data_7PUD
#
_model_server_result.job_id            jTK74tpPr6ktR6c6ykE9GQ 
_model_server_result.datetime_utc      '2024-10-10 06:27:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7pud 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    7PUD 
#
_exptl.entry_id    7PUD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              118.174 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (4S)-2-METHYL-2,4-PENTANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7PUD 
_cell.length_a            37.918 
_cell.length_b            54.497 
_cell.length_c            81.967 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7PUD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    'P 2 2ab (z,x,y)' 
_symmetry.space_group_name_H-M     'P 2 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
_chem_comp.formula           'C6 H14 O2' 
_chem_comp.formula_weight    118.174 
_chem_comp.id                MPD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (4S)-2-METHYL-2,4-PENTANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MPD sing 224 n n 
C1 H11 MPD sing 225 n n 
C1 H12 MPD sing 226 n n 
C1 H13 MPD sing 227 n n 
C2 O2 MPD sing 228 n n 
C2 CM MPD sing 229 n n 
C2 C3 MPD sing 230 n n 
O2 HO2 MPD sing 231 n n 
CM HM1 MPD sing 232 n n 
CM HM2 MPD sing 233 n n 
CM HM3 MPD sing 234 n n 
C3 C4 MPD sing 235 n n 
C3 H31 MPD sing 236 n n 
C3 H32 MPD sing 237 n n 
C4 O4 MPD sing 238 n n 
C4 C5 MPD sing 239 n n 
C4 H4 MPD sing 240 n n 
O4 HO4 MPD sing 241 n n 
C5 H51 MPD sing 242 n n 
C5 H52 MPD sing 243 n n 
C5 H53 MPD sing 244 n n 
#
_atom_sites.entry_id                     7PUD 
_atom_sites.fract_transf_matrix[1][1]    0.026373 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01835 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.0122 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MPD A 1 201 1 MPD MPD . 
C 2 MPD A 1 202 2 MPD MPD . 
D 3 SO4 A 1 203 1 SO4 SO4 . 
E 3 SO4 A 1 204 2 SO4 SO4 . 
F 3 SO4 A 1 205 3 SO4 SO4 . 
G 3 SO4 A 1 206 4 SO4 SO4 . 
H 3 SO4 A 1 207 5 SO4 SO4 . 
I 3 SO4 A 1 208 6 SO4 SO4 . 
J 3 SO4 A 1 209 7 SO4 SO4 . 
K 3 SO4 A 1 210 8 SO4 SO4 . 
L 4 HOH A 1 301 179 HOH HOH . 
L 4 HOH A 2 302 135 HOH HOH . 
L 4 HOH A 3 303 51 HOH HOH . 
L 4 HOH A 4 304 30 HOH HOH . 
L 4 HOH A 5 305 163 HOH HOH . 
L 4 HOH A 6 306 171 HOH HOH . 
L 4 HOH A 7 307 119 HOH HOH . 
L 4 HOH A 8 308 32 HOH HOH . 
L 4 HOH A 9 309 74 HOH HOH . 
L 4 HOH A 10 310 165 HOH HOH . 
L 4 HOH A 11 311 143 HOH HOH . 
L 4 HOH A 12 312 34 HOH HOH . 
L 4 HOH A 13 313 48 HOH HOH . 
L 4 HOH A 14 314 99 HOH HOH . 
L 4 HOH A 15 315 78 HOH HOH . 
L 4 HOH A 16 316 160 HOH HOH . 
L 4 HOH A 17 317 4 HOH HOH . 
L 4 HOH A 18 318 1 HOH HOH . 
L 4 HOH A 19 319 109 HOH HOH . 
L 4 HOH A 20 320 127 HOH HOH . 
L 4 HOH A 21 321 53 HOH HOH . 
L 4 HOH A 22 322 14 HOH HOH . 
L 4 HOH A 23 323 41 HOH HOH . 
L 4 HOH A 24 324 113 HOH HOH . 
L 4 HOH A 25 325 142 HOH HOH . 
L 4 HOH A 26 326 96 HOH HOH . 
L 4 HOH A 27 327 39 HOH HOH . 
L 4 HOH A 28 328 139 HOH HOH . 
L 4 HOH A 29 329 55 HOH HOH . 
L 4 HOH A 30 330 6 HOH HOH . 
L 4 HOH A 31 331 47 HOH HOH . 
L 4 HOH A 32 332 81 HOH HOH . 
L 4 HOH A 33 333 11 HOH HOH . 
L 4 HOH A 34 334 107 HOH HOH . 
L 4 HOH A 35 335 21 HOH HOH . 
L 4 HOH A 36 336 67 HOH HOH . 
L 4 HOH A 37 337 146 HOH HOH . 
L 4 HOH A 38 338 23 HOH HOH . 
L 4 HOH A 39 339 57 HOH HOH . 
L 4 HOH A 40 340 31 HOH HOH . 
L 4 HOH A 41 341 26 HOH HOH . 
L 4 HOH A 42 342 141 HOH HOH . 
L 4 HOH A 43 343 79 HOH HOH . 
L 4 HOH A 44 344 77 HOH HOH . 
L 4 HOH A 45 345 84 HOH HOH . 
L 4 HOH A 46 346 17 HOH HOH . 
L 4 HOH A 47 347 123 HOH HOH . 
L 4 HOH A 48 348 2 HOH HOH . 
L 4 HOH A 49 349 104 HOH HOH . 
L 4 HOH A 50 350 52 HOH HOH . 
L 4 HOH A 51 351 58 HOH HOH . 
L 4 HOH A 52 352 46 HOH HOH . 
L 4 HOH A 53 353 22 HOH HOH . 
L 4 HOH A 54 354 152 HOH HOH . 
L 4 HOH A 55 355 24 HOH HOH . 
L 4 HOH A 56 356 129 HOH HOH . 
L 4 HOH A 57 357 181 HOH HOH . 
L 4 HOH A 58 358 72 HOH HOH . 
L 4 HOH A 59 359 89 HOH HOH . 
L 4 HOH A 60 360 36 HOH HOH . 
L 4 HOH A 61 361 49 HOH HOH . 
L 4 HOH A 62 362 62 HOH HOH . 
L 4 HOH A 63 363 60 HOH HOH . 
L 4 HOH A 64 364 20 HOH HOH . 
L 4 HOH A 65 365 3 HOH HOH . 
L 4 HOH A 66 366 137 HOH HOH . 
L 4 HOH A 67 367 114 HOH HOH . 
L 4 HOH A 68 368 98 HOH HOH . 
L 4 HOH A 69 369 116 HOH HOH . 
L 4 HOH A 70 370 45 HOH HOH . 
L 4 HOH A 71 371 25 HOH HOH . 
L 4 HOH A 72 372 158 HOH HOH . 
L 4 HOH A 73 373 5 HOH HOH . 
L 4 HOH A 74 374 150 HOH HOH . 
L 4 HOH A 75 375 92 HOH HOH . 
L 4 HOH A 76 376 44 HOH HOH . 
L 4 HOH A 77 377 29 HOH HOH . 
L 4 HOH A 78 378 33 HOH HOH . 
L 4 HOH A 79 379 43 HOH HOH . 
L 4 HOH A 80 380 83 HOH HOH . 
L 4 HOH A 81 381 95 HOH HOH . 
L 4 HOH A 82 382 65 HOH HOH . 
L 4 HOH A 83 383 19 HOH HOH . 
L 4 HOH A 84 384 7 HOH HOH . 
L 4 HOH A 85 385 115 HOH HOH . 
L 4 HOH A 86 386 97 HOH HOH . 
L 4 HOH A 87 387 15 HOH HOH . 
L 4 HOH A 88 388 169 HOH HOH . 
L 4 HOH A 89 389 101 HOH HOH . 
L 4 HOH A 90 390 61 HOH HOH . 
L 4 HOH A 91 391 9 HOH HOH . 
L 4 HOH A 92 392 10 HOH HOH . 
L 4 HOH A 93 393 80 HOH HOH . 
L 4 HOH A 94 394 90 HOH HOH . 
L 4 HOH A 95 395 18 HOH HOH . 
L 4 HOH A 96 396 68 HOH HOH . 
L 4 HOH A 97 397 94 HOH HOH . 
L 4 HOH A 98 398 40 HOH HOH . 
L 4 HOH A 99 399 64 HOH HOH . 
L 4 HOH A 100 400 130 HOH HOH . 
L 4 HOH A 101 401 103 HOH HOH . 
L 4 HOH A 102 402 122 HOH HOH . 
L 4 HOH A 103 403 170 HOH HOH . 
L 4 HOH A 104 404 13 HOH HOH . 
L 4 HOH A 105 405 42 HOH HOH . 
L 4 HOH A 106 406 162 HOH HOH . 
L 4 HOH A 107 407 12 HOH HOH . 
L 4 HOH A 108 408 156 HOH HOH . 
L 4 HOH A 109 409 69 HOH HOH . 
L 4 HOH A 110 410 16 HOH HOH . 
L 4 HOH A 111 411 38 HOH HOH . 
L 4 HOH A 112 412 66 HOH HOH . 
L 4 HOH A 113 413 138 HOH HOH . 
L 4 HOH A 114 414 8 HOH HOH . 
L 4 HOH A 115 415 28 HOH HOH . 
L 4 HOH A 116 416 27 HOH HOH . 
L 4 HOH A 117 417 87 HOH HOH . 
L 4 HOH A 118 418 126 HOH HOH . 
L 4 HOH A 119 419 133 HOH HOH . 
L 4 HOH A 120 420 182 HOH HOH . 
L 4 HOH A 121 421 59 HOH HOH . 
L 4 HOH A 122 422 110 HOH HOH . 
L 4 HOH A 123 423 157 HOH HOH . 
L 4 HOH A 124 424 37 HOH HOH . 
L 4 HOH A 125 425 148 HOH HOH . 
L 4 HOH A 126 426 180 HOH HOH . 
L 4 HOH A 127 427 172 HOH HOH . 
L 4 HOH A 128 428 85 HOH HOH . 
L 4 HOH A 129 429 134 HOH HOH . 
L 4 HOH A 130 430 108 HOH HOH . 
L 4 HOH A 131 431 100 HOH HOH . 
L 4 HOH A 132 432 159 HOH HOH . 
L 4 HOH A 133 433 105 HOH HOH . 
L 4 HOH A 134 434 176 HOH HOH . 
L 4 HOH A 135 435 76 HOH HOH . 
L 4 HOH A 136 436 151 HOH HOH . 
L 4 HOH A 137 437 106 HOH HOH . 
L 4 HOH A 138 438 75 HOH HOH . 
L 4 HOH A 139 439 112 HOH HOH . 
L 4 HOH A 140 440 136 HOH HOH . 
L 4 HOH A 141 441 175 HOH HOH . 
L 4 HOH A 142 442 120 HOH HOH . 
L 4 HOH A 143 443 93 HOH HOH . 
L 4 HOH A 144 444 118 HOH HOH . 
L 4 HOH A 145 445 73 HOH HOH . 
L 4 HOH A 146 446 164 HOH HOH . 
L 4 HOH A 147 447 178 HOH HOH . 
L 4 HOH A 148 448 82 HOH HOH . 
L 4 HOH A 149 449 63 HOH HOH . 
L 4 HOH A 150 450 91 HOH HOH . 
L 4 HOH A 151 451 35 HOH HOH . 
L 4 HOH A 152 452 124 HOH HOH . 
L 4 HOH A 153 453 131 HOH HOH . 
L 4 HOH A 154 454 174 HOH HOH . 
L 4 HOH A 155 455 166 HOH HOH . 
L 4 HOH A 156 456 71 HOH HOH . 
L 4 HOH A 157 457 50 HOH HOH . 
L 4 HOH A 158 458 125 HOH HOH . 
L 4 HOH A 159 459 88 HOH HOH . 
L 4 HOH A 160 460 54 HOH HOH . 
L 4 HOH A 161 461 128 HOH HOH . 
L 4 HOH A 162 462 144 HOH HOH . 
L 4 HOH A 163 463 111 HOH HOH . 
L 4 HOH A 164 464 56 HOH HOH . 
L 4 HOH A 165 465 86 HOH HOH . 
L 4 HOH A 166 466 145 HOH HOH . 
L 4 HOH A 167 467 154 HOH HOH . 
L 4 HOH A 168 468 70 HOH HOH . 
L 4 HOH A 169 469 117 HOH HOH . 
L 4 HOH A 170 470 155 HOH HOH . 
L 4 HOH A 171 471 177 HOH HOH . 
L 4 HOH A 172 472 149 HOH HOH . 
L 4 HOH A 173 473 167 HOH HOH . 
L 4 HOH A 174 474 140 HOH HOH . 
L 4 HOH A 175 475 102 HOH HOH . 
L 4 HOH A 176 476 153 HOH HOH . 
L 4 HOH A 177 477 161 HOH HOH . 
L 4 HOH A 178 478 147 HOH HOH . 
L 4 HOH A 179 479 132 HOH HOH . 
L 4 HOH A 180 480 173 HOH HOH . 
L 4 HOH A 181 481 121 HOH HOH . 
L 4 HOH A 182 482 168 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MPD . . . B 2 23.457 57.72 15.748 1 15.21 ? C1 MPD 201 A 1 
HETATM 2 C C2 MPD . . . B 2 23.806 57.886 17.224 1 12.02 ? C2 MPD 201 A 1 
HETATM 3 O O2 MPD . . . B 2 25.159 58.424 17.302 1 21.52 ? O2 MPD 201 A 1 
HETATM 4 C CM MPD . . . B 2 22.886 58.917 17.84 1 8.18 ? CM MPD 201 A 1 
HETATM 5 C C3 MPD . . . B 2 23.637 56.558 17.962 1 11.95 ? C3 MPD 201 A 1 
HETATM 6 C C4 MPD . . . B 2 23.835 56.626 19.476 1 11.63 ? C4 MPD 201 A 1 
HETATM 7 O O4 MPD . . . B 2 23.336 55.46 20.118 1 19.6 ? O4 MPD 201 A 1 
HETATM 8 C C5 MPD . . . B 2 25.314 56.716 19.776 1 8.35 ? C5 MPD 201 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           296 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           8 
#