data_7PU6
#
_model_server_result.job_id            kRpkr3e74qAe3HgSKHDUeg 
_model_server_result.datetime_utc      '2025-01-18 19:11:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7pu6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":501}' 
#
_entry.id    7PU6 
#
_exptl.entry_id    7PU6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7PU6 
_cell.length_a            149.541 
_cell.length_b            149.541 
_cell.length_c            321.718 
_cell.Z_PDB               64 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7PU6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    octameric 
_pdbx_struct_assembly.oligomeric_count      8 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             J 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A OG SER 95 A SER 76 1_555 I P01 P8K . A P8K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.642 ? 
covale ? covale2 B OG SER 95 B SER 76 1_555 K P01 P8K . B P8K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.648 ? 
covale ? covale3 C OG SER 95 C SER 76 1_555 L P01 P8K . C P8K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.642 ? 
covale ? covale4 D OG SER 95 D SER 76 1_555 M P01 P8K . D P8K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.645 ? 
covale ? covale5 E OG SER 95 E SER 76 1_555 N P01 P8K . E P8K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.643 ? 
covale ? covale6 F OG SER 95 F SER 76 1_555 O P01 P8K . F P8K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.638 ? 
covale ? covale7 G OG SER 95 G SER 76 1_555 P P01 P8K . G P8K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.649 ? 
covale ? covale8 H OG SER 95 H SER 76 1_555 Q P01 P8K . H P8K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.645 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     7PU6 
_atom_sites.fract_transf_matrix[1][1]    0.006687 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006687 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003108 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 2 P8K A 1 501 76 P8K 174 . 
J 3 GOL B 1 501 501 GOL GOL . 
K 2 P8K B 1 502 76 P8K 174 . 
L 2 P8K C 1 501 76 P8K 174 . 
M 2 P8K D 1 501 76 P8K 174 . 
N 2 P8K E 1 501 76 P8K 174 . 
O 2 P8K F 1 501 76 P8K 174 . 
P 2 P8K G 1 501 76 P8K 174 . 
Q 2 P8K H 1 501 76 P8K 174 . 
R 4 HOH A 1 601 9 HOH HOH . 
R 4 HOH A 2 602 7 HOH HOH . 
R 4 HOH A 3 603 8 HOH HOH . 
R 4 HOH A 4 604 1 HOH HOH . 
R 4 HOH A 5 605 3 HOH HOH . 
R 4 HOH A 6 606 4 HOH HOH . 
R 4 HOH A 7 607 83 HOH HOH . 
S 4 HOH B 1 601 19 HOH HOH . 
S 4 HOH B 2 602 16 HOH HOH . 
S 4 HOH B 3 603 13 HOH HOH . 
S 4 HOH B 4 604 17 HOH HOH . 
S 4 HOH B 5 605 10 HOH HOH . 
S 4 HOH B 6 606 78 HOH HOH . 
S 4 HOH B 7 607 20 HOH HOH . 
S 4 HOH B 8 608 6 HOH HOH . 
S 4 HOH B 9 609 18 HOH HOH . 
S 4 HOH B 10 610 15 HOH HOH . 
S 4 HOH B 11 611 5 HOH HOH . 
S 4 HOH B 12 612 12 HOH HOH . 
S 4 HOH B 13 613 14 HOH HOH . 
S 4 HOH B 14 614 11 HOH HOH . 
T 4 HOH C 1 601 32 HOH HOH . 
T 4 HOH C 2 602 29 HOH HOH . 
T 4 HOH C 3 603 31 HOH HOH . 
T 4 HOH C 4 604 30 HOH HOH . 
T 4 HOH C 5 605 21 HOH HOH . 
T 4 HOH C 6 606 26 HOH HOH . 
T 4 HOH C 7 607 33 HOH HOH . 
T 4 HOH C 8 608 27 HOH HOH . 
T 4 HOH C 9 609 24 HOH HOH . 
T 4 HOH C 10 610 25 HOH HOH . 
T 4 HOH C 11 611 23 HOH HOH . 
T 4 HOH C 12 612 22 HOH HOH . 
U 4 HOH D 1 601 37 HOH HOH . 
U 4 HOH D 2 602 44 HOH HOH . 
U 4 HOH D 3 603 45 HOH HOH . 
U 4 HOH D 4 604 41 HOH HOH . 
U 4 HOH D 5 605 38 HOH HOH . 
U 4 HOH D 6 606 71 HOH HOH . 
U 4 HOH D 7 607 47 HOH HOH . 
U 4 HOH D 8 608 46 HOH HOH . 
U 4 HOH D 9 609 35 HOH HOH . 
U 4 HOH D 10 610 40 HOH HOH . 
U 4 HOH D 11 611 82 HOH HOH . 
U 4 HOH D 12 612 36 HOH HOH . 
U 4 HOH D 13 613 34 HOH HOH . 
U 4 HOH D 14 614 39 HOH HOH . 
V 4 HOH E 1 601 53 HOH HOH . 
V 4 HOH E 2 602 68 HOH HOH . 
V 4 HOH E 3 603 54 HOH HOH . 
V 4 HOH E 4 604 57 HOH HOH . 
V 4 HOH E 5 605 49 HOH HOH . 
V 4 HOH E 6 606 50 HOH HOH . 
V 4 HOH E 7 607 51 HOH HOH . 
V 4 HOH E 8 608 56 HOH HOH . 
V 4 HOH E 9 609 55 HOH HOH . 
V 4 HOH E 10 610 48 HOH HOH . 
V 4 HOH E 11 611 58 HOH HOH . 
W 4 HOH F 1 601 2 HOH HOH . 
W 4 HOH F 2 602 63 HOH HOH . 
W 4 HOH F 3 603 66 HOH HOH . 
W 4 HOH F 4 604 60 HOH HOH . 
W 4 HOH F 5 605 64 HOH HOH . 
W 4 HOH F 6 606 52 HOH HOH . 
W 4 HOH F 7 607 59 HOH HOH . 
W 4 HOH F 8 608 42 HOH HOH . 
W 4 HOH F 9 609 65 HOH HOH . 
W 4 HOH F 10 610 43 HOH HOH . 
W 4 HOH F 11 611 67 HOH HOH . 
X 4 HOH G 1 601 80 HOH HOH . 
X 4 HOH G 2 602 69 HOH HOH . 
X 4 HOH G 3 603 72 HOH HOH . 
X 4 HOH G 4 604 70 HOH HOH . 
Y 4 HOH H 1 601 77 HOH HOH . 
Y 4 HOH H 2 602 28 HOH HOH . 
Y 4 HOH H 3 603 62 HOH HOH . 
Y 4 HOH H 4 604 79 HOH HOH . 
Y 4 HOH H 5 605 81 HOH HOH . 
Y 4 HOH H 6 606 61 HOH HOH . 
Y 4 HOH H 7 607 73 HOH HOH . 
Y 4 HOH H 8 608 76 HOH HOH . 
Y 4 HOH H 9 609 74 HOH HOH . 
Y 4 HOH H 10 610 75 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . J 3 13.882 -1.663 -38.396 1 71.94 ? C1 GOL 501 B 1 
HETATM 2 O O1 GOL . . . J 3 13.003 -2.457 -37.6 1 77.33 ? O1 GOL 501 B 1 
HETATM 3 C C2 GOL . . . J 3 14.462 -0.475 -37.631 1 73.33 ? C2 GOL 501 B 1 
HETATM 4 O O2 GOL . . . J 3 15.213 0.342 -38.529 1 66.83 ? O2 GOL 501 B 1 
HETATM 5 C C3 GOL . . . J 3 13.453 0.422 -36.929 1 70.44 ? C3 GOL 501 B 1 
HETATM 6 O O3 GOL . . . J 3 14.004 1.712 -36.621 1 67.03 ? O3 GOL 501 B 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           22 
_model_server_stats.create_model_time_ms    44 
_model_server_stats.query_time_ms           496 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           6 
#