data_7PW7 # _model_server_result.job_id rILqFpGcjoEZ3BEjXwLyPA _model_server_result.datetime_utc '2025-07-30 22:25:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7pw7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 7PW7 # _exptl.entry_id 7PW7 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 507.181 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7PW7 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PW7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 1613 A LYS 1617 1_555 C O34 IHP . A IHP 3701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.297 ? metalc ? metalc1 E O1G ATP . C ATP 601 1_555 F MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? metalc ? metalc2 E O3G ATP . C ATP 601 1_555 F MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.655 ? metalc ? metalc3 E O2B ATP . C ATP 601 1_555 F MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc4 E O3B ATP . C ATP 601 1_555 F MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? metalc ? metalc5 E O3A ATP . C ATP 601 1_555 F MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.879 ? # _chem_comp.formula 'C10 H16 N5 O13 P3' _chem_comp.formula_weight 507.181 _chem_comp.id ATP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G ATP doub 140 n n PG O2G ATP sing 141 n n PG O3G ATP sing 142 n n PG O3B ATP sing 143 n n O2G HOG2 ATP sing 144 n n O3G HOG3 ATP sing 145 n n PB O1B ATP doub 146 n n PB O2B ATP sing 147 n n PB O3B ATP sing 148 n n PB O3A ATP sing 149 n n O2B HOB2 ATP sing 150 n n PA O1A ATP doub 151 n n PA O2A ATP sing 152 n n PA O3A ATP sing 153 n n PA O5' ATP sing 154 n n O2A HOA2 ATP sing 155 n n O5' C5' ATP sing 156 n n C5' C4' ATP sing 157 n n C5' "H5'1" ATP sing 158 n n C5' "H5'2" ATP sing 159 n n C4' O4' ATP sing 160 n n C4' C3' ATP sing 161 n n C4' H4' ATP sing 162 n n O4' C1' ATP sing 163 n n C3' O3' ATP sing 164 n n C3' C2' ATP sing 165 n n C3' H3' ATP sing 166 n n O3' HO3' ATP sing 167 n n C2' O2' ATP sing 168 n n C2' C1' ATP sing 169 n n C2' H2' ATP sing 170 n n O2' HO2' ATP sing 171 n n C1' N9 ATP sing 172 n n C1' H1' ATP sing 173 n n N9 C8 ATP sing 174 n y N9 C4 ATP sing 175 n y C8 N7 ATP doub 176 n y C8 H8 ATP sing 177 n n N7 C5 ATP sing 178 n y C5 C6 ATP sing 179 n y C5 C4 ATP doub 180 n y C6 N6 ATP sing 181 n n C6 N1 ATP doub 182 n y N6 HN61 ATP sing 183 n n N6 HN62 ATP sing 184 n n N1 C2 ATP sing 185 n y C2 N3 ATP doub 186 n y C2 H2 ATP sing 187 n n N3 C4 ATP sing 188 n y # _atom_sites.entry_id 7PW7 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 IHP A 1 3701 3702 IHP IHP . D 4 88C A 1 3702 3701 88C LIG . E 5 ATP C 1 601 601 ATP ATP . F 6 MG C 1 602 602 MG MG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ATP . . . E 5 154.764 177.509 118.374 1 72.03 ? PG ATP 601 C 1 HETATM 2 O O1G ATP . . . E 5 153.352 177.981 118.299 1 72.03 ? O1G ATP 601 C 1 HETATM 3 O O2G ATP . . . E 5 155.326 177.036 117.031 1 72.03 ? O2G ATP 601 C 1 HETATM 4 O O3G ATP . . . E 5 155.722 178.53 118.99 1 72.03 ? O3G ATP 601 C 1 HETATM 5 P PB ATP . . . E 5 155.75 175.714 120.54 1 72.03 ? PB ATP 601 C 1 HETATM 6 O O1B ATP . . . E 5 156.982 175.042 120.083 1 72.03 ? O1B ATP 601 C 1 HETATM 7 O O2B ATP . . . E 5 155.955 176.894 121.49 1 72.03 ? O2B ATP 601 C 1 HETATM 8 O O3B ATP . . . E 5 154.879 176.239 119.326 1 72.03 ? O3B ATP 601 C 1 HETATM 9 P PA ATP . . . E 5 154.015 173.351 120.877 1 72.03 ? PA ATP 601 C 1 HETATM 10 O O1A ATP . . . E 5 152.787 173.601 120.096 1 72.03 ? O1A ATP 601 C 1 HETATM 11 O O2A ATP . . . E 5 153.819 172.575 122.178 1 72.03 ? O2A ATP 601 C 1 HETATM 12 O O3A ATP . . . E 5 154.741 174.709 121.248 1 72.03 ? O3A ATP 601 C 1 HETATM 13 O O5' ATP . . . E 5 155.098 172.6 120.008 1 72.03 ? O5' ATP 601 C 1 HETATM 14 C C5' ATP . . . E 5 156.165 171.853 120.627 1 72.03 ? C5' ATP 601 C 1 HETATM 15 C C4' ATP . . . E 5 156.229 170.487 119.994 1 72.03 ? C4' ATP 601 C 1 HETATM 16 O O4' ATP . . . E 5 157.36 169.765 120.526 1 72.03 ? O4' ATP 601 C 1 HETATM 17 C C3' ATP . . . E 5 155.026 169.592 120.267 1 72.03 ? C3' ATP 601 C 1 HETATM 18 O O3' ATP . . . E 5 154.863 168.627 119.234 1 72.03 ? O3' ATP 601 C 1 HETATM 19 C C2' ATP . . . E 5 155.406 168.938 121.595 1 72.03 ? C2' ATP 601 C 1 HETATM 20 O O2' ATP . . . E 5 154.78 167.671 121.76 1 72.03 ? O2' ATP 601 C 1 HETATM 21 C C1' ATP . . . E 5 156.92 168.767 121.433 1 72.03 ? C1' ATP 601 C 1 HETATM 22 N N9 ATP . . . E 5 157.669 168.916 122.676 1 72.03 ? N9 ATP 601 C 1 HETATM 23 C C8 ATP . . . E 5 157.629 169.974 123.546 1 72.03 ? C8 ATP 601 C 1 HETATM 24 N N7 ATP . . . E 5 158.41 169.837 124.59 1 72.03 ? N7 ATP 601 C 1 HETATM 25 C C5 ATP . . . E 5 159.008 168.601 124.393 1 72.03 ? C5 ATP 601 C 1 HETATM 26 C C6 ATP . . . E 5 159.944 167.867 125.146 1 72.03 ? C6 ATP 601 C 1 HETATM 27 N N6 ATP . . . E 5 160.471 168.293 126.299 1 72.03 ? N6 ATP 601 C 1 HETATM 28 N N1 ATP . . . E 5 160.332 166.665 124.665 1 72.03 ? N1 ATP 601 C 1 HETATM 29 C C2 ATP . . . E 5 159.812 166.235 123.513 1 72.03 ? C2 ATP 601 C 1 HETATM 30 N N3 ATP . . . E 5 158.925 166.837 122.72 1 72.03 ? N3 ATP 601 C 1 HETATM 31 C C4 ATP . . . E 5 158.56 168.022 123.217 1 72.03 ? C4 ATP 601 C 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 33 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #