data_7PYC # _model_server_result.job_id XdaotazrkZkzlDHa0Y5wXw _model_server_result.datetime_utc '2024-11-28 16:20:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7pyc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":802}' # _entry.id 7PYC # _exptl.entry_id 7PYC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Guanidinium _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7PYC _cell.length_a 50.462 _cell.length_b 69.329 _cell.length_c 118.132 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PYC _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -50.462 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C H6 N3 1' _chem_comp.formula_weight 60.078 _chem_comp.id GZ6 _chem_comp.mon_nstd_flag . _chem_comp.name Guanidinium _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C GZ6 doub 143 n n C N3 GZ6 sing 144 n n C N2 GZ6 sing 145 n n N1 H1 GZ6 sing 146 n n N2 H2 GZ6 sing 147 n n N2 H3 GZ6 sing 148 n n N3 H4 GZ6 sing 149 n n N3 H5 GZ6 sing 150 n n N1 H6 GZ6 sing 151 n n # _atom_sites.entry_id 7PYC _atom_sites.fract_transf_matrix[1][1] 0.019817 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014424 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008465 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 2AP A 1 801 7 2AP 2AP . C 3 GZ6 A 1 802 2 GZ6 GZ6 . D 4 HOH A 1 901 1 HOH HOH . D 4 HOH A 2 902 5 HOH HOH . D 4 HOH A 3 903 10 HOH HOH . D 4 HOH A 4 904 6 HOH HOH . D 4 HOH A 5 905 8 HOH HOH . D 4 HOH A 6 906 11 HOH HOH . D 4 HOH A 7 907 12 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C GZ6 . . . C 3 -28.003 -16.874 -32.447 1 71.48 ? C GZ6 802 A 1 HETATM 2 N N1 GZ6 . . . C 3 -28.908 -17.368 -33.31 1 76.39 ? N1 GZ6 802 A 1 HETATM 3 N N2 GZ6 . . . C 3 -26.733 -16.834 -32.945 1 70.85 ? N2 GZ6 802 A 1 HETATM 4 N N3 GZ6 . . . C 3 -28.36 -16.496 -31.257 1 67.39 ? N3 GZ6 802 A 1 HETATM 5 H H1 GZ6 . . . C 3 -29.881 -17.437 -33.029 1 92 ? H1 GZ6 802 A 1 HETATM 6 H H2 GZ6 . . . C 3 -26.469 -17.141 -33.875 1 85.35 ? H2 GZ6 802 A 1 HETATM 7 H H3 GZ6 . . . C 3 -25.924 -16.493 -32.435 1 85.35 ? H3 GZ6 802 A 1 HETATM 8 H H4 GZ6 . . . C 3 -27.628 -16.134 -30.655 1 81.2 ? H4 GZ6 802 A 1 HETATM 9 H H6 GZ6 . . . C 3 -28.608 -17.665 -34.233 1 92 ? H6 GZ6 802 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 9 #