data_7PWR # _model_server_result.job_id t60gWa-pDx0bIRdSreAAxg _model_server_result.datetime_utc '2024-11-12 21:15:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7pwr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":702}' # _entry.id 7PWR # _exptl.entry_id 7PWR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 118.174 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4S)-2-METHYL-2,4-PENTANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7PWR _cell.length_a 45.37 _cell.length_b 69.06 _cell.length_c 160.26 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PWR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H14 O2' _chem_comp.formula_weight 118.174 _chem_comp.id MPD _chem_comp.mon_nstd_flag . _chem_comp.name (4S)-2-METHYL-2,4-PENTANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MPD sing 272 n n C1 H11 MPD sing 273 n n C1 H12 MPD sing 274 n n C1 H13 MPD sing 275 n n C2 O2 MPD sing 276 n n C2 CM MPD sing 277 n n C2 C3 MPD sing 278 n n O2 HO2 MPD sing 279 n n CM HM1 MPD sing 280 n n CM HM2 MPD sing 281 n n CM HM3 MPD sing 282 n n C3 C4 MPD sing 283 n n C3 H31 MPD sing 284 n n C3 H32 MPD sing 285 n n C4 O4 MPD sing 286 n n C4 C5 MPD sing 287 n n C4 H4 MPD sing 288 n n O4 HO4 MPD sing 289 n n C5 H51 MPD sing 290 n n C5 H52 MPD sing 291 n n C5 H53 MPD sing 292 n n # _atom_sites.entry_id 7PWR _atom_sites.fract_transf_matrix[1][1] 0.022041 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01448 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00624 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 89Z A 1 701 701 89Z DRG . D 3 MPD A 1 702 702 MPD MPD . E 4 HOH A 1 801 298 HOH HOH . E 4 HOH A 2 802 280 HOH HOH . E 4 HOH A 3 803 264 HOH HOH . E 4 HOH A 4 804 87 HOH HOH . E 4 HOH A 5 805 237 HOH HOH . E 4 HOH A 6 806 183 HOH HOH . E 4 HOH A 7 807 297 HOH HOH . E 4 HOH A 8 808 154 HOH HOH . E 4 HOH A 9 809 83 HOH HOH . E 4 HOH A 10 810 312 HOH HOH . E 4 HOH A 11 811 287 HOH HOH . E 4 HOH A 12 812 171 HOH HOH . E 4 HOH A 13 813 147 HOH HOH . E 4 HOH A 14 814 198 HOH HOH . E 4 HOH A 15 815 179 HOH HOH . E 4 HOH A 16 816 268 HOH HOH . E 4 HOH A 17 817 108 HOH HOH . E 4 HOH A 18 818 141 HOH HOH . E 4 HOH A 19 819 189 HOH HOH . E 4 HOH A 20 820 82 HOH HOH . E 4 HOH A 21 821 240 HOH HOH . E 4 HOH A 22 822 309 HOH HOH . E 4 HOH A 23 823 88 HOH HOH . E 4 HOH A 24 824 32 HOH HOH . E 4 HOH A 25 825 136 HOH HOH . E 4 HOH A 26 826 139 HOH HOH . E 4 HOH A 27 827 160 HOH HOH . E 4 HOH A 28 828 64 HOH HOH . E 4 HOH A 29 829 24 HOH HOH . E 4 HOH A 30 830 43 HOH HOH . E 4 HOH A 31 831 91 HOH HOH . E 4 HOH A 32 832 285 HOH HOH . E 4 HOH A 33 833 22 HOH HOH . E 4 HOH A 34 834 175 HOH HOH . E 4 HOH A 35 835 149 HOH HOH . E 4 HOH A 36 836 97 HOH HOH . E 4 HOH A 37 837 292 HOH HOH . E 4 HOH A 38 838 42 HOH HOH . E 4 HOH A 39 839 27 HOH HOH . E 4 HOH A 40 840 140 HOH HOH . E 4 HOH A 41 841 159 HOH HOH . E 4 HOH A 42 842 133 HOH HOH . E 4 HOH A 43 843 74 HOH HOH . E 4 HOH A 44 844 6 HOH HOH . E 4 HOH A 45 845 100 HOH HOH . E 4 HOH A 46 846 315 HOH HOH . E 4 HOH A 47 847 112 HOH HOH . E 4 HOH A 48 848 168 HOH HOH . E 4 HOH A 49 849 145 HOH HOH . E 4 HOH A 50 850 121 HOH HOH . E 4 HOH A 51 851 69 HOH HOH . E 4 HOH A 52 852 259 HOH HOH . E 4 HOH A 53 853 247 HOH HOH . E 4 HOH A 54 854 155 HOH HOH . E 4 HOH A 55 855 51 HOH HOH . E 4 HOH A 56 856 238 HOH HOH . E 4 HOH A 57 857 138 HOH HOH . E 4 HOH A 58 858 185 HOH HOH . E 4 HOH A 59 859 81 HOH HOH . E 4 HOH A 60 860 103 HOH HOH . E 4 HOH A 61 861 52 HOH HOH . E 4 HOH A 62 862 262 HOH HOH . E 4 HOH A 63 863 222 HOH HOH . E 4 HOH A 64 864 25 HOH HOH . E 4 HOH A 65 865 59 HOH HOH . E 4 HOH A 66 866 41 HOH HOH . E 4 HOH A 67 867 79 HOH HOH . E 4 HOH A 68 868 70 HOH HOH . E 4 HOH A 69 869 230 HOH HOH . E 4 HOH A 70 870 296 HOH HOH . E 4 HOH A 71 871 308 HOH HOH . E 4 HOH A 72 872 182 HOH HOH . E 4 HOH A 73 873 17 HOH HOH . E 4 HOH A 74 874 170 HOH HOH . E 4 HOH A 75 875 119 HOH HOH . E 4 HOH A 76 876 162 HOH HOH . E 4 HOH A 77 877 85 HOH HOH . E 4 HOH A 78 878 65 HOH HOH . E 4 HOH A 79 879 105 HOH HOH . E 4 HOH A 80 880 218 HOH HOH . E 4 HOH A 81 881 107 HOH HOH . E 4 HOH A 82 882 232 HOH HOH . E 4 HOH A 83 883 157 HOH HOH . E 4 HOH A 84 884 235 HOH HOH . E 4 HOH A 85 885 77 HOH HOH . E 4 HOH A 86 886 124 HOH HOH . E 4 HOH A 87 887 12 HOH HOH . E 4 HOH A 88 888 44 HOH HOH . E 4 HOH A 89 889 303 HOH HOH . E 4 HOH A 90 890 252 HOH HOH . E 4 HOH A 91 891 31 HOH HOH . E 4 HOH A 92 892 48 HOH HOH . E 4 HOH A 93 893 4 HOH HOH . E 4 HOH A 94 894 207 HOH HOH . E 4 HOH A 95 895 101 HOH HOH . E 4 HOH A 96 896 10 HOH HOH . E 4 HOH A 97 897 150 HOH HOH . E 4 HOH A 98 898 13 HOH HOH . E 4 HOH A 99 899 258 HOH HOH . E 4 HOH A 100 900 199 HOH HOH . E 4 HOH A 101 901 166 HOH HOH . E 4 HOH A 102 902 89 HOH HOH . E 4 HOH A 103 903 109 HOH HOH . E 4 HOH A 104 904 58 HOH HOH . E 4 HOH A 105 905 269 HOH HOH . E 4 HOH A 106 906 209 HOH HOH . E 4 HOH A 107 907 314 HOH HOH . E 4 HOH A 108 908 284 HOH HOH . E 4 HOH A 109 909 197 HOH HOH . E 4 HOH A 110 910 225 HOH HOH . E 4 HOH A 111 911 193 HOH HOH . E 4 HOH A 112 912 56 HOH HOH . E 4 HOH A 113 913 73 HOH HOH . E 4 HOH A 114 914 16 HOH HOH . E 4 HOH A 115 915 201 HOH HOH . E 4 HOH A 116 916 28 HOH HOH . E 4 HOH A 117 917 50 HOH HOH . E 4 HOH A 118 918 38 HOH HOH . E 4 HOH A 119 919 236 HOH HOH . E 4 HOH A 120 920 21 HOH HOH . E 4 HOH A 121 921 206 HOH HOH . E 4 HOH A 122 922 278 HOH HOH . E 4 HOH A 123 923 191 HOH HOH . E 4 HOH A 124 924 239 HOH HOH . E 4 HOH A 125 925 161 HOH HOH . E 4 HOH A 126 926 214 HOH HOH . E 4 HOH A 127 927 291 HOH HOH . E 4 HOH A 128 928 274 HOH HOH . E 4 HOH A 129 929 245 HOH HOH . E 4 HOH A 130 930 275 HOH HOH . E 4 HOH A 131 931 195 HOH HOH . E 4 HOH A 132 932 294 HOH HOH . E 4 HOH A 133 933 261 HOH HOH . E 4 HOH A 134 934 192 HOH HOH . E 4 HOH A 135 935 114 HOH HOH . E 4 HOH A 136 936 128 HOH HOH . E 4 HOH A 137 937 163 HOH HOH . E 4 HOH A 138 938 307 HOH HOH . E 4 HOH A 139 939 266 HOH HOH . F 4 HOH B 1 701 212 HOH HOH . F 4 HOH B 2 702 153 HOH HOH . F 4 HOH B 3 703 196 HOH HOH . F 4 HOH B 4 704 148 HOH HOH . F 4 HOH B 5 705 289 HOH HOH . F 4 HOH B 6 706 172 HOH HOH . F 4 HOH B 7 707 248 HOH HOH . F 4 HOH B 8 708 310 HOH HOH . F 4 HOH B 9 709 313 HOH HOH . F 4 HOH B 10 710 118 HOH HOH . F 4 HOH B 11 711 180 HOH HOH . F 4 HOH B 12 712 233 HOH HOH . F 4 HOH B 13 713 200 HOH HOH . F 4 HOH B 14 714 181 HOH HOH . F 4 HOH B 15 715 227 HOH HOH . F 4 HOH B 16 716 39 HOH HOH . F 4 HOH B 17 717 36 HOH HOH . F 4 HOH B 18 718 204 HOH HOH . F 4 HOH B 19 719 113 HOH HOH . F 4 HOH B 20 720 99 HOH HOH . F 4 HOH B 21 721 226 HOH HOH . F 4 HOH B 22 722 169 HOH HOH . F 4 HOH B 23 723 134 HOH HOH . F 4 HOH B 24 724 316 HOH HOH . F 4 HOH B 25 725 131 HOH HOH . F 4 HOH B 26 726 61 HOH HOH . F 4 HOH B 27 727 255 HOH HOH . F 4 HOH B 28 728 194 HOH HOH . F 4 HOH B 29 729 272 HOH HOH . F 4 HOH B 30 730 94 HOH HOH . F 4 HOH B 31 731 305 HOH HOH . F 4 HOH B 32 732 143 HOH HOH . F 4 HOH B 33 733 120 HOH HOH . F 4 HOH B 34 734 116 HOH HOH . F 4 HOH B 35 735 283 HOH HOH . F 4 HOH B 36 736 265 HOH HOH . F 4 HOH B 37 737 7 HOH HOH . F 4 HOH B 38 738 216 HOH HOH . F 4 HOH B 39 739 18 HOH HOH . F 4 HOH B 40 740 234 HOH HOH . F 4 HOH B 41 741 267 HOH HOH . F 4 HOH B 42 742 90 HOH HOH . F 4 HOH B 43 743 243 HOH HOH . F 4 HOH B 44 744 126 HOH HOH . F 4 HOH B 45 745 130 HOH HOH . F 4 HOH B 46 746 49 HOH HOH . F 4 HOH B 47 747 123 HOH HOH . F 4 HOH B 48 748 45 HOH HOH . F 4 HOH B 49 749 106 HOH HOH . F 4 HOH B 50 750 220 HOH HOH . F 4 HOH B 51 751 95 HOH HOH . F 4 HOH B 52 752 78 HOH HOH . F 4 HOH B 53 753 202 HOH HOH . F 4 HOH B 54 754 142 HOH HOH . F 4 HOH B 55 755 279 HOH HOH . F 4 HOH B 56 756 263 HOH HOH . F 4 HOH B 57 757 29 HOH HOH . F 4 HOH B 58 758 241 HOH HOH . F 4 HOH B 59 759 187 HOH HOH . F 4 HOH B 60 760 15 HOH HOH . F 4 HOH B 61 761 30 HOH HOH . F 4 HOH B 62 762 71 HOH HOH . F 4 HOH B 63 763 231 HOH HOH . F 4 HOH B 64 764 35 HOH HOH . F 4 HOH B 65 765 84 HOH HOH . F 4 HOH B 66 766 3 HOH HOH . F 4 HOH B 67 767 11 HOH HOH . F 4 HOH B 68 768 253 HOH HOH . F 4 HOH B 69 769 23 HOH HOH . F 4 HOH B 70 770 164 HOH HOH . F 4 HOH B 71 771 9 HOH HOH . F 4 HOH B 72 772 76 HOH HOH . F 4 HOH B 73 773 144 HOH HOH . F 4 HOH B 74 774 63 HOH HOH . F 4 HOH B 75 775 86 HOH HOH . F 4 HOH B 76 776 173 HOH HOH . F 4 HOH B 77 777 125 HOH HOH . F 4 HOH B 78 778 66 HOH HOH . F 4 HOH B 79 779 246 HOH HOH . F 4 HOH B 80 780 8 HOH HOH . F 4 HOH B 81 781 251 HOH HOH . F 4 HOH B 82 782 229 HOH HOH . F 4 HOH B 83 783 137 HOH HOH . F 4 HOH B 84 784 98 HOH HOH . F 4 HOH B 85 785 190 HOH HOH . F 4 HOH B 86 786 281 HOH HOH . F 4 HOH B 87 787 127 HOH HOH . F 4 HOH B 88 788 152 HOH HOH . F 4 HOH B 89 789 210 HOH HOH . F 4 HOH B 90 790 242 HOH HOH . F 4 HOH B 91 791 26 HOH HOH . F 4 HOH B 92 792 5 HOH HOH . F 4 HOH B 93 793 104 HOH HOH . F 4 HOH B 94 794 151 HOH HOH . F 4 HOH B 95 795 257 HOH HOH . F 4 HOH B 96 796 93 HOH HOH . F 4 HOH B 97 797 34 HOH HOH . F 4 HOH B 98 798 75 HOH HOH . F 4 HOH B 99 799 72 HOH HOH . F 4 HOH B 100 800 60 HOH HOH . F 4 HOH B 101 801 203 HOH HOH . F 4 HOH B 102 802 221 HOH HOH . F 4 HOH B 103 803 132 HOH HOH . F 4 HOH B 104 804 156 HOH HOH . F 4 HOH B 105 805 129 HOH HOH . F 4 HOH B 106 806 117 HOH HOH . F 4 HOH B 107 807 176 HOH HOH . F 4 HOH B 108 808 205 HOH HOH . F 4 HOH B 109 809 55 HOH HOH . F 4 HOH B 110 810 54 HOH HOH . F 4 HOH B 111 811 224 HOH HOH . F 4 HOH B 112 812 80 HOH HOH . F 4 HOH B 113 813 304 HOH HOH . F 4 HOH B 114 814 20 HOH HOH . F 4 HOH B 115 815 37 HOH HOH . F 4 HOH B 116 816 177 HOH HOH . F 4 HOH B 117 817 96 HOH HOH . F 4 HOH B 118 818 282 HOH HOH . F 4 HOH B 119 819 53 HOH HOH . F 4 HOH B 120 820 19 HOH HOH . F 4 HOH B 121 821 228 HOH HOH . F 4 HOH B 122 822 211 HOH HOH . F 4 HOH B 123 823 184 HOH HOH . F 4 HOH B 124 824 135 HOH HOH . F 4 HOH B 125 825 311 HOH HOH . F 4 HOH B 126 826 244 HOH HOH . F 4 HOH B 127 827 288 HOH HOH . F 4 HOH B 128 828 223 HOH HOH . F 4 HOH B 129 829 1 HOH HOH . F 4 HOH B 130 830 68 HOH HOH . F 4 HOH B 131 831 213 HOH HOH . F 4 HOH B 132 832 254 HOH HOH . F 4 HOH B 133 833 67 HOH HOH . F 4 HOH B 134 834 40 HOH HOH . F 4 HOH B 135 835 46 HOH HOH . F 4 HOH B 136 836 165 HOH HOH . F 4 HOH B 137 837 219 HOH HOH . F 4 HOH B 138 838 14 HOH HOH . F 4 HOH B 139 839 47 HOH HOH . F 4 HOH B 140 840 2 HOH HOH . F 4 HOH B 141 841 62 HOH HOH . F 4 HOH B 142 842 33 HOH HOH . F 4 HOH B 143 843 306 HOH HOH . F 4 HOH B 144 844 158 HOH HOH . F 4 HOH B 145 845 277 HOH HOH . F 4 HOH B 146 846 178 HOH HOH . F 4 HOH B 147 847 300 HOH HOH . F 4 HOH B 148 848 293 HOH HOH . F 4 HOH B 149 849 102 HOH HOH . F 4 HOH B 150 850 188 HOH HOH . F 4 HOH B 151 851 215 HOH HOH . F 4 HOH B 152 852 260 HOH HOH . F 4 HOH B 153 853 92 HOH HOH . F 4 HOH B 154 854 299 HOH HOH . F 4 HOH B 155 855 249 HOH HOH . F 4 HOH B 156 856 295 HOH HOH . F 4 HOH B 157 857 115 HOH HOH . F 4 HOH B 158 858 276 HOH HOH . F 4 HOH B 159 859 302 HOH HOH . F 4 HOH B 160 860 286 HOH HOH . F 4 HOH B 161 861 270 HOH HOH . F 4 HOH B 162 862 57 HOH HOH . F 4 HOH B 163 863 290 HOH HOH . F 4 HOH B 164 864 217 HOH HOH . F 4 HOH B 165 865 186 HOH HOH . F 4 HOH B 166 866 271 HOH HOH . F 4 HOH B 167 867 122 HOH HOH . F 4 HOH B 168 868 301 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MPD . . . D 3 -17.163 -16.617 19.404 1 35.75 ? C1 MPD 702 A 1 HETATM 2 C C2 MPD . . . D 3 -17.661 -15.492 18.503 1 27.32 ? C2 MPD 702 A 1 HETATM 3 O O2 MPD . . . D 3 -18.31 -16.096 17.359 1 24.41 ? O2 MPD 702 A 1 HETATM 4 C CM MPD . . . D 3 -16.503 -14.675 17.939 1 29.22 ? CM MPD 702 A 1 HETATM 5 C C3 MPD . . . D 3 -18.685 -14.616 19.244 1 34.4 ? C3 MPD 702 A 1 HETATM 6 C C4 MPD . . . D 3 -18.103 -13.757 20.37 1 37.46 ? C4 MPD 702 A 1 HETATM 7 O O4 MPD . . . D 3 -17.696 -12.452 19.89 1 32.06 ? O4 MPD 702 A 1 HETATM 8 C C5 MPD . . . D 3 -19.024 -13.557 21.545 1 32.45 ? C5 MPD 702 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 365 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 8 #