data_7PQI
#
_model_server_result.job_id            7NJnfndRyJGalWOOH3MUzA 
_model_server_result.datetime_utc      '2024-12-29 17:43:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7pqi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":302}' 
#
_entry.id    7PQI 
#
_exptl.entry_id    7PQI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7PQI 
_cell.length_a            42.869 
_cell.length_b            42.869 
_cell.length_c            256.192 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7PQI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     7PQI 
_atom_sites.fract_transf_matrix[1][1]    0.023327 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023327 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003903 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NOV A 1 301 301 NOV NOV . 
C 3 EDO A 1 302 302 EDO EDO . 
D 3 EDO A 1 303 303 EDO EDO . 
E 3 EDO A 1 304 304 EDO EDO . 
F 3 EDO A 1 305 305 EDO EDO . 
G 3 EDO A 1 306 306 EDO EDO . 
H 4 HOH A 1 401 70 HOH HOH . 
H 4 HOH A 2 402 37 HOH HOH . 
H 4 HOH A 3 403 63 HOH HOH . 
H 4 HOH A 4 404 17 HOH HOH . 
H 4 HOH A 5 405 58 HOH HOH . 
H 4 HOH A 6 406 9 HOH HOH . 
H 4 HOH A 7 407 29 HOH HOH . 
H 4 HOH A 8 408 68 HOH HOH . 
H 4 HOH A 9 409 30 HOH HOH . 
H 4 HOH A 10 410 10 HOH HOH . 
H 4 HOH A 11 411 28 HOH HOH . 
H 4 HOH A 12 412 65 HOH HOH . 
H 4 HOH A 13 413 48 HOH HOH . 
H 4 HOH A 14 414 11 HOH HOH . 
H 4 HOH A 15 415 62 HOH HOH . 
H 4 HOH A 16 416 32 HOH HOH . 
H 4 HOH A 17 417 20 HOH HOH . 
H 4 HOH A 18 418 56 HOH HOH . 
H 4 HOH A 19 419 16 HOH HOH . 
H 4 HOH A 20 420 26 HOH HOH . 
H 4 HOH A 21 421 12 HOH HOH . 
H 4 HOH A 22 422 13 HOH HOH . 
H 4 HOH A 23 423 4 HOH HOH . 
H 4 HOH A 24 424 47 HOH HOH . 
H 4 HOH A 25 425 23 HOH HOH . 
H 4 HOH A 26 426 33 HOH HOH . 
H 4 HOH A 27 427 18 HOH HOH . 
H 4 HOH A 28 428 57 HOH HOH . 
H 4 HOH A 29 429 15 HOH HOH . 
H 4 HOH A 30 430 19 HOH HOH . 
H 4 HOH A 31 431 69 HOH HOH . 
H 4 HOH A 32 432 66 HOH HOH . 
H 4 HOH A 33 433 35 HOH HOH . 
H 4 HOH A 34 434 38 HOH HOH . 
H 4 HOH A 35 435 43 HOH HOH . 
H 4 HOH A 36 436 27 HOH HOH . 
H 4 HOH A 37 437 5 HOH HOH . 
H 4 HOH A 38 438 25 HOH HOH . 
H 4 HOH A 39 439 53 HOH HOH . 
H 4 HOH A 40 440 61 HOH HOH . 
H 4 HOH A 41 441 21 HOH HOH . 
H 4 HOH A 42 442 46 HOH HOH . 
H 4 HOH A 43 443 39 HOH HOH . 
H 4 HOH A 44 444 8 HOH HOH . 
H 4 HOH A 45 445 2 HOH HOH . 
H 4 HOH A 46 446 51 HOH HOH . 
H 4 HOH A 47 447 41 HOH HOH . 
H 4 HOH A 48 448 34 HOH HOH . 
H 4 HOH A 49 449 22 HOH HOH . 
H 4 HOH A 50 450 3 HOH HOH . 
H 4 HOH A 51 451 54 HOH HOH . 
H 4 HOH A 52 452 6 HOH HOH . 
H 4 HOH A 53 453 64 HOH HOH . 
H 4 HOH A 54 454 24 HOH HOH . 
H 4 HOH A 55 455 67 HOH HOH . 
H 4 HOH A 56 456 14 HOH HOH . 
H 4 HOH A 57 457 31 HOH HOH . 
H 4 HOH A 58 458 40 HOH HOH . 
H 4 HOH A 59 459 50 HOH HOH . 
H 4 HOH A 60 460 1 HOH HOH . 
H 4 HOH A 61 461 60 HOH HOH . 
H 4 HOH A 62 462 7 HOH HOH . 
H 4 HOH A 63 463 44 HOH HOH . 
H 4 HOH A 64 464 59 HOH HOH . 
H 4 HOH A 65 465 45 HOH HOH . 
H 4 HOH A 66 466 55 HOH HOH . 
H 4 HOH A 67 467 49 HOH HOH . 
H 4 HOH A 68 468 42 HOH HOH . 
H 4 HOH A 69 469 36 HOH HOH . 
H 4 HOH A 70 470 52 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . C 3 20.872 15 12.594 1 44.85 ? C1 EDO 302 A 1 
HETATM 2 O O1 EDO . . . C 3 22.165 15.528 12.417 1 44.52 ? O1 EDO 302 A 1 
HETATM 3 C C2 EDO . . . C 3 19.821 16.029 12.56 1 44.63 ? C2 EDO 302 A 1 
HETATM 4 O O2 EDO . . . C 3 20.16 17.136 11.764 1 43.7 ? O2 EDO 302 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#