data_7PTB # _model_server_result.job_id XfXyPWGH9PdbJeQE7a3G6A _model_server_result.datetime_utc '2024-11-14 14:47:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ptb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2102}' # _entry.id 7PTB # _exptl.entry_id 7PTB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7PTB _cell.length_a 104.588 _cell.length_b 104.588 _cell.length_c 90.214 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PTB _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C CYS 111 A CYS 1851 1_555 A N MSE 112 A MSE 1852 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale2 A C MSE 112 A MSE 1852 1_555 A N LEU 113 A LEU 1853 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale3 A C TYR 156 A TYR 1896 1_555 A N MSE 157 A MSE 1897 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale4 A C MSE 157 A MSE 1897 1_555 A N VAL 158 A VAL 1898 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale5 A C GLU 265 A GLU 2005 1_555 A N MSE 266 A MSE 2006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale6 A C MSE 266 A MSE 2006 1_555 A N ILE 267 A ILE 2007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale7 A C SER 311 A SER 2051 1_555 A N MSE 312 A MSE 2052 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale8 A C MSE 312 A MSE 2052 1_555 A N CYS 313 A CYS 2053 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7PTB _atom_sites.fract_transf_matrix[1][1] 0.009561 _atom_sites.fract_transf_matrix[1][2] 0.00552 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01104 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011085 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NO3 A 1 2101 2097 NO3 NO3 . C 2 NO3 A 1 2102 2197 NO3 NO3 . D 2 NO3 A 1 2103 2297 NO3 NO3 . E 3 HOH A 1 2201 32 HOH HOH . E 3 HOH A 2 2202 60 HOH HOH . E 3 HOH A 3 2203 88 HOH HOH . E 3 HOH A 4 2204 162 HOH HOH . E 3 HOH A 5 2205 109 HOH HOH . E 3 HOH A 6 2206 132 HOH HOH . E 3 HOH A 7 2207 16 HOH HOH . E 3 HOH A 8 2208 56 HOH HOH . E 3 HOH A 9 2209 10 HOH HOH . E 3 HOH A 10 2210 6 HOH HOH . E 3 HOH A 11 2211 161 HOH HOH . E 3 HOH A 12 2212 96 HOH HOH . E 3 HOH A 13 2213 33 HOH HOH . E 3 HOH A 14 2214 120 HOH HOH . E 3 HOH A 15 2215 7 HOH HOH . E 3 HOH A 16 2216 19 HOH HOH . E 3 HOH A 17 2217 26 HOH HOH . E 3 HOH A 18 2218 127 HOH HOH . E 3 HOH A 19 2219 65 HOH HOH . E 3 HOH A 20 2220 51 HOH HOH . E 3 HOH A 21 2221 31 HOH HOH . E 3 HOH A 22 2222 151 HOH HOH . E 3 HOH A 23 2223 76 HOH HOH . E 3 HOH A 24 2224 70 HOH HOH . E 3 HOH A 25 2225 87 HOH HOH . E 3 HOH A 26 2226 143 HOH HOH . E 3 HOH A 27 2227 67 HOH HOH . E 3 HOH A 28 2228 147 HOH HOH . E 3 HOH A 29 2229 45 HOH HOH . E 3 HOH A 30 2230 38 HOH HOH . E 3 HOH A 31 2231 66 HOH HOH . E 3 HOH A 32 2232 116 HOH HOH . E 3 HOH A 33 2233 23 HOH HOH . E 3 HOH A 34 2234 2 HOH HOH . E 3 HOH A 35 2235 145 HOH HOH . E 3 HOH A 36 2236 69 HOH HOH . E 3 HOH A 37 2237 49 HOH HOH . E 3 HOH A 38 2238 134 HOH HOH . E 3 HOH A 39 2239 5 HOH HOH . E 3 HOH A 40 2240 139 HOH HOH . E 3 HOH A 41 2241 27 HOH HOH . E 3 HOH A 42 2242 25 HOH HOH . E 3 HOH A 43 2243 52 HOH HOH . E 3 HOH A 44 2244 57 HOH HOH . E 3 HOH A 45 2245 101 HOH HOH . E 3 HOH A 46 2246 152 HOH HOH . E 3 HOH A 47 2247 131 HOH HOH . E 3 HOH A 48 2248 29 HOH HOH . E 3 HOH A 49 2249 150 HOH HOH . E 3 HOH A 50 2250 36 HOH HOH . E 3 HOH A 51 2251 125 HOH HOH . E 3 HOH A 52 2252 40 HOH HOH . E 3 HOH A 53 2253 18 HOH HOH . E 3 HOH A 54 2254 71 HOH HOH . E 3 HOH A 55 2255 102 HOH HOH . E 3 HOH A 56 2256 124 HOH HOH . E 3 HOH A 57 2257 128 HOH HOH . E 3 HOH A 58 2258 148 HOH HOH . E 3 HOH A 59 2259 35 HOH HOH . E 3 HOH A 60 2260 133 HOH HOH . E 3 HOH A 61 2261 106 HOH HOH . E 3 HOH A 62 2262 3 HOH HOH . E 3 HOH A 63 2263 146 HOH HOH . E 3 HOH A 64 2264 113 HOH HOH . E 3 HOH A 65 2265 50 HOH HOH . E 3 HOH A 66 2266 149 HOH HOH . E 3 HOH A 67 2267 115 HOH HOH . E 3 HOH A 68 2268 136 HOH HOH . E 3 HOH A 69 2269 64 HOH HOH . E 3 HOH A 70 2270 61 HOH HOH . E 3 HOH A 71 2271 144 HOH HOH . E 3 HOH A 72 2272 140 HOH HOH . E 3 HOH A 73 2273 103 HOH HOH . E 3 HOH A 74 2274 80 HOH HOH . E 3 HOH A 75 2275 62 HOH HOH . E 3 HOH A 76 2276 11 HOH HOH . E 3 HOH A 77 2277 20 HOH HOH . E 3 HOH A 78 2278 142 HOH HOH . E 3 HOH A 79 2279 4 HOH HOH . E 3 HOH A 80 2280 21 HOH HOH . E 3 HOH A 81 2281 121 HOH HOH . E 3 HOH A 82 2282 74 HOH HOH . E 3 HOH A 83 2283 107 HOH HOH . E 3 HOH A 84 2284 160 HOH HOH . E 3 HOH A 85 2285 30 HOH HOH . E 3 HOH A 86 2286 39 HOH HOH . E 3 HOH A 87 2287 79 HOH HOH . E 3 HOH A 88 2288 44 HOH HOH . E 3 HOH A 89 2289 137 HOH HOH . E 3 HOH A 90 2290 112 HOH HOH . E 3 HOH A 91 2291 75 HOH HOH . E 3 HOH A 92 2292 17 HOH HOH . E 3 HOH A 93 2293 24 HOH HOH . E 3 HOH A 94 2294 12 HOH HOH . E 3 HOH A 95 2295 43 HOH HOH . E 3 HOH A 96 2296 123 HOH HOH . E 3 HOH A 97 2297 82 HOH HOH . E 3 HOH A 98 2298 68 HOH HOH . E 3 HOH A 99 2299 41 HOH HOH . E 3 HOH A 100 2300 28 HOH HOH . E 3 HOH A 101 2301 47 HOH HOH . E 3 HOH A 102 2302 22 HOH HOH . E 3 HOH A 103 2303 42 HOH HOH . E 3 HOH A 104 2304 54 HOH HOH . E 3 HOH A 105 2305 55 HOH HOH . E 3 HOH A 106 2306 34 HOH HOH . E 3 HOH A 107 2307 37 HOH HOH . E 3 HOH A 108 2308 73 HOH HOH . E 3 HOH A 109 2309 138 HOH HOH . E 3 HOH A 110 2310 1 HOH HOH . E 3 HOH A 111 2311 13 HOH HOH . E 3 HOH A 112 2312 119 HOH HOH . E 3 HOH A 113 2313 72 HOH HOH . E 3 HOH A 114 2314 8 HOH HOH . E 3 HOH A 115 2315 105 HOH HOH . E 3 HOH A 116 2316 9 HOH HOH . E 3 HOH A 117 2317 53 HOH HOH . E 3 HOH A 118 2318 63 HOH HOH . E 3 HOH A 119 2319 122 HOH HOH . E 3 HOH A 120 2320 15 HOH HOH . E 3 HOH A 121 2321 83 HOH HOH . E 3 HOH A 122 2322 100 HOH HOH . E 3 HOH A 123 2323 78 HOH HOH . E 3 HOH A 124 2324 129 HOH HOH . E 3 HOH A 125 2325 110 HOH HOH . E 3 HOH A 126 2326 59 HOH HOH . E 3 HOH A 127 2327 14 HOH HOH . E 3 HOH A 128 2328 94 HOH HOH . E 3 HOH A 129 2329 141 HOH HOH . E 3 HOH A 130 2330 77 HOH HOH . E 3 HOH A 131 2331 91 HOH HOH . E 3 HOH A 132 2332 81 HOH HOH . E 3 HOH A 133 2333 135 HOH HOH . E 3 HOH A 134 2334 58 HOH HOH . E 3 HOH A 135 2335 126 HOH HOH . E 3 HOH A 136 2336 118 HOH HOH . E 3 HOH A 137 2337 159 HOH HOH . E 3 HOH A 138 2338 84 HOH HOH . E 3 HOH A 139 2339 130 HOH HOH . E 3 HOH A 140 2340 158 HOH HOH . E 3 HOH A 141 2341 48 HOH HOH . E 3 HOH A 142 2342 95 HOH HOH . E 3 HOH A 143 2343 46 HOH HOH . E 3 HOH A 144 2344 89 HOH HOH . E 3 HOH A 145 2345 92 HOH HOH . E 3 HOH A 146 2346 153 HOH HOH . E 3 HOH A 147 2347 97 HOH HOH . E 3 HOH A 148 2348 155 HOH HOH . E 3 HOH A 149 2349 90 HOH HOH . E 3 HOH A 150 2350 85 HOH HOH . E 3 HOH A 151 2351 157 HOH HOH . E 3 HOH A 152 2352 86 HOH HOH . E 3 HOH A 153 2353 111 HOH HOH . E 3 HOH A 154 2354 154 HOH HOH . E 3 HOH A 155 2355 98 HOH HOH . E 3 HOH A 156 2356 117 HOH HOH . E 3 HOH A 157 2357 156 HOH HOH . E 3 HOH A 158 2358 99 HOH HOH . E 3 HOH A 159 2359 93 HOH HOH . E 3 HOH A 160 2360 114 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . C 2 -25.537 45.027 30.205 1 68.4 ? N NO3 2102 A 1 HETATM 2 O O1 NO3 . . . C 2 -25.842 45.186 29.028 1 68.67 ? O1 NO3 2102 A 1 HETATM 3 O O2 NO3 . . . C 2 -26.094 45.685 31.077 1 68.04 ? O2 NO3 2102 A 1 HETATM 4 O O3 NO3 . . . C 2 -24.675 44.21 30.51 1 67.93 ? O3 NO3 2102 A 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #