data_7PU7 # _model_server_result.job_id 1SIx32Q1dB4BGE276CuSqA _model_server_result.datetime_utc '2024-12-26 11:31:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7pu7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1204}' # _entry.id 7PU7 # _exptl.entry_id 7PU7 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 515.595 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(1~{S},3~{R},4~{R},5~{R},6~{R},7~{S},8~{R},11~{S},13~{S},16~{S},17~{R},18~{E})-13-methoxy-5,17,19-trimethyl-6-oxidanyl-16-[(1~{R})-1-oxidanylethyl]-14-oxidanylidene-2,15-dioxatetracyclo[9.8.0.0^{1,7}.0^{3,8}]nonadeca-9,18-dien-4-yl] 1~{H}-pyrrole-2-carboxylate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7PU7 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 14 A HIS 14 1_555 E ZN ZN . A ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? metalc ? metalc2 A NE2 HIS 16 A HIS 16 1_555 E ZN ZN . A ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc3 A OD2 ASP 23 A ASP 23 1_555 F ZN ZN . A ZN 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc4 A NE2 HIS 48 A HIS 48 1_555 F ZN ZN . A ZN 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? metalc ? metalc5 A OE1 GLU 73 A GLU 73 1_555 D ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.686 ? metalc ? metalc6 A ND1 HIS 107 A HIS 107 1_555 D ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? metalc ? metalc7 A SG CYS 158 A CYS 158 1_555 D ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc8 A NE2 HIS 228 A HIS 228 1_555 F ZN ZN . A ZN 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? hydrog WATSON-CRICK hydrog1 B N1 DA 6 T DA 9 1_555 C N3 DT 14 P DT 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 B N6 DA 6 T DA 9 1_555 C O4 DT 14 P DT 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 B N1 DA 7 T DA 10 1_555 C N3 DT 13 P DT 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 B N6 DA 7 T DA 10 1_555 C O4 DT 13 P DT 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 B N1 DG 8 T DG 11 1_555 C N3 DC 12 P DC 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 B N2 DG 8 T DG 11 1_555 C O2 DC 12 P DC 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 B O6 DG 8 T DG 11 1_555 C N4 DC 12 P DC 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 B N1 DG 9 T DG 12 1_555 C N3 DC 11 P DC 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 B N2 DG 9 T DG 12 1_555 C O2 DC 11 P DC 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 B O6 DG 9 T DG 12 1_555 C N4 DC 11 P DC 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 B N1 DA 10 T DA 13 1_555 C N3 DT 10 P DT 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 B N6 DA 10 T DA 13 1_555 C O4 DT 10 P DT 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 B N3 DC 11 T DC 14 1_555 C N1 DG 9 P DG 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 B N4 DC 11 T DC 14 1_555 C O6 DG 9 P DG 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 B O2 DC 11 T DC 14 1_555 C N2 DG 9 P DG 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 B N1 DG 12 T DG 15 1_555 C N3 DC 8 P DC 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 B N2 DG 12 T DG 15 1_555 C O2 DC 8 P DC 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 B O6 DG 12 T DG 15 1_555 C N4 DC 8 P DC 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 B N1 DA 13 T DA 16 1_555 C N3 DT 7 P DT 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 B N6 DA 13 T DA 16 1_555 C O4 DT 7 P DT 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 B N1 DA 14 T DA 17 1_555 C N3 DT 6 P DT 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 B N6 DA 14 T DA 17 1_555 C O4 DT 6 P DT 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 B N1 DG 15 T DG 18 1_555 C N3 DC 5 P DC 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 B N2 DG 15 T DG 18 1_555 C O2 DC 5 P DC 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 B O6 DG 15 T DG 18 1_555 C N4 DC 5 P DC 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 B N1 DG 16 T DG 19 1_555 C N3 DC 4 P DC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 B N2 DG 16 T DG 19 1_555 C O2 DC 4 P DC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 B O6 DG 16 T DG 19 1_555 C N4 DC 4 P DC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 B N1 DA 17 T DA 20 1_555 C N3 DT 3 P DT 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog30 B N6 DA 17 T DA 20 1_555 C O4 DT 3 P DT 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog31 B N3 DC 18 T DC 21 1_555 C N1 DG 2 P DG 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog32 B N4 DC 18 T DC 21 1_555 C O6 DG 2 P DG 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog33 B O2 DC 18 T DC 21 1_555 C N2 DG 2 P DG 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog34 B N3 DT 19 T DT 22 1_555 C N1 DA 1 P DA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog35 B O4 DT 19 T DT 22 1_555 C N6 DA 1 P DA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C28 H37 N O8' _chem_comp.formula_weight 515.595 _chem_comp.id 82W _chem_comp.mon_nstd_flag . _chem_comp.name '[(1~{S},3~{R},4~{R},5~{R},6~{R},7~{S},8~{R},11~{S},13~{S},16~{S},17~{R},18~{E})-13-methoxy-5,17,19-trimethyl-6-oxidanyl-16-[(1~{R})-1-oxidanylethyl]-14-oxidanylidene-2,15-dioxatetracyclo[9.8.0.0^{1,7}.0^{3,8}]nonadeca-9,18-dien-4-yl] 1~{H}-pyrrole-2-carboxylate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C23 C16 82W sing 1 n n O1 C1 82W doub 2 n n O1' C1' 82W doub 3 n n C18 O7 82W sing 4 n n C18 C19 82W sing 5 n n C18 C17 82W sing 6 n n C16 C15 82W sing 7 n n C16 C17 82W sing 8 n n C1 C2 82W sing 9 n n C1 O6 82W sing 10 n n O2 C20 82W sing 11 n n O2 C2 82W sing 12 n n C15 C14 82W doub 13 e n O3 C8 82W sing 14 n n O3 C13 82W sing 15 n n C1' C2' 82W sing 16 n n C1' O4 82W sing 17 n n C17 O6 82W sing 18 n n C9 C8 82W sing 19 n n C9 C10 82W sing 20 n n C9 O4 82W sing 21 n n C3' C2' 82W doub 22 n y C3' C4' 82W sing 23 n y C8 C7 82W sing 24 n n C3 C2 82W sing 25 n n C3 C4 82W sing 26 n n C2' N1' 82W sing 27 n y C10 C21 82W sing 28 n n C10 C11 82W sing 29 n n C4' C5' 82W doub 30 n y C14 C13 82W sing 31 n n C14 C22 82W sing 32 n n C13 C4 82W sing 33 n n C13 C12 82W sing 34 n n C4 C5 82W sing 35 n n C5 C6 82W doub 36 n n N1' C5' 82W sing 37 n y C7 C6 82W sing 38 n n C7 C12 82W sing 39 n n C11 C12 82W sing 40 n n C11 O5 82W sing 41 n n C21 H1 82W sing 42 n n C21 H2 82W sing 43 n n C21 H3 82W sing 44 n n C10 H4 82W sing 45 n n C11 H5 82W sing 46 n n O5 H6 82W sing 47 n n C12 H7 82W sing 48 n n C7 H8 82W sing 49 n n C6 H9 82W sing 50 n n C5 H10 82W sing 51 n n C4 H11 82W sing 52 n n C3 H12 82W sing 53 n n C3 H13 82W sing 54 n n C2 H14 82W sing 55 n n C20 H15 82W sing 56 n n C20 H16 82W sing 57 n n C20 H17 82W sing 58 n n C17 H18 82W sing 59 n n C18 H19 82W sing 60 n n C19 H20 82W sing 61 n n C19 H21 82W sing 62 n n C19 H22 82W sing 63 n n O7 H23 82W sing 64 n n C16 H24 82W sing 65 n n C23 H25 82W sing 66 n n C23 H26 82W sing 67 n n C23 H27 82W sing 68 n n C15 H28 82W sing 69 n n C22 H29 82W sing 70 n n C22 H30 82W sing 71 n n C22 H31 82W sing 72 n n C8 H32 82W sing 73 n n C9 H33 82W sing 74 n n C3' H34 82W sing 75 n n C4' H35 82W sing 76 n n C5' H36 82W sing 77 n n N1' H37 82W sing 78 n n # _atom_sites.entry_id 7PU7 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN A 1 1201 1 ZN ZN . E 4 ZN A 1 1202 2 ZN ZN . F 4 ZN A 1 1203 3 ZN ZN . G 5 82W A 1 1204 10 82W NRG . H 6 HOH A 1 1301 2 HOH HOH . H 6 HOH A 2 1302 1 HOH HOH . H 6 HOH A 3 1303 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 82W . . . G 5 118.585 112.831 97.609 0 40 ? O2 82W 1204 A 1 HETATM 2 O O3 82W . . . G 5 116.629 108.008 97.717 0 40 ? O3 82W 1204 A 1 HETATM 3 C C21 82W . . . G 5 116.567 104.027 98.562 0 40 ? C21 82W 1204 A 1 HETATM 4 C C10 82W . . . G 5 116.556 105.542 98.511 0 40 ? C10 82W 1204 A 1 HETATM 5 C C11 82W . . . G 5 116.617 106.024 99.905 0 40 ? C11 82W 1204 A 1 HETATM 6 O O5 82W . . . G 5 117.827 105.561 100.459 0 40 ? O5 82W 1204 A 1 HETATM 7 C C12 82W . . . G 5 116.496 107.563 99.974 0 40 ? C12 82W 1204 A 1 HETATM 8 C C7 82W . . . G 5 115.127 107.865 99.5 0 40 ? C7 82W 1204 A 1 HETATM 9 C C6 82W . . . G 5 114.822 109.195 99.588 0 40 ? C6 82W 1204 A 1 HETATM 10 C C5 82W . . . G 5 115.769 110.177 99.443 0 40 ? C5 82W 1204 A 1 HETATM 11 C C4 82W . . . G 5 117.078 109.887 99.24 0 40 ? C4 82W 1204 A 1 HETATM 12 C C3 82W . . . G 5 117.463 110.848 98.131 0 40 ? C3 82W 1204 A 1 HETATM 13 C C2 82W . . . G 5 118.772 111.609 98.279 0 40 ? C2 82W 1204 A 1 HETATM 14 C C20 82W . . . G 5 119.77 113.618 97.698 0 40 ? C20 82W 1204 A 1 HETATM 15 C C1 82W . . . G 5 119.782 110.955 97.602 0 40 ? C1 82W 1204 A 1 HETATM 16 O O1 82W . . . G 5 119.791 110.93 96.374 0 40 ? O1 82W 1204 A 1 HETATM 17 O O6 82W . . . G 5 120.656 110.269 98.384 0 40 ? O6 82W 1204 A 1 HETATM 18 C C17 82W . . . G 5 121.454 109.122 97.858 0 40 ? C17 82W 1204 A 1 HETATM 19 C C18 82W . . . G 5 122.556 109.471 96.845 0 40 ? C18 82W 1204 A 1 HETATM 20 C C19 82W . . . G 5 123.276 110.755 97.229 0 40 ? C19 82W 1204 A 1 HETATM 21 O O7 82W . . . G 5 123.517 108.422 96.847 0 40 ? O7 82W 1204 A 1 HETATM 22 C C16 82W . . . G 5 120.581 107.924 97.368 0 40 ? C16 82W 1204 A 1 HETATM 23 C C23 82W . . . G 5 120.643 107.799 95.855 0 40 ? C23 82W 1204 A 1 HETATM 24 C C15 82W . . . G 5 119.235 108.061 97.687 0 40 ? C15 82W 1204 A 1 HETATM 25 C C14 82W . . . G 5 118.618 108.158 98.926 0 40 ? C14 82W 1204 A 1 HETATM 26 C C22 82W . . . G 5 119.383 108.079 100.241 0 40 ? C22 82W 1204 A 1 HETATM 27 C C13 82W . . . G 5 117.263 108.385 98.937 0 40 ? C13 82W 1204 A 1 HETATM 28 C C8 82W . . . G 5 115.295 107.515 98.056 0 40 ? C8 82W 1204 A 1 HETATM 29 C C9 82W . . . G 5 115.302 106.024 97.898 0 40 ? C9 82W 1204 A 1 HETATM 30 O O4 82W . . . G 5 114.234 105.466 98.615 0 40 ? O4 82W 1204 A 1 HETATM 31 C C1' 82W . . . G 5 113.136 105.359 97.857 0 40 ? C1' 82W 1204 A 1 HETATM 32 O O1' 82W . . . G 5 113.022 105.841 96.75 0 40 ? O1' 82W 1204 A 1 HETATM 33 C C2' 82W . . . G 5 112.14 104.691 98.393 0 40 ? C2' 82W 1204 A 1 HETATM 34 C C3' 82W . . . G 5 110.908 104.702 97.932 0 40 ? C3' 82W 1204 A 1 HETATM 35 C C4' 82W . . . G 5 110.19 103.92 98.724 0 40 ? C4' 82W 1204 A 1 HETATM 36 C C5' 82W . . . G 5 110.996 103.44 99.655 0 40 ? C5' 82W 1204 A 1 HETATM 37 N N1' 82W . . . G 5 112.214 103.92 99.455 0 40 ? N1' 82W 1204 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 37 #