data_7PV1 # _model_server_result.job_id 5d4Jys8FYjYowmlhSri1IQ _model_server_result.datetime_utc '2024-12-26 16:20:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7pv1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":201}' # _entry.id 7PV1 # _exptl.entry_id 7PV1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.72 _cell.angle_gamma 90 _cell.entry_id 7PV1 _cell.length_a 58.197 _cell.length_b 85.371 _cell.length_c 61.497 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PV1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,H,I 1 1 C,D,G,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 117 A CYS 117 1_555 A SG CYS 128 A CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 B SG CYS 117 B CYS 117 1_555 B SG CYS 128 B CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 C SG CYS 117 C CYS 117 1_555 C SG CYS 128 C CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 D SG CYS 117 D CYS 117 1_555 D SG CYS 128 D CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 237 n n O1 HO1 PG4 sing 238 n n C1 C2 PG4 sing 239 n n C1 H11 PG4 sing 240 n n C1 H12 PG4 sing 241 n n C2 O2 PG4 sing 242 n n C2 H21 PG4 sing 243 n n C2 H22 PG4 sing 244 n n O2 C3 PG4 sing 245 n n C3 C4 PG4 sing 246 n n C3 H31 PG4 sing 247 n n C3 H32 PG4 sing 248 n n C4 O3 PG4 sing 249 n n C4 H41 PG4 sing 250 n n C4 H42 PG4 sing 251 n n O3 C5 PG4 sing 252 n n C5 C6 PG4 sing 253 n n C5 H51 PG4 sing 254 n n C5 H52 PG4 sing 255 n n C6 O4 PG4 sing 256 n n C6 H61 PG4 sing 257 n n C6 H62 PG4 sing 258 n n O4 C7 PG4 sing 259 n n C7 C8 PG4 sing 260 n n C7 H71 PG4 sing 261 n n C7 H72 PG4 sing 262 n n C8 O5 PG4 sing 263 n n C8 H81 PG4 sing 264 n n C8 H82 PG4 sing 265 n n O5 HO5 PG4 sing 266 n n # _atom_sites.entry_id 7PV1 _atom_sites.fract_transf_matrix[1][1] 0.017183 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003565 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011714 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016607 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PG4 A 1 201 2 PG4 PG4 . F 2 PG4 B 1 201 1 PG4 PG4 . G 2 PG4 D 1 201 3 PG4 PG4 . H 3 HOH A 1 301 2 HOH HOH . I 3 HOH B 1 301 6 HOH HOH . I 3 HOH B 2 302 4 HOH HOH . I 3 HOH B 3 303 8 HOH HOH . J 3 HOH C 1 201 7 HOH HOH . J 3 HOH C 2 202 1 HOH HOH . J 3 HOH C 3 203 5 HOH HOH . J 3 HOH C 4 204 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . F 2 36.266 72.975 59.296 1 87.68 ? O1 PG4 201 B 1 HETATM 2 C C1 PG4 . . . F 2 35.233 72.197 58.76 1 90.58 ? C1 PG4 201 B 1 HETATM 3 C C2 PG4 . . . F 2 35.864 71.147 57.85 1 92.58 ? C2 PG4 201 B 1 HETATM 4 O O2 PG4 . . . F 2 34.902 70.215 57.463 1 92.86 ? O2 PG4 201 B 1 HETATM 5 C C3 PG4 . . . F 2 34.713 70.18 56.08 1 93.62 ? C3 PG4 201 B 1 HETATM 6 C C4 PG4 . . . F 2 33.249 70.475 55.764 1 94.94 ? C4 PG4 201 B 1 HETATM 7 O O3 PG4 . . . F 2 32.63 71.053 56.875 1 98.73 ? O3 PG4 201 B 1 HETATM 8 C C5 PG4 . . . F 2 31.901 72.203 56.556 1 99.44 ? C5 PG4 201 B 1 HETATM 9 C C6 PG4 . . . F 2 30.43 71.958 56.879 1 99.73 ? C6 PG4 201 B 1 HETATM 10 O O4 PG4 . . . F 2 30.351 71.248 58.08 1 99.02 ? O4 PG4 201 B 1 HETATM 11 C C7 PG4 . . . F 2 29.061 71.211 58.612 1 94.68 ? C7 PG4 201 B 1 HETATM 12 C C8 PG4 . . . F 2 29.13 70.825 60.088 1 91.7 ? C8 PG4 201 B 1 HETATM 13 O O5 PG4 . . . F 2 29.121 71.983 60.877 1 87.9 ? O5 PG4 201 B 1 HETATM 14 H HO1 PG4 . . . F 2 35.939 73.552 59.828 1 105.24 ? HO1 PG4 201 B 1 HETATM 15 H H11 PG4 . . . F 2 34.742 71.763 59.474 1 108.72 ? H11 PG4 201 B 1 HETATM 16 H H12 PG4 . . . F 2 34.629 72.758 58.247 1 108.72 ? H12 PG4 201 B 1 HETATM 17 H H21 PG4 . . . F 2 36.227 71.581 57.062 1 111.12 ? H21 PG4 201 B 1 HETATM 18 H H22 PG4 . . . F 2 36.576 70.695 58.328 1 111.12 ? H22 PG4 201 B 1 HETATM 19 H H31 PG4 . . . F 2 35.277 70.847 55.659 1 112.37 ? H31 PG4 201 B 1 HETATM 20 H H32 PG4 . . . F 2 34.946 69.3 55.744 1 112.37 ? H32 PG4 201 B 1 HETATM 21 H H41 PG4 . . . F 2 33.199 71.088 55.014 1 113.95 ? H41 PG4 201 B 1 HETATM 22 H H42 PG4 . . . F 2 32.795 69.649 55.537 1 113.95 ? H42 PG4 201 B 1 HETATM 23 H H51 PG4 . . . F 2 32.229 72.952 57.077 1 119.35 ? H51 PG4 201 B 1 HETATM 24 H H52 PG4 . . . F 2 32 72.399 55.611 1 119.35 ? H52 PG4 201 B 1 HETATM 25 H H61 PG4 . . . F 2 29.97 72.807 56.969 1 119.7 ? H61 PG4 201 B 1 HETATM 26 H H62 PG4 . . . F 2 30.02 71.442 56.166 1 119.7 ? H62 PG4 201 B 1 HETATM 27 H H71 PG4 . . . F 2 28.65 72.085 58.526 1 113.64 ? H71 PG4 201 B 1 HETATM 28 H H72 PG4 . . . F 2 28.532 70.556 58.131 1 113.64 ? H72 PG4 201 B 1 HETATM 29 H H81 PG4 . . . F 2 28.364 70.274 60.314 1 110.06 ? H81 PG4 201 B 1 HETATM 30 H H82 PG4 . . . F 2 29.946 70.327 60.254 1 110.06 ? H82 PG4 201 B 1 HETATM 31 H HO5 PG4 . . . F 2 29.193 71.769 61.696 1 105.5 ? HO5 PG4 201 B 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 31 #