 C C22 NOV . . . B 2 16.506 14.43 31.98 1 39.1 ? C22 NOV 301 A 1 
HETATM 43 C C24 NOV . . . B 2 15.029 14.625 31.857 1 40.08 ? C24 NOV 301 A 1 
HETATM 44 C C25 NOV . . . B 2 17.02 13.198 31.312 1 40.21 ? C25 NOV 301 A 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           451 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           44 
#