data_7PWX # _model_server_result.job_id HqstDueyAbC7u2agDkTJ-A _model_server_result.datetime_utc '2024-10-13 18:17:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7pwx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":202}' # _entry.id 7PWX # _exptl.entry_id 7PWX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.85 _cell.angle_gamma 90 _cell.entry_id 7PWX _cell.length_a 79.407 _cell.length_b 150.429 _cell.length_c 107.37 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PWX _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? hexameric 6 author_defined_assembly 1 ? hexameric 6 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,I,J,K,M,N,O,P,Q,R,S,Z,AA,BA,CA,DA,EA,KA,LA,MA 1 1 D,E,F,G,H,L,T,U,V,W,X,Y,FA,GA,HA,IA,JA,NA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 M N N ? 3 O N N ? 3 U N N ? 3 V N N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 318 n n C C2 TRS sing 319 n n C C3 TRS sing 320 n n C N TRS sing 321 n n C1 O1 TRS sing 322 n n C1 H11 TRS sing 323 n n C1 H12 TRS sing 324 n n C2 O2 TRS sing 325 n n C2 H21 TRS sing 326 n n C2 H22 TRS sing 327 n n C3 O3 TRS sing 328 n n C3 H31 TRS sing 329 n n C3 H32 TRS sing 330 n n N HN1 TRS sing 331 n n N HN2 TRS sing 332 n n N HN3 TRS sing 333 n n O1 HO1 TRS sing 334 n n O2 HO2 TRS sing 335 n n O3 HO3 TRS sing 336 n n # _atom_sites.entry_id 7PWX _atom_sites.fract_transf_matrix[1][1] 0.012593 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001961 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006648 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009426 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 3 TRS HHH 1 201 10 TRS TRS . N 4 EDO III 1 201 9 EDO EDO . O 3 TRS JJJ 1 201 3 TRS TRS . P 5 PEG JJJ 1 202 6 PEG PEG . Q 4 EDO JJJ 1 203 8 EDO EDO . R 4 EDO JJJ 1 204 10 EDO EDO . S 4 EDO JJJ 1 205 11 EDO EDO . T 5 PEG KKK 1 201 3 PEG PEG . U 3 TRS LLL 1 201 8 TRS TRS . V 3 TRS LLL 1 202 11 TRS TRS . W 5 PEG MMM 1 201 5 PEG PEG . X 4 EDO DDD 1 201 6 EDO EDO . Y 4 EDO DDD 1 202 12 EDO EDO . Z 5 PEG FFF 1 201 4 PEG PEG . AA 4 EDO FFF 1 202 13 EDO EDO . BA 4 EDO GGG 1 201 4 EDO EDO . CA 6 HOH HHH 1 301 8 HOH HOH . CA 6 HOH HHH 2 302 227 HOH HOH . CA 6 HOH HHH 3 303 186 HOH HOH . CA 6 HOH HHH 4 304 46 HOH HOH . CA 6 HOH HHH 5 305 246 HOH HOH . CA 6 HOH HHH 6 306 198 HOH HOH . CA 6 HOH HHH 7 307 242 HOH HOH . DA 6 HOH III 1 301 156 HOH HOH . DA 6 HOH III 2 302 125 HOH HOH . DA 6 HOH III 3 303 7 HOH HOH . DA 6 HOH III 4 304 17 HOH HOH . DA 6 HOH III 5 305 19 HOH HOH . DA 6 HOH III 6 306 18 HOH HOH . DA 6 HOH III 7 307 22 HOH HOH . DA 6 HOH III 8 308 166 HOH HOH . EA 6 HOH JJJ 1 301 271 HOH HOH . EA 6 HOH JJJ 2 302 128 HOH HOH . EA 6 HOH JJJ 3 303 250 HOH HOH . EA 6 HOH JJJ 4 304 82 HOH HOH . EA 6 HOH JJJ 5 305 229 HOH HOH . EA 6 HOH JJJ 6 306 212 HOH HOH . EA 6 HOH JJJ 7 307 172 HOH HOH . EA 6 HOH JJJ 8 308 199 HOH HOH . EA 6 HOH JJJ 9 309 195 HOH HOH . FA 6 HOH KKK 1 301 273 HOH HOH . FA 6 HOH KKK 2 302 182 HOH HOH . GA 6 HOH LLL 1 301 260 HOH HOH . GA 6 HOH LLL 2 302 70 HOH HOH . GA 6 HOH LLL 3 303 235 HOH HOH . GA 6 HOH LLL 4 304 2 HOH HOH . GA 6 HOH LLL 5 305 240 HOH HOH . GA 6 HOH LLL 6 306 236 HOH HOH . GA 6 HOH LLL 7 307 261 HOH HOH . GA 6 HOH LLL 8 308 238 HOH HOH . HA 6 HOH MMM 1 301 262 HOH HOH . HA 6 HOH MMM 2 302 135 HOH HOH . HA 6 HOH MMM 3 303 13 HOH HOH . HA 6 HOH MMM 4 304 67 HOH HOH . HA 6 HOH MMM 5 305 44 HOH HOH . HA 6 HOH MMM 6 306 196 HOH HOH . HA 6 HOH MMM 7 307 255 HOH HOH . IA 6 HOH CCC 1 201 219 HOH HOH . IA 6 HOH CCC 2 202 6 HOH HOH . IA 6 HOH CCC 3 203 218 HOH HOH . IA 6 HOH CCC 4 204 160 HOH HOH . IA 6 HOH CCC 5 205 263 HOH HOH . IA 6 HOH CCC 6 206 73 HOH HOH . IA 6 HOH CCC 7 207 185 HOH HOH . JA 6 HOH DDD 1 301 181 HOH HOH . JA 6 HOH DDD 2 302 175 HOH HOH . JA 6 HOH DDD 3 303 200 HOH HOH . JA 6 HOH DDD 4 304 247 HOH HOH . JA 6 HOH DDD 5 305 249 HOH HOH . JA 6 HOH DDD 6 306 131 HOH HOH . JA 6 HOH DDD 7 307 202 HOH HOH . JA 6 HOH DDD 8 308 216 HOH HOH . JA 6 HOH DDD 9 309 237 HOH HOH . JA 6 HOH DDD 10 310 15 HOH HOH . JA 6 HOH DDD 11 311 76 HOH HOH . JA 6 HOH DDD 12 312 248 HOH HOH . KA 6 HOH EEE 1 201 274 HOH HOH . KA 6 HOH EEE 2 202 81 HOH HOH . KA 6 HOH EEE 3 203 234 HOH HOH . KA 6 HOH EEE 4 204 80 HOH HOH . LA 6 HOH FFF 1 301 5 HOH HOH . LA 6 HOH FFF 2 302 275 HOH HOH . LA 6 HOH FFF 3 303 154 HOH HOH . LA 6 HOH FFF 4 304 157 HOH HOH . LA 6 HOH FFF 5 305 190 HOH HOH . LA 6 HOH FFF 6 306 204 HOH HOH . LA 6 HOH FFF 7 307 11 HOH HOH . LA 6 HOH FFF 8 308 265 HOH HOH . LA 6 HOH FFF 9 309 232 HOH HOH . LA 6 HOH FFF 10 310 12 HOH HOH . LA 6 HOH FFF 11 311 192 HOH HOH . LA 6 HOH FFF 12 312 215 HOH HOH . LA 6 HOH FFF 13 313 266 HOH HOH . LA 6 HOH FFF 14 314 267 HOH HOH . LA 6 HOH FFF 15 315 171 HOH HOH . LA 6 HOH FFF 16 316 221 HOH HOH . LA 6 HOH FFF 17 317 276 HOH HOH . MA 6 HOH GGG 1 301 277 HOH HOH . MA 6 HOH GGG 2 302 187 HOH HOH . MA 6 HOH GGG 3 303 257 HOH HOH . MA 6 HOH GGG 4 304 264 HOH HOH . MA 6 HOH GGG 5 305 268 HOH HOH . MA 6 HOH GGG 6 306 211 HOH HOH . MA 6 HOH GGG 7 307 168 HOH HOH . MA 6 HOH GGG 8 308 244 HOH HOH . NA 6 HOH AAA 1 201 88 HOH HOH . NA 6 HOH AAA 2 202 270 HOH HOH . NA 6 HOH AAA 3 203 159 HOH HOH . NA 6 HOH AAA 4 204 259 HOH HOH . NA 6 HOH AAA 5 205 239 HOH HOH . NA 6 HOH AAA 6 206 189 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . V 3 -2.545 16.155 43.096 1 60.55 0 C TRS 202 LLL 1 HETATM 2 C C1 TRS . . . V 3 -4.044 16.413 43.074 1 61.7 0 C1 TRS 202 LLL 1 HETATM 3 C C2 TRS . . . V 3 -2.271 14.763 43.643 1 59.47 0 C2 TRS 202 LLL 1 HETATM 4 C C3 TRS . . . V 3 -1.852 17.232 43.927 1 57.32 0 C3 TRS 202 LLL 1 HETATM 5 N N TRS . . . V 3 -2.021 16.227 41.691 1 59.09 0 N TRS 202 LLL 1 HETATM 6 O O1 TRS . . . V 3 -4.341 17.629 42.411 1 59.08 0 O1 TRS 202 LLL 1 HETATM 7 O O2 TRS . . . V 3 -2.775 14.64 44.955 1 62.51 0 O2 TRS 202 LLL 1 HETATM 8 O O3 TRS . . . V 3 -0.551 17.533 43.444 1 55.81 0 O3 TRS 202 LLL 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 8 #