data_7PYM
#
_model_server_result.job_id            9C65uJyqpe6hi6fK5JvwTA 
_model_server_result.datetime_utc      '2024-11-24 11:59:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7pym 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    7PYM 
#
_exptl.entry_id    7PYM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              63.546 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'COPPER (II) ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7PYM 
_cell.length_a            48.86 
_cell.length_b            48.86 
_cell.length_c            108.96 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7PYM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        76 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 41 A CYS 41 1_555 A SG CYS 167 A CYS 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
metalc ? metalc1 A N HIS 1 A HIS 1 1_555 B CU CU . A CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? 
metalc ? metalc2 A ND1 HIS 1 A HIS 1 1_555 B CU CU . A CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
metalc ? metalc3 A NE2 HIS 78 A HIS 78 1_555 B CU CU . A CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
metalc ? metalc4 A OH TYR 164 A TYR 164 1_555 B CU CU . A CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.675 ? 
metalc ? metalc5 B CU CU . A CU 301 1_555 G O HOH . A HOH 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? 
metalc ? metalc6 B CU CU . A CU 301 1_555 G O HOH . A HOH 623 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.463 ? 
#
_chem_comp.formula           'Cu 2' 
_chem_comp.formula_weight    63.546 
_chem_comp.id                CU 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'COPPER (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7PYM 
_atom_sites.fract_transf_matrix[1][1]    0.020467 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020467 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009178 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CU A 1 301 301 CU CU . 
C 3 SO4 A 1 302 1 SO4 SO4 . 
D 3 SO4 A 1 303 2 SO4 SO4 . 
E 3 SO4 A 1 304 3 SO4 SO4 . 
F 3 SO4 A 1 305 4 SO4 SO4 . 
G 4 HOH A 1 401 218 HOH HOH . 
G 4 HOH A 2 402 224 HOH HOH . 
G 4 HOH A 3 403 170 HOH HOH . 
G 4 HOH A 4 404 211 HOH HOH . 
G 4 HOH A 5 405 150 HOH HOH . 
G 4 HOH A 6 406 98 HOH HOH . 
G 4 HOH A 7 407 156 HOH HOH . 
G 4 HOH A 8 408 242 HOH HOH . 
G 4 HOH A 9 409 217 HOH HOH . 
G 4 HOH A 10 410 216 HOH HOH . 
G 4 HOH A 11 411 93 HOH HOH . 
G 4 HOH A 12 412 232 HOH HOH . 
G 4 HOH A 13 413 20 HOH HOH . 
G 4 HOH A 14 414 201 HOH HOH . 
G 4 HOH A 15 415 6 HOH HOH . 
G 4 HOH A 16 416 100 HOH HOH . 
G 4 HOH A 17 417 65 HOH HOH . 
G 4 HOH A 18 418 140 HOH HOH . 
G 4 HOH A 19 419 88 HOH HOH . 
G 4 HOH A 20 420 243 HOH HOH . 
G 4 HOH A 21 421 54 HOH HOH . 
G 4 HOH A 22 422 5 HOH HOH . 
G 4 HOH A 23 423 222 HOH HOH . 
G 4 HOH A 24 424 117 HOH HOH . 
G 4 HOH A 25 425 121 HOH HOH . 
G 4 HOH A 26 426 254 HOH HOH . 
G 4 HOH A 27 427 14 HOH HOH . 
G 4 HOH A 28 428 68 HOH HOH . 
G 4 HOH A 29 429 124 HOH HOH . 
G 4 HOH A 30 430 227 HOH HOH . 
G 4 HOH A 31 431 2 HOH HOH . 
G 4 HOH A 32 432 27 HOH HOH . 
G 4 HOH A 33 433 30 HOH HOH . 
G 4 HOH A 34 434 1 HOH HOH . 
G 4 HOH A 35 435 123 HOH HOH . 
G 4 HOH A 36 436 86 HOH HOH . 
G 4 HOH A 37 437 99 HOH HOH . 
G 4 HOH A 38 438 58 HOH HOH . 
G 4 HOH A 39 439 182 HOH HOH . 
G 4 HOH A 40 440 11 HOH HOH . 
G 4 HOH A 41 441 164 HOH HOH . 
G 4 HOH A 42 442 33 HOH HOH . 
G 4 HOH A 43 443 95 HOH HOH . 
G 4 HOH A 44 444 23 HOH HOH . 
G 4 HOH A 45 445 193 HOH HOH . 
G 4 HOH A 46 446 241 HOH HOH . 
G 4 HOH A 47 447 41 HOH HOH . 
G 4 HOH A 48 448 91 HOH HOH . 
G 4 HOH A 49 449 60 HOH HOH . 
G 4 HOH A 50 450 47 HOH HOH . 
G 4 HOH A 51 451 198 HOH HOH . 
G 4 HOH A 52 452 62 HOH HOH . 
G 4 HOH A 53 453 138 HOH HOH . 
G 4 HOH A 54 454 187 HOH HOH . 
G 4 HOH A 55 455 176 HOH HOH . 
G 4 HOH A 56 456 207 HOH HOH . 
G 4 HOH A 57 457 238 HOH HOH . 
G 4 HOH A 58 458 107 HOH HOH . 
G 4 HOH A 59 459 173 HOH HOH . 
G 4 HOH A 60 460 71 HOH HOH . 
G 4 HOH A 61 461 64 HOH HOH . 
G 4 HOH A 62 462 97 HOH HOH . 
G 4 HOH A 63 463 84 HOH HOH . 
G 4 HOH A 64 464 32 HOH HOH . 
G 4 HOH A 65 465 158 HOH HOH . 
G 4 HOH A 66 466 147 HOH HOH . 
G 4 HOH A 67 467 42 HOH HOH . 
G 4 HOH A 68 468 72 HOH HOH . 
G 4 HOH A 69 469 39 HOH HOH . 
G 4 HOH A 70 470 48 HOH HOH . 
G 4 HOH A 71 471 153 HOH HOH . 
G 4 HOH A 72 472 40 HOH HOH . 
G 4 HOH A 73 473 34 HOH HOH . 
G 4 HOH A 74 474 79 HOH HOH . 
G 4 HOH A 75 475 44 HOH HOH . 
G 4 HOH A 76 476 7 HOH HOH . 
G 4 HOH A 77 477 10 HOH HOH . 
G 4 HOH A 78 478 49 HOH HOH . 
G 4 HOH A 79 479 75 HOH HOH . 
G 4 HOH A 80 480 136 HOH HOH . 
G 4 HOH A 81 481 55 HOH HOH . 
G 4 HOH A 82 482 13 HOH HOH . 
G 4 HOH A 83 483 66 HOH HOH . 
G 4 HOH A 84 484 26 HOH HOH . 
G 4 HOH A 85 485 35 HOH HOH . 
G 4 HOH A 86 486 8 HOH HOH . 
G 4 HOH A 87 487 208 HOH HOH . 
G 4 HOH A 88 488 233 HOH HOH . 
G 4 HOH A 89 489 171 HOH HOH . 
G 4 HOH A 90 490 210 HOH HOH . 
G 4 HOH A 91 491 220 HOH HOH . 
G 4 HOH A 92 492 174 HOH HOH . 
G 4 HOH A 93 493 53 HOH HOH . 
G 4 HOH A 94 494 82 HOH HOH . 
G 4 HOH A 95 495 70 HOH HOH . 
G 4 HOH A 96 496 189 HOH HOH . 
G 4 HOH A 97 497 3 HOH HOH . 
G 4 HOH A 98 498 12 HOH HOH . 
G 4 HOH A 99 499 38 HOH HOH . 
G 4 HOH A 100 500 165 HOH HOH . 
G 4 HOH A 101 501 28 HOH HOH . 
G 4 HOH A 102 502 162 HOH HOH . 
G 4 HOH A 103 503 45 HOH HOH . 
G 4 HOH A 104 504 4 HOH HOH . 
G 4 HOH A 105 505 29 HOH HOH . 
G 4 HOH A 106 506 251 HOH HOH . 
G 4 HOH A 107 507 114 HOH HOH . 
G 4 HOH A 108 508 115 HOH HOH . 
G 4 HOH A 109 509 43 HOH HOH . 
G 4 HOH A 110 510 52 HOH HOH . 
G 4 HOH A 111 511 183 HOH HOH . 
G 4 HOH A 112 512 31 HOH HOH . 
G 4 HOH A 113 513 134 HOH HOH . 
G 4 HOH A 114 514 36 HOH HOH . 
G 4 HOH A 115 515 15 HOH HOH . 
G 4 HOH A 116 516 194 HOH HOH . 
G 4 HOH A 117 517 56 HOH HOH . 
G 4 HOH A 118 518 25 HOH HOH . 
G 4 HOH A 119 519 61 HOH HOH . 
G 4 HOH A 120 520 21 HOH HOH . 
G 4 HOH A 121 521 83 HOH HOH . 
G 4 HOH A 122 522 172 HOH HOH . 
G 4 HOH A 123 523 85 HOH HOH . 
G 4 HOH A 124 524 78 HOH HOH . 
G 4 HOH A 125 525 184 HOH HOH . 
G 4 HOH A 126 526 148 HOH HOH . 
G 4 HOH A 127 527 145 HOH HOH . 
G 4 HOH A 128 528 160 HOH HOH . 
G 4 HOH A 129 529 223 HOH HOH . 
G 4 HOH A 130 530 108 HOH HOH . 
G 4 HOH A 131 531 92 HOH HOH . 
G 4 HOH A 132 532 37 HOH HOH . 
G 4 HOH A 133 533 89 HOH HOH . 
G 4 HOH A 134 534 133 HOH HOH . 
G 4 HOH A 135 535 19 HOH HOH . 
G 4 HOH A 136 536 76 HOH HOH . 
G 4 HOH A 137 537 126 HOH HOH . 
G 4 HOH A 138 538 102 HOH HOH . 
G 4 HOH A 139 539 120 HOH HOH . 
G 4 HOH A 140 540 24 HOH HOH . 
G 4 HOH A 141 541 73 HOH HOH . 
G 4 HOH A 142 542 139 HOH HOH . 
G 4 HOH A 143 543 151 HOH HOH . 
G 4 HOH A 144 544 118 HOH HOH . 
G 4 HOH A 145 545 101 HOH HOH . 
G 4 HOH A 146 546 59 HOH HOH . 
G 4 HOH A 147 547 106 HOH HOH . 
G 4 HOH A 148 548 257 HOH HOH . 
G 4 HOH A 149 549 63 HOH HOH . 
G 4 HOH A 150 550 51 HOH HOH . 
G 4 HOH A 151 551 219 HOH HOH . 
G 4 HOH A 152 552 57 HOH HOH . 
G 4 HOH A 153 553 195 HOH HOH . 
G 4 HOH A 154 554 96 HOH HOH . 
G 4 HOH A 155 555 87 HOH HOH . 
G 4 HOH A 156 556 67 HOH HOH . 
G 4 HOH A 157 557 104 HOH HOH . 
G 4 HOH A 158 558 16 HOH HOH . 
G 4 HOH A 159 559 113 HOH HOH . 
G 4 HOH A 160 560 200 HOH HOH . 
G 4 HOH A 161 561 50 HOH HOH . 
G 4 HOH A 162 562 18 HOH HOH . 
G 4 HOH A 163 563 74 HOH HOH . 
G 4 HOH A 164 564 213 HOH HOH . 
G 4 HOH A 165 565 152 HOH HOH . 
G 4 HOH A 166 566 119 HOH HOH . 
G 4 HOH A 167 567 17 HOH HOH . 
G 4 HOH A 168 568 255 HOH HOH . 
G 4 HOH A 169 569 94 HOH HOH . 
G 4 HOH A 170 570 163 HOH HOH . 
G 4 HOH A 171 571 146 HOH HOH . 
G 4 HOH A 172 572 212 HOH HOH . 
G 4 HOH A 173 573 90 HOH HOH . 
G 4 HOH A 174 574 142 HOH HOH . 
G 4 HOH A 175 575 167 HOH HOH . 
G 4 HOH A 176 576 77 HOH HOH . 
G 4 HOH A 177 577 116 HOH HOH . 
G 4 HOH A 178 578 188 HOH HOH . 
G 4 HOH A 179 579 261 HOH HOH . 
G 4 HOH A 180 580 131 HOH HOH . 
G 4 HOH A 181 581 46 HOH HOH . 
G 4 HOH A 182 582 221 HOH HOH . 
G 4 HOH A 183 583 80 HOH HOH . 
G 4 HOH A 184 584 22 HOH HOH . 
G 4 HOH A 185 585 206 HOH HOH . 
G 4 HOH A 186 586 190 HOH HOH . 
G 4 HOH A 187 587 245 HOH HOH . 
G 4 HOH A 188 588 253 HOH HOH . 
G 4 HOH A 189 589 179 HOH HOH . 
G 4 HOH A 190 590 191 HOH HOH . 
G 4 HOH A 191 591 215 HOH HOH . 
G 4 HOH A 192 592 175 HOH HOH . 
G 4 HOH A 193 593 9 HOH HOH . 
G 4 HOH A 194 594 260 HOH HOH . 
G 4 HOH A 195 595 161 HOH HOH . 
G 4 HOH A 196 596 239 HOH HOH . 
G 4 HOH A 197 597 135 HOH HOH . 
G 4 HOH A 198 598 112 HOH HOH . 
G 4 HOH A 199 599 149 HOH HOH . 
G 4 HOH A 200 600 205 HOH HOH . 
G 4 HOH A 201 601 240 HOH HOH . 
G 4 HOH A 202 602 199 HOH HOH . 
G 4 HOH A 203 603 103 HOH HOH . 
G 4 HOH A 204 604 141 HOH HOH . 
G 4 HOH A 205 605 144 HOH HOH . 
G 4 HOH A 206 606 225 HOH HOH . 
G 4 HOH A 207 607 105 HOH HOH . 
G 4 HOH A 208 608 137 HOH HOH . 
G 4 HOH A 209 609 185 HOH HOH . 
G 4 HOH A 210 610 155 HOH HOH . 
G 4 HOH A 211 611 159 HOH HOH . 
G 4 HOH A 212 612 204 HOH HOH . 
G 4 HOH A 213 613 214 HOH HOH . 
G 4 HOH A 214 614 143 HOH HOH . 
G 4 HOH A 215 615 249 HOH HOH . 
G 4 HOH A 216 616 168 HOH HOH . 
G 4 HOH A 217 617 235 HOH HOH . 
G 4 HOH A 218 618 247 HOH HOH . 
G 4 HOH A 219 619 169 HOH HOH . 
G 4 HOH A 220 620 81 HOH HOH . 
G 4 HOH A 221 621 127 HOH HOH . 
G 4 HOH A 222 622 244 HOH HOH . 
G 4 HOH A 223 623 157 HOH HOH . 
G 4 HOH A 224 624 196 HOH HOH . 
G 4 HOH A 225 625 178 HOH HOH . 
G 4 HOH A 226 626 258 HOH HOH . 
G 4 HOH A 227 627 202 HOH HOH . 
G 4 HOH A 228 628 259 HOH HOH . 
G 4 HOH A 229 629 248 HOH HOH . 
G 4 HOH A 230 630 234 HOH HOH . 
G 4 HOH A 231 631 122 HOH HOH . 
G 4 HOH A 232 632 186 HOH HOH . 
G 4 HOH A 233 633 111 HOH HOH . 
G 4 HOH A 234 634 209 HOH HOH . 
G 4 HOH A 235 635 180 HOH HOH . 
G 4 HOH A 236 636 110 HOH HOH . 
G 4 HOH A 237 637 128 HOH HOH . 
G 4 HOH A 238 638 230 HOH HOH . 
G 4 HOH A 239 639 231 HOH HOH . 
G 4 HOH A 240 640 197 HOH HOH . 
G 4 HOH A 241 641 256 HOH HOH . 
G 4 HOH A 242 642 203 HOH HOH . 
G 4 HOH A 243 643 109 HOH HOH . 
G 4 HOH A 244 644 69 HOH HOH . 
G 4 HOH A 245 645 181 HOH HOH . 
G 4 HOH A 246 646 229 HOH HOH . 
G 4 HOH A 247 647 192 HOH HOH . 
G 4 HOH A 248 648 129 HOH HOH . 
G 4 HOH A 249 649 177 HOH HOH . 
G 4 HOH A 250 650 226 HOH HOH . 
G 4 HOH A 251 651 246 HOH HOH . 
G 4 HOH A 252 652 228 HOH HOH . 
G 4 HOH A 253 653 125 HOH HOH . 
G 4 HOH A 254 654 166 HOH HOH . 
G 4 HOH A 255 655 237 HOH HOH . 
G 4 HOH A 256 656 252 HOH HOH . 
G 4 HOH A 257 657 236 HOH HOH . 
G 4 HOH A 258 658 250 HOH HOH . 
G 4 HOH A 259 659 154 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CU 
_atom_site.label_atom_id         CU 
_atom_site.label_comp_id         CU 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -15.37 
_atom_site.Cartn_y               2.518 
_atom_site.Cartn_z               -0.917 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        18.79 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CU 
_atom_site.auth_comp_id          CU 
_atom_site.auth_seq_id           301 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           33 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           343 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#