data_7PXC
#
_model_server_result.job_id            rFsqtdhZhWfvWt2R26NuCg 
_model_server_result.datetime_utc      '2024-11-14 15:21:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7pxc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"TA","auth_seq_id":701}' 
#
_entry.id    7PXC 
#
_exptl.entry_id    7PXC 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7PXC 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7PXC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    36-meric 
_pdbx_struct_assembly.oligomeric_count      36 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 KA N N 
? 5 MA N N 
? 5 OA N N 
? 5 RA N N 
? 5 TA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 G OG1 THR 300 A THR 300 1_555 LA MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.514 ? 
metalc ? metalc2 KA O1G ATP . A ATP 701 1_555 LA MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.846 ? 
metalc ? metalc3 KA O2G ATP . A ATP 701 1_555 LA MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.711 ? 
metalc ? metalc4 KA O1B ATP . A ATP 701 1_555 LA MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
metalc ? metalc5 H OG1 THR 300 B THR 300 1_555 NA MG MG . B MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.478 ? 
metalc ? metalc6 MA O1G ATP . B ATP 701 1_555 NA MG MG . B MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? 
metalc ? metalc7 MA O1B ATP . B ATP 701 1_555 NA MG MG . B MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? 
metalc ? metalc8 MA O2B ATP . B ATP 701 1_555 NA MG MG . B MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.983 ? 
metalc ? metalc9 I OG1 THR 300 C THR 300 1_555 PA MG MG . C MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? 
metalc ? metalc10 OA O1B ATP . C ATP 701 1_555 PA MG MG . C MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? 
metalc ? metalc11 OA O2B ATP . C ATP 701 1_555 PA MG MG . C MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? 
metalc ? metalc12 K OG1 THR 300 E THR 300 1_555 SA MG MG . E MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? 
metalc ? metalc13 RA O1G ATP . E ATP 701 1_555 SA MG MG . E MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? 
metalc ? metalc14 RA O2B ATP . E ATP 701 1_555 SA MG MG . E MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.952 ? 
metalc ? metalc15 L OG1 THR 300 F THR 300 1_555 UA MG MG . F MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? 
metalc ? metalc16 TA O1B ATP . F ATP 701 1_555 UA MG MG . F MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 114 n n 
PG O2G ATP sing 115 n n 
PG O3G ATP sing 116 n n 
PG O3B ATP sing 117 n n 
O2G HOG2 ATP sing 118 n n 
O3G HOG3 ATP sing 119 n n 
PB O1B ATP doub 120 n n 
PB O2B ATP sing 121 n n 
PB O3B ATP sing 122 n n 
PB O3A ATP sing 123 n n 
O2B HOB2 ATP sing 124 n n 
PA O1A ATP doub 125 n n 
PA O2A ATP sing 126 n n 
PA O3A ATP sing 127 n n 
PA O5' ATP sing 128 n n 
O2A HOA2 ATP sing 129 n n 
O5' C5' ATP sing 130 n n 
C5' C4' ATP sing 131 n n 
C5' "H5'1" ATP sing 132 n n 
C5' "H5'2" ATP sing 133 n n 
C4' O4' ATP sing 134 n n 
C4' C3' ATP sing 135 n n 
C4' H4' ATP sing 136 n n 
O4' C1' ATP sing 137 n n 
C3' O3' ATP sing 138 n n 
C3' C2' ATP sing 139 n n 
C3' H3' ATP sing 140 n n 
O3' HO3' ATP sing 141 n n 
C2' O2' ATP sing 142 n n 
C2' C1' ATP sing 143 n n 
C2' H2' ATP sing 144 n n 
O2' HO2' ATP sing 145 n n 
C1' N9 ATP sing 146 n n 
C1' H1' ATP sing 147 n n 
N9 C8 ATP sing 148 n y 
N9 C4 ATP sing 149 n y 
C8 N7 ATP doub 150 n y 
C8 H8 ATP sing 151 n n 
N7 C5 ATP sing 152 n y 
C5 C6 ATP sing 153 n y 
C5 C4 ATP doub 154 n y 
C6 N6 ATP sing 155 n n 
C6 N1 ATP doub 156 n y 
N6 HN61 ATP sing 157 n n 
N6 HN62 ATP sing 158 n n 
N1 C2 ATP sing 159 n y 
C2 N3 ATP doub 160 n y 
C2 H2 ATP sing 161 n n 
N3 C4 ATP sing 162 n y 
#
_atom_sites.entry_id                     7PXC 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
KA 5 ATP A 1 701 858 ATP ATP . 
LA 6 MG A 1 702 859 MG MG . 
MA 5 ATP B 1 701 858 ATP ATP . 
NA 6 MG B 1 702 859 MG MG . 
OA 5 ATP C 1 701 858 ATP ATP . 
PA 6 MG C 1 702 859 MG MG . 
QA 7 ADP D 1 701 701 ADP ADP . 
RA 5 ATP E 1 701 858 ATP ATP . 
SA 6 MG E 1 702 859 MG MG . 
TA 5 ATP F 1 701 858 ATP ATP . 
UA 6 MG F 1 702 859 MG MG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . TA 5 218.975 242.687 131.603 1 42.8 ? PG ATP 701 F 1 
HETATM 2 O O1G ATP . . . TA 5 220.339 242.108 131.324 1 42.8 ? O1G ATP 701 F 1 
HETATM 3 O O2G ATP . . . TA 5 217.942 242.402 130.541 1 42.8 -1 O2G ATP 701 F 1 
HETATM 4 O O3G ATP . . . TA 5 218.486 242.468 133.012 1 42.8 ? O3G ATP 701 F 1 
HETATM 5 P PB ATP . . . TA 5 220.007 244.861 130.238 1 42.8 ? PB ATP 701 F 1 
HETATM 6 O O1B ATP . . . TA 5 219.442 244.228 128.991 1 42.8 -1 O1B ATP 701 F 1 
HETATM 7 O O2B ATP . . . TA 5 221.48 244.743 130.533 1 42.8 ? O2B ATP 701 F 1 
HETATM 8 O O3B ATP . . . TA 5 219.211 244.275 131.504 1 42.8 ? O3B ATP 701 F 1 
HETATM 9 P PA ATP . . . TA 5 219.675 247.215 128.83 1 42.8 ? PA ATP 701 F 1 
HETATM 10 O O1A ATP . . . TA 5 221.102 247.215 128.343 1 42.8 -1 O1A ATP 701 F 1 
HETATM 11 O O2A ATP . . . TA 5 218.595 246.652 127.941 1 42.8 ? O2A ATP 701 F 1 
HETATM 12 O O3A ATP . . . TA 5 219.638 246.425 130.23 1 42.8 ? O3A ATP 701 F 1 
HETATM 13 O O5' ATP . . . TA 5 219.283 248.727 129.212 1 42.8 ? O5' ATP 701 F 1 
HETATM 14 C C5' ATP . . . TA 5 218.005 249.03 129.759 1 42.8 ? C5' ATP 701 F 1 
HETATM 15 C C4' ATP . . . TA 5 217.584 250.416 129.29 1 42.8 ? C4' ATP 701 F 1 
HETATM 16 O O4' ATP . . . TA 5 218.387 251.441 129.879 1 42.8 ? O4' ATP 701 F 1 
HETATM 17 C C3' ATP . . . TA 5 217.738 250.566 127.785 1 42.8 ? C3' ATP 701 F 1 
HETATM 18 O O3' ATP . . . TA 5 216.46 250.484 127.152 1 42.8 ? O3' ATP 701 F 1 
HETATM 19 C C2' ATP . . . TA 5 218.332 251.943 127.572 1 42.8 ? C2' ATP 701 F 1 
HETATM 20 O O2' ATP . . . TA 5 217.456 252.738 126.772 1 42.8 ? O2' ATP 701 F 1 
HETATM 21 C C1' ATP . . . TA 5 218.46 252.537 128.965 1 42.8 ? C1' ATP 701 F 1 
HETATM 22 N N9 ATP . . . TA 5 219.728 253.298 129.085 1 42.8 ? N9 ATP 701 F 1 
HETATM 23 C C8 ATP . . . TA 5 220.128 254.27 128.246 1 42.8 ? C8 ATP 701 F 1 
HETATM 24 N N7 ATP . . . TA 5 221.323 254.788 128.622 1 42.8 ? N7 ATP 701 F 1 
HETATM 25 C C5 ATP . . . TA 5 221.705 254.138 129.734 1 42.8 ? C5 ATP 701 F 1 
HETATM 26 C C6 ATP . . . TA 5 222.868 254.192 130.645 1 42.8 ? C6 ATP 701 F 1 
HETATM 27 N N6 ATP . . . TA 5 223.88 255.063 130.433 1 42.8 ? N6 ATP 701 F 1 
HETATM 28 N N1 ATP . . . TA 5 222.883 253.343 131.694 1 42.8 ? N1 ATP 701 F 1 
HETATM 29 C C2 ATP . . . TA 5 221.879 252.474 131.912 1 42.8 ? C2 ATP 701 F 1 
HETATM 30 N N3 ATP . . . TA 5 220.795 252.37 131.125 1 42.8 ? N3 ATP 701 F 1 
HETATM 31 C C4 ATP . . . TA 5 220.648 253.163 130.04 1 42.8 ? C4 ATP 701 F 1 
#
_model_server_stats.io_time_ms              41 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    196 
_model_server_stats.query_time_ms           403 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           31 
#