data_7PW8 # _model_server_result.job_id Z1dbPBWCc9g78wG4uA2e8Q _model_server_result.datetime_utc '2024-11-26 12:05:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7pw8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":3701}' # _entry.id 7PW8 # _exptl.entry_id 7PW8 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 660.035 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'INOSITOL HEXAKISPHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7PW8 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PW8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C OG SER 218 C SER 218 1_555 G MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc2 C OG1 THR 253 C THR 253 1_555 G MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc3 F O1G ATP . C ATP 601 1_555 G MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.509 ? metalc ? metalc4 F O3B ATP . C ATP 601 1_555 G MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.587 ? # _chem_comp.formula 'C6 H18 O24 P6' _chem_comp.formula_weight 660.035 _chem_comp.id IHP _chem_comp.mon_nstd_flag . _chem_comp.name 'INOSITOL HEXAKISPHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'MYO-INOSITOL HEXAKISPHOSPHATE;INOSITOL 1,2,3,4,5,6-HEXAKISPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IHP sing 249 n n C1 C6 IHP sing 250 n n C1 O11 IHP sing 251 n n C1 H1 IHP sing 252 n n C2 C3 IHP sing 253 n n C2 O12 IHP sing 254 n n C2 H2 IHP sing 255 n n C3 C4 IHP sing 256 n n C3 O13 IHP sing 257 n n C3 H3 IHP sing 258 n n C4 C5 IHP sing 259 n n C4 O14 IHP sing 260 n n C4 H4 IHP sing 261 n n C5 C6 IHP sing 262 n n C5 O15 IHP sing 263 n n C5 H5 IHP sing 264 n n C6 O16 IHP sing 265 n n C6 H6 IHP sing 266 n n O11 P1 IHP sing 267 n n P1 O21 IHP doub 268 n n P1 O31 IHP sing 269 n n P1 O41 IHP sing 270 n n O31 H31 IHP sing 271 n n O41 H41 IHP sing 272 n n O12 P2 IHP sing 273 n n P2 O22 IHP doub 274 n n P2 O32 IHP sing 275 n n P2 O42 IHP sing 276 n n O32 H32 IHP sing 277 n n O42 H42 IHP sing 278 n n O13 P3 IHP sing 279 n n P3 O23 IHP doub 280 n n P3 O33 IHP sing 281 n n P3 O43 IHP sing 282 n n O33 H33 IHP sing 283 n n O43 H43 IHP sing 284 n n O14 P4 IHP sing 285 n n P4 O24 IHP doub 286 n n P4 O34 IHP sing 287 n n P4 O44 IHP sing 288 n n O34 H34 IHP sing 289 n n O44 H44 IHP sing 290 n n O15 P5 IHP sing 291 n n P5 O25 IHP doub 292 n n P5 O35 IHP sing 293 n n P5 O45 IHP sing 294 n n O35 H35 IHP sing 295 n n O45 H45 IHP sing 296 n n O16 P6 IHP sing 297 n n P6 O26 IHP doub 298 n n P6 O36 IHP sing 299 n n P6 O46 IHP sing 300 n n O36 H36 IHP sing 301 n n O46 H46 IHP sing 302 n n # _atom_sites.entry_id 7PW8 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 IHP A 1 3701 3702 IHP IHP . E 5 ANP A 1 3702 3701 ANP ANP . F 6 ATP C 1 601 601 ATP ATP . G 7 MG C 1 602 602 MG MG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IHP . . . D 4 130.325 163.774 116.015 1 141.08 ? C1 IHP 3701 A 1 HETATM 2 C C2 IHP . . . D 4 130.506 164.632 117.276 1 141.08 ? C2 IHP 3701 A 1 HETATM 3 C C3 IHP . . . D 4 131.784 164.324 118.083 1 141.08 ? C3 IHP 3701 A 1 HETATM 4 C C4 IHP . . . D 4 133.04 163.963 117.247 1 141.08 ? C4 IHP 3701 A 1 HETATM 5 C C5 IHP . . . D 4 132.765 163.039 116.047 1 141.08 ? C5 IHP 3701 A 1 HETATM 6 C C6 IHP . . . D 4 131.305 162.593 115.907 1 141.08 ? C6 IHP 3701 A 1 HETATM 7 O O11 IHP . . . D 4 129.02 163.251 116.024 1 141.08 ? O11 IHP 3701 A 1 HETATM 8 P P1 IHP . . . D 4 128.217 163.093 114.595 1 141.08 ? P1 IHP 3701 A 1 HETATM 9 O O21 IHP . . . D 4 127.782 164.455 114.114 1 141.08 ? O21 IHP 3701 A 1 HETATM 10 O O31 IHP . . . D 4 129.12 162.462 113.563 1 141.08 ? O31 IHP 3701 A 1 HETATM 11 O O41 IHP . . . D 4 127.01 162.213 114.806 1 141.08 ? O41 IHP 3701 A 1 HETATM 12 O O12 IHP . . . D 4 129.395 164.39 118.106 1 141.08 ? O12 IHP 3701 A 1 HETATM 13 P P2 IHP . . . D 4 128.421 165.645 118.542 1 141.08 ? P2 IHP 3701 A 1 HETATM 14 O O22 IHP . . . D 4 127.177 165.646 117.689 1 141.08 ? O22 IHP 3701 A 1 HETATM 15 O O32 IHP . . . D 4 128.031 165.497 119.993 1 141.08 ? O32 IHP 3701 A 1 HETATM 16 O O42 IHP . . . D 4 129.162 166.943 118.351 1 141.08 ? O42 IHP 3701 A 1 HETATM 17 O O13 IHP . . . D 4 132.043 165.331 119.051 1 141.08 ? O13 IHP 3701 A 1 HETATM 18 P P3 IHP . . . D 4 132.357 166.924 118.729 1 141.08 ? P3 IHP 3701 A 1 HETATM 19 O O23 IHP . . . D 4 131.953 167.32 117.33 1 141.08 ? O23 IHP 3701 A 1 HETATM 20 O O33 IHP . . . D 4 131.605 167.778 119.72 1 141.08 ? O33 IHP 3701 A 1 HETATM 21 O O43 IHP . . . D 4 133.836 167.172 118.901 1 141.08 ? O43 IHP 3701 A 1 HETATM 22 O O14 IHP . . . D 4 133.71 165.101 116.761 1 141.08 ? O14 IHP 3701 A 1 HETATM 23 P P4 IHP . . . D 4 135.36 165.071 116.749 1 141.08 ? P4 IHP 3701 A 1 HETATM 24 O O24 IHP . . . D 4 135.872 166.127 115.798 1 141.08 ? O24 IHP 3701 A 1 HETATM 25 O O34 IHP . . . D 4 135.878 165.356 118.138 1 141.08 ? O34 IHP 3701 A 1 HETATM 26 O O44 IHP . . . D 4 135.857 163.715 116.307 1 141.08 ? O44 IHP 3701 A 1 HETATM 27 O O15 IHP . . . D 4 133.134 163.72 114.872 1 141.08 ? O15 IHP 3701 A 1 HETATM 28 P P5 IHP . . . D 4 133.908 162.882 113.683 1 141.08 ? P5 IHP 3701 A 1 HETATM 29 O O25 IHP . . . D 4 133.138 163.012 112.392 1 141.08 ? O25 IHP 3701 A 1 HETATM 30 O O35 IHP . . . D 4 135.299 163.439 113.496 1 141.08 ? O35 IHP 3701 A 1 HETATM 31 O O45 IHP . . . D 4 133.995 161.425 114.071 1 141.08 ? O45 IHP 3701 A 1 HETATM 32 O O16 IHP . . . D 4 131 161.611 116.872 1 141.08 ? O16 IHP 3701 A 1 HETATM 33 P P6 IHP . . . D 4 131.639 160.104 116.694 1 141.08 ? P6 IHP 3701 A 1 HETATM 34 O O26 IHP . . . D 4 133.021 160.061 117.301 1 141.08 ? O26 IHP 3701 A 1 HETATM 35 O O36 IHP . . . D 4 130.755 159.098 117.39 1 141.08 ? O36 IHP 3701 A 1 HETATM 36 O O46 IHP . . . D 4 131.726 159.768 115.224 1 141.08 ? O46 IHP 3701 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 107 _model_server_stats.query_time_ms 1171 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 36 #