data_7PW5 # _model_server_result.job_id JzKF2A2OT-J4T080orGrBQ _model_server_result.datetime_utc '2025-07-31 14:35:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7pw5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":3701}' # _entry.id 7PW5 # _exptl.entry_id 7PW5 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 660.035 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'INOSITOL HEXAKISPHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7PW5 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PW5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 1613 A LYS 1617 1_555 D O34 IHP . A IHP 3701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.297 ? metalc ? metalc1 C OG SER 218 C SER 218 1_555 G MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc2 C OG1 THR 253 C THR 253 1_555 G MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc3 F O1G ATP . C ATP 601 1_555 G MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc4 F O3B ATP . C ATP 601 1_555 G MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.596 ? # _chem_comp.formula 'C6 H18 O24 P6' _chem_comp.formula_weight 660.035 _chem_comp.id IHP _chem_comp.mon_nstd_flag . _chem_comp.name 'INOSITOL HEXAKISPHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'MYO-INOSITOL HEXAKISPHOSPHATE;INOSITOL 1,2,3,4,5,6-HEXAKISPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IHP sing 269 n n C1 C6 IHP sing 270 n n C1 O11 IHP sing 271 n n C1 H1 IHP sing 272 n n C2 C3 IHP sing 273 n n C2 O12 IHP sing 274 n n C2 H2 IHP sing 275 n n C3 C4 IHP sing 276 n n C3 O13 IHP sing 277 n n C3 H3 IHP sing 278 n n C4 C5 IHP sing 279 n n C4 O14 IHP sing 280 n n C4 H4 IHP sing 281 n n C5 C6 IHP sing 282 n n C5 O15 IHP sing 283 n n C5 H5 IHP sing 284 n n C6 O16 IHP sing 285 n n C6 H6 IHP sing 286 n n O11 P1 IHP sing 287 n n P1 O21 IHP doub 288 n n P1 O31 IHP sing 289 n n P1 O41 IHP sing 290 n n O31 H31 IHP sing 291 n n O41 H41 IHP sing 292 n n O12 P2 IHP sing 293 n n P2 O22 IHP doub 294 n n P2 O32 IHP sing 295 n n P2 O42 IHP sing 296 n n O32 H32 IHP sing 297 n n O42 H42 IHP sing 298 n n O13 P3 IHP sing 299 n n P3 O23 IHP doub 300 n n P3 O33 IHP sing 301 n n P3 O43 IHP sing 302 n n O33 H33 IHP sing 303 n n O43 H43 IHP sing 304 n n O14 P4 IHP sing 305 n n P4 O24 IHP doub 306 n n P4 O34 IHP sing 307 n n P4 O44 IHP sing 308 n n O34 H34 IHP sing 309 n n O44 H44 IHP sing 310 n n O15 P5 IHP sing 311 n n P5 O25 IHP doub 312 n n P5 O35 IHP sing 313 n n P5 O45 IHP sing 314 n n O35 H35 IHP sing 315 n n O45 H45 IHP sing 316 n n O16 P6 IHP sing 317 n n P6 O26 IHP doub 318 n n P6 O36 IHP sing 319 n n P6 O46 IHP sing 320 n n O36 H36 IHP sing 321 n n O46 H46 IHP sing 322 n n # _atom_sites.entry_id 7PW5 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 IHP A 1 3701 3702 IHP IHP . E 5 88C A 1 3702 3701 88C LIG . F 6 ATP C 1 601 601 ATP ATP . G 7 MG C 1 602 602 MG MG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IHP . . . D 4 152.467 139.459 191.955 1 91.59 ? C1 IHP 3701 A 1 HETATM 2 C C2 IHP . . . D 4 152.912 138.538 190.81 1 91.59 ? C2 IHP 3701 A 1 HETATM 3 C C3 IHP . . . D 4 154.37 138.726 190.36 1 91.59 ? C3 IHP 3701 A 1 HETATM 4 C C4 IHP . . . D 4 155.21 139.664 191.248 1 91.59 ? C4 IHP 3701 A 1 HETATM 5 C C5 IHP . . . D 4 154.513 141.002 191.561 1 91.59 ? C5 IHP 3701 A 1 HETATM 6 C C6 IHP . . . D 4 153.004 140.896 191.847 1 91.59 ? C6 IHP 3701 A 1 HETATM 7 O O11 IHP . . . D 4 151.062 139.515 191.943 1 91.59 ? O11 IHP 3701 A 1 HETATM 8 P P1 IHP . . . D 4 150.256 139.445 193.377 1 91.59 ? P1 IHP 3701 A 1 HETATM 9 O O21 IHP . . . D 4 150.693 138.216 194.137 1 91.59 ? O21 IHP 3701 A 1 HETATM 10 O O31 IHP . . . D 4 150.567 140.679 194.188 1 91.59 -1 O31 IHP 3701 A 1 HETATM 11 O O41 IHP . . . D 4 148.771 139.376 193.116 1 91.59 ? O41 IHP 3701 A 1 HETATM 12 O O12 IHP . . . D 4 152.065 138.758 189.707 1 91.59 ? O12 IHP 3701 A 1 HETATM 13 P P2 IHP . . . D 4 151.276 137.467 189.054 1 91.59 ? P2 IHP 3701 A 1 HETATM 14 O O22 IHP . . . D 4 149.894 137.367 189.651 1 91.59 ? O22 IHP 3701 A 1 HETATM 15 O O32 IHP . . . D 4 151.163 137.648 187.56 1 91.59 -1 O32 IHP 3701 A 1 HETATM 16 O O42 IHP . . . D 4 152.046 136.203 189.353 1 91.59 ? O42 IHP 3701 A 1 HETATM 17 O O13 IHP . . . D 4 154.988 137.463 190.342 1 91.59 ? O13 IHP 3701 A 1 HETATM 18 P P3 IHP . . . D 4 155.761 136.986 188.968 1 91.59 ? P3 IHP 3701 A 1 HETATM 19 O O23 IHP . . . D 4 156.666 135.819 189.282 1 91.59 ? O23 IHP 3701 A 1 HETATM 20 O O33 IHP . . . D 4 154.742 136.568 187.935 1 91.59 -1 O33 IHP 3701 A 1 HETATM 21 O O43 IHP . . . D 4 156.582 138.132 188.429 1 91.59 ? O43 IHP 3701 A 1 HETATM 22 O O14 IHP . . . D 4 155.57 139.006 192.44 1 91.59 ? O14 IHP 3701 A 1 HETATM 23 P P4 IHP . . . D 4 157.164 138.973 192.859 1 91.59 ? P4 IHP 3701 A 1 HETATM 24 O O24 IHP . . . D 4 157.308 138.394 194.246 1 91.59 -1 O24 IHP 3701 A 1 HETATM 25 O O34 IHP . . . D 4 157.93 138.122 191.874 1 91.59 ? O34 IHP 3701 A 1 HETATM 26 O O44 IHP . . . D 4 157.72 140.377 192.842 1 91.59 ? O44 IHP 3701 A 1 HETATM 27 O O15 IHP . . . D 4 155.199 141.652 192.616 1 91.59 ? O15 IHP 3701 A 1 HETATM 28 P P5 IHP . . . D 4 154.706 141.614 194.195 1 91.59 ? P5 IHP 3701 A 1 HETATM 29 O O25 IHP . . . D 4 154.314 140.216 194.612 1 91.59 ? O25 IHP 3701 A 1 HETATM 30 O O35 IHP . . . D 4 155.858 142.061 195.063 1 91.59 -1 O35 IHP 3701 A 1 HETATM 31 O O45 IHP . . . D 4 153.55 142.563 194.415 1 91.59 ? O45 IHP 3701 A 1 HETATM 32 O O16 IHP . . . D 4 152.305 141.575 190.832 1 91.59 ? O16 IHP 3701 A 1 HETATM 33 P P6 IHP . . . D 4 151.98 143.174 191.056 1 91.59 ? P6 IHP 3701 A 1 HETATM 34 O O26 IHP . . . D 4 153.251 143.974 190.901 1 91.59 ? O26 IHP 3701 A 1 HETATM 35 O O36 IHP . . . D 4 150.969 143.635 190.034 1 91.59 -1 O36 IHP 3701 A 1 HETATM 36 O O46 IHP . . . D 4 151.425 143.382 192.445 1 91.59 ? O46 IHP 3701 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 36 #