data_7PV1 # _model_server_result.job_id 5Khyqz9sMnGdhwYptZHd3Q _model_server_result.datetime_utc '2024-12-26 15:58:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7pv1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 7PV1 # _exptl.entry_id 7PV1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.72 _cell.angle_gamma 90 _cell.entry_id 7PV1 _cell.length_a 58.197 _cell.length_b 85.371 _cell.length_c 61.497 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PV1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,H,I 1 1 C,D,G,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 117 A CYS 117 1_555 A SG CYS 128 A CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 B SG CYS 117 B CYS 117 1_555 B SG CYS 128 B CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 C SG CYS 117 C CYS 117 1_555 C SG CYS 128 C CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 D SG CYS 117 D CYS 117 1_555 D SG CYS 128 D CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 237 n n O1 HO1 PG4 sing 238 n n C1 C2 PG4 sing 239 n n C1 H11 PG4 sing 240 n n C1 H12 PG4 sing 241 n n C2 O2 PG4 sing 242 n n C2 H21 PG4 sing 243 n n C2 H22 PG4 sing 244 n n O2 C3 PG4 sing 245 n n C3 C4 PG4 sing 246 n n C3 H31 PG4 sing 247 n n C3 H32 PG4 sing 248 n n C4 O3 PG4 sing 249 n n C4 H41 PG4 sing 250 n n C4 H42 PG4 sing 251 n n O3 C5 PG4 sing 252 n n C5 C6 PG4 sing 253 n n C5 H51 PG4 sing 254 n n C5 H52 PG4 sing 255 n n C6 O4 PG4 sing 256 n n C6 H61 PG4 sing 257 n n C6 H62 PG4 sing 258 n n O4 C7 PG4 sing 259 n n C7 C8 PG4 sing 260 n n C7 H71 PG4 sing 261 n n C7 H72 PG4 sing 262 n n C8 O5 PG4 sing 263 n n C8 H81 PG4 sing 264 n n C8 H82 PG4 sing 265 n n O5 HO5 PG4 sing 266 n n # _atom_sites.entry_id 7PV1 _atom_sites.fract_transf_matrix[1][1] 0.017183 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003565 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011714 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016607 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PG4 A 1 201 2 PG4 PG4 . F 2 PG4 B 1 201 1 PG4 PG4 . G 2 PG4 D 1 201 3 PG4 PG4 . H 3 HOH A 1 301 2 HOH HOH . I 3 HOH B 1 301 6 HOH HOH . I 3 HOH B 2 302 4 HOH HOH . I 3 HOH B 3 303 8 HOH HOH . J 3 HOH C 1 201 7 HOH HOH . J 3 HOH C 2 202 1 HOH HOH . J 3 HOH C 3 203 5 HOH HOH . J 3 HOH C 4 204 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . E 2 30.624 67.969 64.826 1 104.39 ? O1 PG4 201 A 1 HETATM 2 C C1 PG4 . . . E 2 31.183 67.496 66.021 1 104.89 ? C1 PG4 201 A 1 HETATM 3 C C2 PG4 . . . E 2 30.742 66.051 66.245 1 103.36 ? C2 PG4 201 A 1 HETATM 4 O O2 PG4 . . . E 2 31.01 65.3 65.096 1 98.99 ? O2 PG4 201 A 1 HETATM 5 C C3 PG4 . . . E 2 31.362 63.973 65.361 1 95.14 ? C3 PG4 201 A 1 HETATM 6 C C4 PG4 . . . E 2 31.966 63.358 64.102 1 94.04 ? C4 PG4 201 A 1 HETATM 7 O O3 PG4 . . . E 2 32.961 64.207 63.605 1 93.78 ? O3 PG4 201 A 1 HETATM 8 C C5 PG4 . . . E 2 33.221 64.038 62.241 1 93.21 ? C5 PG4 201 A 1 HETATM 9 C C6 PG4 . . . E 2 34.458 64.844 61.849 1 92.61 ? C6 PG4 201 A 1 HETATM 10 O O4 PG4 . . . E 2 35.544 64.432 62.629 1 95.47 ? O4 PG4 201 A 1 HETATM 11 C C7 PG4 . . . E 2 36.788 64.755 62.077 1 98.2 ? C7 PG4 201 A 1 HETATM 12 C C8 PG4 . . . E 2 37.892 64.476 63.095 1 97.73 ? C8 PG4 201 A 1 HETATM 13 O O5 PG4 . . . E 2 37.812 63.143 63.521 1 95.09 ? O5 PG4 201 A 1 HETATM 14 H HO1 PG4 . . . E 2 30.931 68.743 64.656 1 125.29 ? HO1 PG4 201 A 1 HETATM 15 H H11 PG4 . . . E 2 32.151 67.534 65.963 1 125.89 ? H11 PG4 201 A 1 HETATM 16 H H12 PG4 . . . E 2 30.881 68.046 66.76 1 125.89 ? H12 PG4 201 A 1 HETATM 17 H H21 PG4 . . . E 2 31.227 65.677 66.997 1 124.05 ? H21 PG4 201 A 1 HETATM 18 H H22 PG4 . . . E 2 29.79 66.029 66.432 1 124.05 ? H22 PG4 201 A 1 HETATM 19 H H31 PG4 . . . E 2 32.013 63.947 66.08 1 114.19 ? H31 PG4 201 A 1 HETATM 20 H H32 PG4 . . . E 2 30.573 63.473 65.622 1 114.19 ? H32 PG4 201 A 1 HETATM 21 H H41 PG4 . . . E 2 32.353 62.495 64.316 1 112.87 ? H41 PG4 201 A 1 HETATM 22 H H42 PG4 . . . E 2 31.273 63.244 63.432 1 112.87 ? H42 PG4 201 A 1 HETATM 23 H H51 PG4 . . . E 2 33.376 63.099 62.056 1 111.87 ? H51 PG4 201 A 1 HETATM 24 H H52 PG4 . . . E 2 32.459 64.348 61.727 1 111.87 ? H52 PG4 201 A 1 HETATM 25 H H61 PG4 . . . E 2 34.658 64.695 60.912 1 111.16 ? H61 PG4 201 A 1 HETATM 26 H H62 PG4 . . . E 2 34.291 65.787 61.999 1 111.16 ? H62 PG4 201 A 1 HETATM 27 H H71 PG4 . . . E 2 36.938 64.217 61.284 1 117.86 ? H71 PG4 201 A 1 HETATM 28 H H72 PG4 . . . E 2 36.8 65.695 61.838 1 117.86 ? H72 PG4 201 A 1 HETATM 29 H H81 PG4 . . . E 2 38.757 64.632 62.684 1 117.29 ? H81 PG4 201 A 1 HETATM 30 H H82 PG4 . . . E 2 37.785 65.066 63.858 1 117.29 ? H82 PG4 201 A 1 HETATM 31 H HO5 PG4 . . . E 2 38.361 63.016 64.157 1 114.13 ? HO5 PG4 201 A 1 # _model_server_stats.io_time_ms 33 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 31 #