data_7PW9 # _model_server_result.job_id ldSIZzVTw5GWeb3y8itdlA _model_server_result.datetime_utc '2024-12-27 03:35:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7pw9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 7PW9 # _exptl.entry_id 7PW9 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 507.181 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7PW9 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PW9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 1613 A LYS 1617 1_555 D O34 IHP . A IHP 3702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.297 ? metalc ? metalc1 E O1G ATP . C ATP 601 1_555 F MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc2 E O3B ATP . C ATP 601 1_555 F MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc3 E O1A ATP . C ATP 601 1_555 F MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc4 E O3A ATP . C ATP 601 1_555 F MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? # _chem_comp.formula 'C10 H16 N5 O13 P3' _chem_comp.formula_weight 507.181 _chem_comp.id ATP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7PW9 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ANP A 1 3701 3701 ANP ANP . D 4 IHP A 1 3702 3702 IHP IHP . E 5 ATP C 1 601 601 ATP ATP . F 6 MG C 1 602 602 MG MG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ATP . . . E 5 137.155 129.506 189.69 1 46.46 ? PG ATP 601 C 1 HETATM 2 O O1G ATP . . . E 5 136.015 129.027 188.861 1 46.46 ? O1G ATP 601 C 1 HETATM 3 O O2G ATP . . . E 5 136.839 129.599 191.185 1 46.46 ? O2G ATP 601 C 1 HETATM 4 O O3G ATP . . . E 5 138.435 128.691 189.497 1 46.46 ? O3G ATP 601 C 1 HETATM 5 P PB ATP . . . E 5 138.336 131.752 188.122 1 46.46 ? PB ATP 601 C 1 HETATM 6 O O1B ATP . . . E 5 139.157 132.859 188.642 1 46.46 ? O1B ATP 601 C 1 HETATM 7 O O2B ATP . . . E 5 139.086 130.698 187.311 1 46.46 ? O2B ATP 601 C 1 HETATM 8 O O3B ATP . . . E 5 137.561 130.988 189.274 1 46.46 ? O3B ATP 601 C 1 HETATM 9 P PA ATP . . . E 5 135.906 133.261 187.395 1 46.46 ? PA ATP 601 C 1 HETATM 10 O O1A ATP . . . E 5 134.734 132.545 187.936 1 46.46 ? O1A ATP 601 C 1 HETATM 11 O O2A ATP . . . E 5 135.682 133.951 186.051 1 46.46 ? O2A ATP 601 C 1 HETATM 12 O O3A ATP . . . E 5 137.137 132.281 187.219 1 46.46 ? O3A ATP 601 C 1 HETATM 13 O O5' ATP . . . E 5 136.444 134.327 188.428 1 46.46 ? O5' ATP 601 C 1 HETATM 14 C C5' ATP . . . E 5 137.275 135.428 188.005 1 46.46 ? C5' ATP 601 C 1 HETATM 15 C C4' ATP . . . E 5 136.735 136.704 188.597 1 46.46 ? C4' ATP 601 C 1 HETATM 16 O O4' ATP . . . E 5 137.501 137.824 188.104 1 46.46 ? O4' ATP 601 C 1 HETATM 17 C C3' ATP . . . E 5 135.29 137.026 188.237 1 46.46 ? C3' ATP 601 C 1 HETATM 18 O O3' ATP . . . E 5 134.681 137.833 189.237 1 46.46 ? O3' ATP 601 C 1 HETATM 19 C C2' ATP . . . E 5 135.445 137.779 186.915 1 46.46 ? C2' ATP 601 C 1 HETATM 20 O O2' ATP . . . E 5 134.366 138.678 186.688 1 46.46 ? O2' ATP 601 C 1 HETATM 21 C C1' ATP . . . E 5 136.748 138.55 187.146 1 46.46 ? C1' ATP 601 C 1 HETATM 22 N N9 ATP . . . E 5 137.562 138.704 185.947 1 46.46 ? N9 ATP 601 C 1 HETATM 23 C C8 ATP . . . E 5 138.211 137.713 185.258 1 46.46 ? C8 ATP 601 C 1 HETATM 24 N N7 ATP . . . E 5 138.871 138.134 184.207 1 46.46 ? N7 ATP 601 C 1 HETATM 25 C C5 ATP . . . E 5 138.643 139.502 184.204 1 46.46 ? C5 ATP 601 C 1 HETATM 26 C C6 ATP . . . E 5 139.068 140.535 183.346 1 46.46 ? C6 ATP 601 C 1 HETATM 27 N N6 ATP . . . E 5 139.847 140.341 182.278 1 46.46 ? N6 ATP 601 C 1 HETATM 28 N N1 ATP . . . E 5 138.659 141.792 183.626 1 46.46 ? N1 ATP 601 C 1 HETATM 29 C C2 ATP . . . E 5 137.881 141.993 184.691 1 46.46 ? C2 ATP 601 C 1 HETATM 30 N N3 ATP . . . E 5 137.418 141.101 185.57 1 46.46 ? N3 ATP 601 C 1 HETATM 31 C C4 ATP . . . E 5 137.837 139.867 185.27 1 46.46 ? C4 ATP 601 C 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #